KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:47 2014 Check: 00 .. Name: ENSTTRP00000015768/1-892 Len: 1046 Check: 6795 Weight: 1.00 Name: ENSP00000404121/1-898 Len: 1046 Check: 5392 Weight: 1.00 Name: BACU002491/1-1004 Len: 1046 Check: 3709 Weight: 1.00 Name: bmy_13736T0/1-962 Len: 1046 Check: 1203 Weight: 1.00 Name: ENSBTAP00000018818/1-894 Len: 1046 Check: 9754 Weight: 1.00 // 1 50 ENSTTRP00000015768/1-892 ---------- ---------- ---------- ---------- ---------- ENSP00000404121/1-898 ---------- ---------- ---------- ---------- ---------- BACU002491/1-1004 MTSWVSILYG ENMDKEGRAE NLLPNSSWWM AYRDEADFSL LLQHLTILSE bmy_13736T0/1-962 MLRVLAVKTA DGNLAAGHTT E--------- ---------- ---------- ENSBTAP00000018818/1-894 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015768/1-892 ---------- MRPVRIFVND DRHVMAKHSS VYPTQEELEA VQNMVSHTER ENSP00000404121/1-898 ---------- MRPMRIFVND DRHVMAKHSS VYPTQEELEA VQNMVSHTER BACU002491/1-1004 ATSFPPTLLF RRPVRIFVND DRHVMAKHSS VYPTQEELEA VQNMVSHTER bmy_13736T0/1-962 ------KEVK MRPVRIFVND DRHVMAKHSS VYPTQEELEA VQNMVSHTER ENSBTAP00000018818/1-894 ---------- MRPVRIFVND DRHVMAKHSS VYPTQEELEA VQNMVSHTER 101 150 ENSTTRP00000015768/1-892 ALKAVSDWID EQEKGSGDHA ESENVDVPPE DETKEGAGEQ KAEHVTRTLR ENSP00000404121/1-898 ALKAVSDWID EQEKGSSEQA ESDNMDVPPE DDSKEGAGEQ KTEHMTRTLR BACU002491/1-1004 ALKAVSDWID EQEKGSGDHA ESENMDVPPE DETKEGAGEQ KSEHVTRTLR bmy_13736T0/1-962 ALKAVSDWID EQEKGSGDHA ESENMDVPPE DETKEGAGEQ KSEHVTRTLR ENSBTAP00000018818/1-894 ALKAVSDWID EQEKGSSDHA ESENVDVPAE DEGKEGAGEQ KTEHMTRTLR 151 200 ENSTTRP00000015768/1-892 GVMRXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ENSP00000404121/1-898 GVMRVGLVAK GLLLKGDLDL ELVLLCKEKP TTALLDKVAD NLAIQLA--- BACU002491/1-1004 GVMRVGLVAK GLLLKGDLDL ELVLLCKEKP TTALLDKVAD NLAIQLAVTG bmy_13736T0/1-962 GVMRVGLVAK GLLLKGDLDL ELVLLCKEKP TTALLDKVAD NLAIQLA--- ENSBTAP00000018818/1-894 GVMRVGLVAK GLLLKGDLDL ELVLLCKEKP TTALLDKVAD NLAIQLT--- 201 250 ENSTTRP00000015768/1-892 ---------- ---------- ---------- ---------- ----AVTDDK ENSP00000404121/1-898 ---------- ---------- ---------- ---------- ----AVTEDK BACU002491/1-1004 RTLQSHPDAL AAKKGPVPAM HKAALFLGRT GHDLHIQTPV MDGRAVTDDK bmy_13736T0/1-962 ---------- ---------- ---------- ---------- ----AVTDDK ENSBTAP00000018818/1-894 ---------- ---------- ---------- ---------- ----AVTDDK 251 300 ENSTTRP00000015768/1-892 YEILQSVDDA AIVIKNTKEP PLSLTIHLTS PVVREEMEKV LAG--ETLSV ENSP00000404121/1-898 YEILQSVDDA AIVIKNTKEP PLSLTIHLTS PVVREEMEKV LAG--ETLSV BACU002491/1-1004 YEILQSVDDA AIVIKNTKEP PLSLTIHLTS PVVREEMEKV LAG--ETLSV bmy_13736T0/1-962 YEILQSVDDA AIVIKNTKEP PLSLTIHLTS PVVREEMEKV LAG--ETLSV ENSBTAP00000018818/1-894 YEILQSVDDA AIVIKNTKEP PLSLTIHLTS PVVREEMEKV LAGGIETLSV 301 350 ENSTTRP00000015768/1-892 NDPPDVLDRQ KCLAALASLR HAKWFQARAN GLKSCVIVIR VLRDLCTRVP ENSP00000404121/1-898 NDPPDVLDRQ KCLAALASLR HAKWFQARAN GLKSCVIVIR VLRDLCTRVP BACU002491/1-1004 NDPPDVLDRQ KCLAALASLR HAKWFQARAN GLKSCVIVIR VLRDLCTRVP bmy_13736T0/1-962 NDPPDVLDRQ KCLAALASLR HAKWFQARAN GLKSCVIVIR VLRDLCTRVP ENSBTAP00000018818/1-894 NDPPDVLDRQ KCLAALASLR HAKWFQARAN GLKSCVIVIR VLRDLCTRVP 351 400 ENSTTRP00000015768/1-892 TWGPLRGWXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXGSGI ENSP00000404121/1-898 TWGPLRGWPL ELLCEKSIGT ANRPMGAGEA LRRVLECLAS GIVMPDGSGI BACU002491/1-1004 TWGPLRGWPL ELLCEKSIGT ANRPMGAGEA LRRVLECLAS GIVMPDGSGI bmy_13736T0/1-962 TWGPLRGWPL ELLCEKSIGT ANRPMGAGEA LRRVLECLAS GIVMPDGSGI ENSBTAP00000018818/1-894 TWGPLRGWPL ELLCEKSIGT ANRPMGAGEA LRRVLECLAS GIVMPDGSGI 401 450 ENSTTRP00000015768/1-892 YDPCEKEATD AIGHLDRQQR EDITQSAQHA LRLAAFGQLH KVLGMDPLPS ENSP00000404121/1-898 YDPCEKEATD AIGHLDRQQR EDITQSAQHA LRLAAFGQLH KVLGMDPLPS BACU002491/1-1004 YDPCEKEATD AIGHLDRQQR EDITQSAQHA LRLAAFGQLH KVLGMDPLPS bmy_13736T0/1-962 YDPCEKEATD AIGHLDRQQR EDITQSAQHA LRLAAFGQLH KVLGMDPLPS ENSBTAP00000018818/1-894 YDPCEKEATD AIGHLDRQQR E---ISHRHA LRLAAFGQLH KVLGMDPLPS 451 500 ENSTTRP00000015768/1-892 KMPKKPKNEN PVDYTVQIPP STTYAITPMK RPMEEDGEEK SPSKKKKKIQ ENSP00000404121/1-898 KMPKKPKNEN PVDYTVQIPP STTYAITPMK RPMEEDGEEK SPSKKKKKIQ BACU002491/1-1004 KMPKKPKNEN PVDYTVQIPP STTYAITPMK RPMEEDGEEK SPSKKKKKIQ bmy_13736T0/1-962 KMPKKPKNEN PVDYTVQIPP STTYAITPMK RPMEEDGEEK SPSKKKKKIQ ENSBTAP00000018818/1-894 KMPKKPKNEN PVDYTVQIPP STTYAITPMK RPMEEDGEEK SPSKKKKKIQ 501 550 ENSTTRP00000015768/1-892 KKEEKAEPPQ AMNALMRLNQ LKPGLQYKLV SQTGPVHAPI FTMSVEVDGN ENSP00000404121/1-898 KKEEKAEPPQ AMNALMRLNQ LKPGLQYKLV SQTGPVHAPI FTMSVEVDGN BACU002491/1-1004 KKEEKAEPPQ AMNALMRLNQ LKPGLQYKLV SQTGPVHAPI FTMSVEVDGN bmy_13736T0/1-962 KKEEKAEPPQ AMNALMRLNQ LKPGLQYKLV SQTGPVHAPI FTMSVEVDGN ENSBTAP00000018818/1-894 KKEEKAEPPQ AMNALMRLNQ LKPGLQYKLI SQTGPVHAPI FTMSVEVDGS 551 600 ENSTTRP00000015768/1-892 SFEASGPSKK TAKLHVAVKV LQDMGLPTGA EGRDSSKGED SAEETEAKPA ENSP00000404121/1-898 SFEASGPSKK TAKLHVAVKV LQDMGLPTGA EGRDSSKGED SAEETEAKPA BACU002491/1-1004 SFEASGPSKK TAKLHVAVKV LQDMGLPTGA EGRDSSKGED SAEETEAKPA bmy_13736T0/1-962 SFEASGPSKK TAKLHVAVKV LQDMGLPTGA EGRDSSKGED SAEETEAKPA ENSBTAP00000018818/1-894 SFEASGPSKK TAKLHVAVKV LQDMGLPTGA EGRDSSKGED SAEETEAKPA 601 650 ENSTTRP00000015768/1-892 VVAPPPVVEA VSTPSAAFPS DPTAE----Q GPILTKHGKN PVMELNEKRR ENSP00000404121/1-898 VVAPAPVVEA VSTPSAAFPS DATAENVKQQ GPILTKHGKN PVMELNEKRR BACU002491/1-1004 VVAPPPVVEA VSTPSAAFPS DPTAE----Q GPILTKHGKN PVMELNEKRR bmy_13736T0/1-962 VVAPPPVVEA VSTPSAAFPS DPTAENVKQQ GPILTKHGKN PVMELNEKRR ENSBTAP00000018818/1-894 VVAPPPVVET VSTPSAAFPS DPTTE----Q GPILTKHGKN PVMELNEKRR 651 700 ENSTTRP00000015768/1-892 GLKYELISET GGSHDKRFVM E--------- ---------- ---------- ENSP00000404121/1-898 GLKYELISET GGSHDKRFVM E--------- ---------- ---------- BACU002491/1-1004 GLKYELISET GGSHDKRFVM E--------- ---------- ---------- bmy_13736T0/1-962 GLKYELISET GGSHDKRFVM EVSGPGGGSC GGLESLESPP RPKGGVGSPQ ENSBTAP00000018818/1-894 GLKYELISET GGSHDKRFVM E--------- ---------- ---------- 701 750 ENSTTRP00000015768/1-892 -------VEV DGQKFQGAGS NKKVAKAYAA LAALEKLFPD APLALEANKK ENSP00000404121/1-898 -------VEV DGQKFQGAGS NKKVAKAYAA LAALEKLFPD TPLALDANKK BACU002491/1-1004 -------VEV DGQKFQGAGS NKKVAKAYAA LAALEKLFPD APLALEANKK bmy_13736T0/1-962 TRMCSSQVEV DGQKFQGAGS NKKVAKAYAA LAALEKLFPD APLALEANKK ENSBTAP00000018818/1-894 -------VEV DGQKFQGAGS NKKVAKAYAA LAALEKLFPD APLSLEANKK 751 800 ENSTTRP00000015768/1-892 KRAPVPVRGG PKFAAKPHNP GFGMGGPMHN EVPPPPNLRG RGRGGNIRGR ENSP00000404121/1-898 KRAPVPVRGG PKFAAKPHNP GFGMGGPMHN EVPPPPNLRG RGRGGSIRGR BACU002491/1-1004 KRAPVPVRGG PKFAAKPHNP GFGMGGPMHN EVPPPPNLRG RGRGGNIRGR bmy_13736T0/1-962 KRAPVPVRGG PKFAAKPHNP GFGMGGPMHN EVPPPPNLRG RGRGGNIRGR ENSBTAP00000018818/1-894 KRAPVPVRGG PKFAAKPHNP GFGMGGPMHN EVPPPPNLRG RGRGGNIRGR 801 850 ENSTTRP00000015768/1-892 GRGRGFGGAN HGGYMNAGAG YGSYGYGGNS ATAGYSQFYS NGGHSGNAGG ENSP00000404121/1-898 GRGRGFGGAN HGGYMNAGAG YGSYGYGGNS ATAGYSQFYS NGGHSGNASG BACU002491/1-1004 GRGRGFGGAN HGGYMNAGAG YGSYGYGGNS ATAGYSQFYS NGGHSGNAGG bmy_13736T0/1-962 GRGRGFGGAN HGGYMNAGAG YGSYGYGGNS ATAGYSQFYS NGGHSGNAGG ENSBTAP00000018818/1-894 GRGRGFGGAN HGGYMNAGAG YGSYGYGGNS ATAGYSQFYS NGGHSGNAGG 851 900 ENSTTRP00000015768/1-892 GGGGGGGGGS SGYGSYYQCD NYNSPVPPKH AGKKQPHGGQ Q-PSYGSGYQ ENSP00000404121/1-898 -GGGGGGGGS SGYGSYYQGD NYNSPVPPKH AGKKQPHGGQ QKPSYGSGYQ BACU002491/1-1004 GGGGGGGGGS SGYGSYYQGD NYNSPVPPKH AGKKQPHGGQ QKPSYGSGYQ bmy_13736T0/1-962 GGGGGGGGGS SGYGSYYQGD NYNSPVPPKH AGKKQPHGGQ QKPSYGSGYQ ENSBTAP00000018818/1-894 -GGGGGGGGS SGYGSYYQGD NYNSPVPPKH AGKKQPHGGQ QKPSYGSGYQ 901 950 ENSTTRP00000015768/1-892 SHQGQQQSY- QSQYS-YCPP Q-QQKGYNHG XXXX-XXXXX XXXXXXXXXX ENSP00000404121/1-898 SHQGQQQSYN QSPYSNYGPP QGKQKGYNHG QGSY-SYSNS YNSPGGGGGS BACU002491/1-1004 SHQGQQQSYN QGQYSNYGPP QGKQKGYNHG QGNYSSYSNS YSSPGGGGGS bmy_13736T0/1-962 SHQGQQQSYN QGQYSNYGPP QGKQKGYNHG QGNYSSYSNS YSSPGGGGGS ENSBTAP00000018818/1-894 PHQGQQQSYS QSQYSNYGPP QGKQKGYNHG QGNYSSYSNS YGSPGGGGGS 951 1000 ENSTTRP00000015768/1-892 XXXXXXXXXY SGSGGRSGGN SYGSGGSSYN PGSHGGYGGG SGGGSSYQGK ENSP00000404121/1-898 DYNYESKFNY SGSGGRSGGN SYGSGGASYN PGSHGGYGGG SGGGSSYQGK BACU002491/1-1004 DYSYESKFNY SGSGGRSGGN SYGSGGSSYN PGSHGGYGGG SGGGSSYQGK bmy_13736T0/1-962 DYSYESKFNY SGSGGRSGGN SYGSGGSSYN PGSHGGYGGG SGGGSSYQGK ENSBTAP00000018818/1-894 DYSYESKFNY SGSGGRSGGN SYGSGGSSYN PGSHGGY-GG SGGSSSYQGK 1001 1050 ENSTTRP00000015768/1-892 QGGYSSQSNY NSPGSSQNYS GPPSSYQSSQ GGYGRNADHS MNYQYR ENSP00000404121/1-898 QGGY-SQSNY NSPGSGQNYS GPPSSYQSSQ GGYGRNADHS MNYQYR BACU002491/1-1004 QGGYSSQSNY SSPGSSQNYS GPPSSYQSSQ GGYGRNADHS MNYQYR bmy_13736T0/1-962 QGGYSSQSNY SSPGSSQNYS GPPSSYQSSQ GGYGRNADHS MNYQYR ENSBTAP00000018818/1-894 QGGYSSQSNY NSPGSGQNYS GPPSSYQSSQ GGYGRNADHS MNYQYR