KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:47 2014 Check: 00 .. Name: ENSP00000319412/1-343 Len: 401 Check: 6238 Weight: 1.00 Name: ENSBTAP00000018822/1-307 Len: 401 Check: 551 Weight: 1.00 Name: ENSTTRP00000010861/1-329 Len: 401 Check: 7064 Weight: 1.00 Name: bmy_17057T0/1-269 Len: 401 Check: 8892 Weight: 1.00 Name: BACU012279/1-210 Len: 401 Check: 3425 Weight: 1.00 // 1 50 ENSP00000319412/1-343 MGGPRGAGWV AAGLLLGAGA CYCIYRLTRG RRRGDRELGI RSSKSAGALE ENSBTAP00000018822/1-307 MGGARDVGWV AAGLVLAAGA CYCFYKLTRG RRRGGRQLRL RPSRSA---- ENSTTRP00000010861/1-329 MGGARDVGWV AAGLVLAAGA CYCFYRLTRG RRRGVPGLRL RPSRSAGSLE bmy_17057T0/1-269 ---------- ---------- ---------- ---------- ---------- BACU012279/1-210 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000319412/1-343 EGTSEGQLCG RSARPQTGGT WESQWSKTSQ PEDLTDGSYD DVLNAEQLQK ENSBTAP00000018822/1-307 ---------- ---------- ---------- -EDLTSGSYD DTLNAEQVQK ENSTTRP00000010861/1-329 EGTPEGQFGG TLKSPWS--- ---------- -KDLTNGSYD DILNAEQLQK bmy_17057T0/1-269 ---------- ---------- ---------- ---------- ---------- BACU012279/1-210 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000319412/1-343 LLYLLESTED PVIIERALIT LGNNAAFSVN QAIIRELGGI PIVANKINHS ENSBTAP00000018822/1-307 LLYLLESTED PVIIERALVT LGNNAAFSAN QIVIRELGGI PIVGSKINNP ENSTTRP00000010861/1-329 LLYLLESTED PVIIERALVT LGNNAAFSVN QVTIRELGGI PIIGSKINNP bmy_17057T0/1-269 ---------- ---------- ---------- --MIRELGGI PIVGSKINNP BACU012279/1-210 ---------- ---------- ---------- --MIRELGGI PIVGSKINNP 151 200 ENSP00000319412/1-343 NQSIKEKALN ALNNLSVNVE NQIKIKIYIS QVCEDVFSGP LNSAVQLAGL ENSBTAP00000018822/1-307 NQSIKEKALN ALNNLSVNVE NQIKIKVYVS QVCEDVIAGP LNSAVQLAGL ENSTTRP00000010861/1-329 NQSIKEKALN ALNNLSVNVE NQIKIKVYVS QVCEDVFSGP LNSAVQLAGL bmy_17057T0/1-269 NQSIKEKALN ALNNLSVNVE NQIKIKVYVS QVCEDVLSGP LBSAVQLAGL BACU012279/1-210 NQSIKEKALN ALNNLSVNVE NQIKIKVYVS QVCEDVLSGP LNSAVQLAGL 201 250 ENSP00000319412/1-343 TLLTNMTVTN DHQHMLHSYI TDLFQVLLTG NGNTKVQVLK LLLNLSENPA ENSBTAP00000018822/1-307 RLLTNMTVTN DHQDMLSSYI TDLFHVLVTG NGSTKVQVLK LLLNLSENPA ENSTTRP00000010861/1-329 RLLTNMTVTN DHQHMLSCYI TDLFHLLLTG NGGTKVQVLK LLLNLSENPA bmy_17057T0/1-269 RLLTNMTVTN DHQHMLSSYS TDLFHLLLTG NGSTKVQVLK LLLNLSENPA BACU012279/1-210 RLLTNMTVTN DHQHMLSSYI TDLFHLLLTG NGSTKVQVLK LLLNLSENPA 251 300 ENSP00000319412/1-343 MTEGLLRAQV DSSFLSLYDS HVAKEILLRV LTLFQNIKNC LKIEGHLAVQ ENSBTAP00000018822/1-307 MTDRLLDAQV DSSFLSLLDG HVPKEILLRA LTLLQNITNC LNEEHRLAAQ ENSTTRP00000010861/1-329 MTDGLLGAKV DSSFLSLYDG HVAKEILLRV LTLFQNITTC LEKEGRLAIQ bmy_17057T0/1-269 MTDGLLGAKV DSSFLSLYDG HVAKEILLRV LTLFQNITTC LEKEGHLAIQ BACU012279/1-210 MTDGLLGAKV DSSFLSLYDG HVAKEILLRV LTLFQNITTC LEKEGHLAIQ 301 350 ENSP00000319412/1-343 PTFTEGSLFF LLHGEECAQK IRALVDHHDA EVKEKVVTII P--------- ENSBTAP00000018822/1-307 PTFPEGSLFS LLYGKECAQK MKALVHHHDA DVKEKVTMI- P--------- ENSTTRP00000010861/1-329 PTFTEGSLFY LLYGEECAQK MRALVYHHDA DVKEKVTMIP K--------- bmy_17057T0/1-269 PTFTEGSLFY LLYGEECAQK MRALVYHHDA DVKEKLLQLF PLHGLTVTFL BACU012279/1-210 PTFTEGSLFY LLYGEECAQK MRALVFHHDA DVKEKVTMI- P--------- 351 400 ENSP00000319412/1-343 ---------- ---------- ---------- ---------- ---------K ENSBTAP00000018822/1-307 ---------- ---------- ---------- ---------- ---------K ENSTTRP00000010861/1-329 ---------- ---------- ---------- ---------- ---------N bmy_17057T0/1-269 CVSYPSTVGS DLQLFIWDSS TTAVIMYIMK AKDHLSSDAN ITIFVLSRSD BACU012279/1-210 ---------- ---------- ---------- ---------- ---------K 401 450 ENSP00000319412/1-343 I ENSBTAP00000018822/1-307 F ENSTTRP00000010861/1-329 W bmy_17057T0/1-269 F BACU012279/1-210 F