KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:48 2014 Check: 00 .. Name: ENSP00000263331/1-1135 Len: 1149 Check: 4755 Weight: 1.00 Name: ENSBTAP00000018830/1-1135 Len: 1149 Check: 3563 Weight: 1.00 Name: ENSTTRP00000010426/1-1134 Len: 1149 Check: 1536 Weight: 1.00 Name: bmy_09024T0/1-996 Len: 1149 Check: 1457 Weight: 1.00 Name: BACU017751/1-1149 Len: 1149 Check: 7268 Weight: 1.00 // 1 50 ENSP00000263331/1-1135 MDPGSRWRNL PSGPSLKHLT DPSYGIPREQ QKAALQELTR AHVESFNYAV ENSBTAP00000018830/1-1135 MDPGGRWRNL PSGPSLKHLT DPSYGIPREQ QKPALQELTR AHVESFNYAV ENSTTRP00000010426/1-1134 MDPDGRWRHL PSGPSLKHLT DPSYGIPREQ QQPALQELTR AHVESFNYAV bmy_09024T0/1-996 MDPGGRWRQL PSGPSLKHLT DPSYGIPREQ QKPALQELTR AHVESFNYAV BACU017751/1-1149 MDPGGRWRHL PSGPSLKHLT DPSYGIPREQ QKPALQELTR AHVESFNYAV 51 100 ENSP00000263331/1-1135 HEGLGLAVQA IPPFEFAFKD ERISFTILDA VISPPTVPKG TICKEANVYP ENSBTAP00000018830/1-1135 REGLSHAVQA VPPFEFAFKD ERICLTIVDA VISPPAVPKG SICKELNVYP ENSTTRP00000010426/1-1134 REGLSHAVQA IPPFEFAFKD ERISLTIVDA VISPPTVPKG SICKELNVYP bmy_09024T0/1-996 REGLSHAVQA IPPFEFAFKD ERISLTIVDA VISPPTVPKG SICKELNVYP BACU017751/1-1149 REGLSHAVQA IPPFEFAFKD ERISLTIVDA VISPPTVPKG SICKELNVYP 101 150 ENSP00000263331/1-1135 AECRGRRSTY RGKLTADINW AVNGISKGII KQFLGYVPIM VKSKLCNLRN ENSBTAP00000018830/1-1135 AECRGRRSTY RGKLTADISW SVNGISKGVI KQFLGYVPIM VKSKLCNLYN ENSTTRP00000010426/1-1134 AECRGRRSTY RGKLTADISW AVNGISKGII KQFLGYVPIM VKSKLCNLYN bmy_09024T0/1-996 AECRGRRSTY RGRLT----- ---------- ---------- ---------- BACU017751/1-1149 AECRGRRSTY RGKLTADISW AVNGISKGII KQFLGYVPIM VKSKLCNLYN 151 200 ENSP00000263331/1-1135 LPPQALIEHH EEAEEMGGYF IINGIEKVIR MLIMPRRNFP IAMI------ ENSBTAP00000018830/1-1135 LPPKALIEHH EEAEEMGGYF IINGIEKVIR MLIMPRRNFP IAMV------ ENSTTRP00000010426/1-1134 LPPKALIQHH EEAEEMGGYF IINGIEKVIR MLIMPRRNFP IAMV------ bmy_09024T0/1-996 ---------- ---------- ---------- ---------- ---------- BACU017751/1-1149 LPPKALIQHH EEAEEMGGYF IINGIEKVIR MLIMPRRNFP IAMKSLSYFI 201 250 ENSP00000263331/1-1135 --------RP KWKTRGPGYT QYGVSMHCVR EEHSAVNMNL HYLENGTVML ENSBTAP00000018830/1-1135 --------RP KWKSRGPGYT QYGVSMHCVR EEHSAVNMNL HYLENGTVML ENSTTRP00000010426/1-1134 --------RP KWKSRGPGYT QYGVSMHCVR EEHSAVNMNL HYLENGTVML bmy_09024T0/1-996 ---------- ---------- ---------- ---------- ---------- BACU017751/1-1149 GLAKRFVRRP KWKSRGPGYT QYGVSVHCVR EEHSAVNMNL HYLENGTVML 251 300 ENSP00000263331/1-1135 NFIYRKELFF LPLGFALKAL VSFSDYQIFQ ELIKGKEDDS FLRNSVSQML ENSBTAP00000018830/1-1135 NFIYRKELFF LPLGFALKAL VSFSDYQIFQ ELIKGKEDDS FFRNSVSQML ENSTTRP00000010426/1-1134 NFIYRKELFF FPLGFALKAL VSFSDYQIFQ ELIKGKEDDS FFRNSVSQML bmy_09024T0/1-996 ---------- --------AL VSFSDYQIFQ ELIKGKEDDS FFRNSVSQML BACU017751/1-1149 NFIYRKELFF FPLGFALKAL VSFSDYQIFQ ELIKGKEDDS FFRNSVSQML 301 350 ENSP00000263331/1-1135 RIVMEEGCST QKQVLNYLGE CFRVKLNVPD WYPNEQAAEF LFNQCICIHL ENSBTAP00000018830/1-1135 RIVMEEGCST QKQVLNYLGE RFRVKLSLPD WYPNEQAAEF LFNQCICIHL ENSTTRP00000010426/1-1134 RIVMEEGCST QKQVLSYLGE RFRVKLSLPD WYPNEHAAEF LFSQCICIHL bmy_09024T0/1-996 RIVMEEGCST QKQVLSYLGE RFRVKLSLPD WYPNEHAAEF LFSQCICIHL BACU017751/1-1149 RIVMEEGCST QKQVLSYLGE RFRVKLSLPD WYPNEHAAEF LFSQCICIHL 351 400 ENSP00000263331/1-1135 KSNTEKFYML CLMTRKLFAL AKGECMEDNP DSLVNQEVLT PGQLFLMFLK ENSBTAP00000018830/1-1135 KSNTEKFYML CLMTRKLFAL AKGECMEENP DSLMNQEVLT PGQLFLMFLK ENSTTRP00000010426/1-1134 KSNTEKFYVL CLMTRKLFAL AKGECMEENP DSLVNQEVLT PGQLFLMFLK bmy_09024T0/1-996 KSNTEKFYVL CLMTRKLFAL AKGECMEENP DSLVNQEVLT PGQLFLMFLK BACU017751/1-1149 KSNTEKFYVL CLMTRKLFAL AKGECMEENP DSLVNQEVLT PGQLFLMFLK 401 450 ENSP00000263331/1-1135 EKLEGWLVSI KIAFDKKAQK TSVSMNTDNL MRIFTMGIDL TKPFEYLFAT ENSBTAP00000018830/1-1135 EKLEAWLVSI KIAIDKKSQK TNVSLNSENL MKIFSLGIDL TKPFEYLLAT ENSTTRP00000010426/1-1134 EKLEAWLASI KIAIDKKAQK TNVSLNTENL MKIFTLGTDL TKPFEYLLAT bmy_09024T0/1-996 EKLEAWLVSI KIAIDKKAQK TNVXLNTENL MKIFSLGTDL TKPFEYLLAT BACU017751/1-1149 EKLEAWLVSI KIAIDKKAQK TNVSLNTENL LKIFNLGTDL TKPFEYLLAT 451 500 ENSP00000263331/1-1135 GNLRSKTGLG LLQDSGLCVV ADKLNFIRYL SHFRCVHRGA DFAKMRTTTV ENSBTAP00000018830/1-1135 GNLRSKTGLG FLQDSGLCVV ADKLNFIRYL SHFRCVHRGA DFAKMRTTTV ENSTTRP00000010426/1-1134 GNLRSKT-LG FLQDSGLCVV ADKLNFIRYL SHFRCVHRGA DFAKMRTTTV bmy_09024T0/1-996 GNLRSKTGLG FLQDSGLCVV ADKLNFIRYL SHFRCVHRGA DFAKMRTTTV BACU017751/1-1149 GNLRSKTGLG FLQDSGLCVV ADKLNFIRYL SHFRCVHRGA DFAKMRTTTV 501 550 ENSP00000263331/1-1135 RRLLPESWGF LCPVHTPDGE PCGLMNHLTA VCEVVTQFVY TASIPALLCN ENSBTAP00000018830/1-1135 RRLLPESWGF LCPVHTPDGE PCGLMNHLTA ICEVVTQSVY TASIPALLCN ENSTTRP00000010426/1-1134 RRLLPESWGF LCPVHTPDGE PCGLMNHLTT ICEVVTQFVY TASVPALLCN bmy_09024T0/1-996 RRLLPESWGF LCPVHTPDGE PCGLMNHLTA ICEVVTQFVY TASIPALLCN BACU017751/1-1149 RRLLPESWGF LCPVHTPDGE PCGLMNHLTA ICEVVTQFVY TASIPALLCN 551 600 ENSP00000263331/1-1135 LGVTPIDGAP HRSYSECYPV LLDGVMVGWV DKDLAPGIAD SLRHFKVLRE ENSBTAP00000018830/1-1135 LGVTPVDGTP HRPYSECYPV LLDGVMIGWA DKEIAPGIAD SLRHFKVLRE ENSTTRP00000010426/1-1134 LGVTPVDGAP HRPYSECYPV LLDGVMVGWV DKELAPGIAD SLRHFKVLRE bmy_09024T0/1-996 LGVTPVDGAP QRPYSECYPV LLDGVMVGWV DKELVPGIAD SLRHFKVLRE BACU017751/1-1149 LGVTPVDGAP QRPYSECYPV LLDGVMVGWV DKELVPGIAD SLRHFKVLRE 601 650 ENSP00000263331/1-1135 KRIPPWMEVV LIPMTGKPSL YPGLFLFTTP CRLVRPVQNL ALGKEELIGT ENSBTAP00000018830/1-1135 KRIPPWMEVA LIPMTGKPSL YPGLYLFTTP CRLVRPVQNL ELGKEELIGT ENSTTRP00000010426/1-1134 KRIPPWMEVV LVPMTGKPSL YPGLYLFTTP CRLVRPVQNL ELGKEELIGT bmy_09024T0/1-996 KRIPPWMEVV LIPMTGKPSL YPGLYLFTTP CRLVRPVQNL ELGKEELIGT BACU017751/1-1149 KRIPPWMEVV LIPMTGKPSL YPGLYLFTTP CRLVRPVQNL ELGKEELIGT 651 700 ENSP00000263331/1-1135 MEQIFMNVAI FEDEVFAGVT THQELFPHSL LSVIANFIPF SDHNQSPRNM ENSBTAP00000018830/1-1135 MEQIFMNVAI FEDEVLAGVT THQELFPHSL LSVIANFIPF SDHNQSPRNM ENSTTRP00000010426/1-1134 MEQIFMNVAV FEDEVLAGVT THQELFPHSL LSVIANFIPF SDHNQSPRNM bmy_09024T0/1-996 MEQIFMNVAV FEEEVLAGVT THQELFPHSL LSVIASFIPF SDHNQSPRNM BACU017751/1-1149 MEQIFMNVAV FEDEVLAGVT THQELFPHSL LSVIASFIPF SDHNQSPRNM 701 750 ENSP00000263331/1-1135 YQCQMGKQTM GFPLLTYQDR SDNKLYRLQT PQSPLVRPSM YDYYDMDNYP ENSBTAP00000018830/1-1135 YQCQMGKQTM GFPLLTFQDR SDNKLYRLQT PQSPLVRPYM YDYYDMDNYP ENSTTRP00000010426/1-1134 YQCQMGKQTM GFPLLTFQDR SDNKLYRLQT PQSPLVRPYM YDYYDMDNYP bmy_09024T0/1-996 YQCQMGKQTM GFPLLTFQDR SDNKLYRLQT PQSPLVRPYM YDYYDMDNYP BACU017751/1-1149 YQCQMGKQTM GFPLLTFQAR SDNKLYRLQT PQSPLVRPYM YDYYDMDNYP 751 800 ENSP00000263331/1-1135 IGTNAIVAVI SYTGYDMEDA MIVNKASWER GFAHGSVYKS EFIDLSEKIK ENSBTAP00000018830/1-1135 IGTNAIVAVI SYTGYDMEDA MIVNKASWER GFAHGSVYKS EFIDLSERIK ENSTTRP00000010426/1-1134 IGTNAIVAVI SYTGYDMEDA MIVNKASWER GFAHGSVYKS ECIDLSEKIK bmy_09024T0/1-996 IGTNAIVAVI SYTGYDMEDA MIVNKASWER GFAHGSVYKS ECIDLSEKIK BACU017751/1-1149 IGTNAIVAVI SYTGYDMEDA MIVNKASWER GFAHGSVYKS ECIDLSEKIK 801 850 ENSP00000263331/1-1135 QGDSSLVFGI KPGDPRVLQK LDDDGLPFIG AKLQYGDPYY SYLNLNTGES ENSBTAP00000018830/1-1135 QGDDSLVFGV KPGDPRVLQK LDNDGLPFIG AQLKYGDPYY SYLNLNTGEG ENSTTRP00000010426/1-1134 QGDDSLVFGV KPGDPRILQR LDDDGLPFIG AQLQYGDPYY SYVNLNTGES bmy_09024T0/1-996 QGDDSLVFGV KPGDPRILQK LDDDGLPFIG AQLQYGDPYY SYLNLNTGES BACU017751/1-1149 QGDDSLVFGV KPGDPRILQK LDDDGLPFIG AQLQYGDPYY SYLNLNTGES 851 900 ENSP00000263331/1-1135 FVMYYKSKEN CVVDNIKVCS NDTGSGKFKC VCITMRVPRN PTIGDKFASR ENSBTAP00000018830/1-1135 FVMYYKSKEN CIVDNIKVCS NDTGTGKFKC VCITMRVPRN PTIGDKFASR ENSTTRP00000010426/1-1134 FVMYYKSKEN CIVDNIKVCS NDTGNGKFKC VCITMRVPRN PTIGDKFASR bmy_09024T0/1-996 FVMYYKSKEN CIVDNIKVCS NDTGNGKFKC VCITMRVPRN PTIGDKFASR BACU017751/1-1149 FVTYYKSKEN CIVDNIKVCS NDTGNGKFKC VCITMRVPRN PTIGDKFASR 901 950 ENSP00000263331/1-1135 HGQKGILSRL WPAEDMPFTE SGMVPDILFN PHGFPSRMTI GMLIESMAGK ENSBTAP00000018830/1-1135 HGQKGILSRL WPVEDMPFTE SGMVPDILFN PHGFPSRMTI GMLIESMAGK ENSTTRP00000010426/1-1134 HGQKGILSRL WPAEDMPFTE SGMVPDILFN PHGFPSRMTI GMLIESMAGK bmy_09024T0/1-996 HGQKGILSXL WPVEDMPFTE SGMVPDILFN PHGFPSRMTI GMLIESMAGK BACU017751/1-1149 HGQKGILSRL WPVEDMPFTE SGMVPDILFN PHGFPSRMTI GMLIESMAGK 951 1000 ENSP00000263331/1-1135 SAALHGLCHD ATPFIFSEEN SALEYFGEML KAAGYNFYGT ERLYSGISGL ENSBTAP00000018830/1-1135 SAALHGLCHD ATPFIFSEEN SALEYFGEML KAAGYNYYGT ERLYSGISGL ENSTTRP00000010426/1-1134 SAALHGLCHD ATPFIFSEEN SALEYFGKML KAAGYNYYGT ERLYSGISGL bmy_09024T0/1-996 SAALHGLCHD ATPFIFSEEN SALEYFGEML KAAGYNYYGT ERLYSGISGL BACU017751/1-1149 SAALHGLCHD ATPFIFSEEN SALEYFGGML KAAGYNYYGT ERLYSGISGL 1001 1050 ENSP00000263331/1-1135 ELEADIFIGV VYYQRLRHMV SDKFQVRTTG ARDRVTNQPI GGRNVQGGIR ENSBTAP00000018830/1-1135 ELEADIFIGV VYYQRLRHMV SDKFQVRTTG ARDKVTNQPI GGRNVQGGIR ENSTTRP00000010426/1-1134 ELDADIFIGV VYYQRLRHMV SDKFQVRTTG ARDKVTNQPI GGRNVQGGIR bmy_09024T0/1-996 ELDADIFIGV VYYQRLRHMV SDKFQVRTTG ARDKVTNQPI GGRNVQGGIR BACU017751/1-1149 ELDADIFIGV VYYQRLRHMV SDKFQVRTTG ARDKVTNQPI GGRNVQGGIR 1051 1100 ENSP00000263331/1-1135 FGEMERDALL AHGTSFLLHD RLFNCSDRSV AHVCVKCGSL LSPLLEKPPP ENSBTAP00000018830/1-1135 FGEMERDALL AHGTSFLLHD RLFNCSDRSV AHVCVKCGSL LSPLLEKPPP ENSTTRP00000010426/1-1134 FGEMERDALL AHGTSFLLHD RLFNCSDRSV AHVCVKCGSL LSPLLEKPPP bmy_09024T0/1-996 FGEMERDALL AHGTSFLLHD RLFNCSDRSV AHVCVKCGSL LSPLLEKPPP BACU017751/1-1149 FGEMERDALL AHGTSFLLHD RLFNCSDRSV AHVCVKCGSL LSPLLEKPPP 1101 1150 ENSP00000263331/1-1135 SWSAMRNRKY NCTLCSRSDT IDTVSVPYVF RYFVAELAAM NIKVKLDVV ENSBTAP00000018830/1-1135 SWSALRNRKY ICALCNRSDT IDTISLPYVF RYFVAELAAM NIKVKLDIV ENSTTRP00000010426/1-1134 SWSTMRNRKY NCTLCNRSDT IDTVSVPYVF RYFVAELAAM NIKVKLDIV bmy_09024T0/1-996 SWSTMRNRKY NCTLCNRSDT IDTVSVPYVF RYFVAELAAM NIKVKLDIV BACU017751/1-1149 SWSAMRNRKY NCTLCNRSDT IDTVSVPYVF RYFVAELAAM NIKVKLDIV