KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:50 2014 Check: 00 .. Name: bmy_03659T0/1-193 Len: 335 Check: 4022 Weight: 1.00 Name: BACU018820/1-302 Len: 335 Check: 2242 Weight: 1.00 Name: ENSP00000354571/1-327 Len: 335 Check: 2208 Weight: 1.00 Name: ENSTTRP00000003702/1-306 Len: 335 Check: 6903 Weight: 1.00 Name: ENSBTAP00000018851/1-295 Len: 335 Check: 399 Weight: 1.00 // 1 50 bmy_03659T0/1-193 ---------- ---------- ---------- ----MEHTRC A--------- BACU018820/1-302 ---------- ---------- ---------- --FRVEHARM HAKHRGHEAM ENSP00000354571/1-327 MAAVVEVEVG GGAAGERELD EVDMSDLSPE EQWRVEHARM HAKHRGHEAM ENSTTRP00000003702/1-306 ---------- ---------- -VDMSDLSPE EQWRVEHARM HAKHRGHEAM ENSBTAP00000018851/1-295 ---------- ---------- ---------- --MRIEHARM HAKHRGHEAM 51 100 bmy_03659T0/1-193 -LDLQIELQR ELARAEVLVF --------VF QMVTLFQMWV VPLYFTVKLH BACU018820/1-302 HAEMVLILIA TLVVAQLLLV QWKQRHPRSY NMVTLFQMWV VPLYFTVKLH ENSP00000354571/1-327 HAEMVLILIA TLVVAQLLLV QWKQRHPRSY NMVTLFQMWV VPLYFTVKLH ENSTTRP00000003702/1-306 HAEMVLILIA TLVVAQLLLV QWKQRHPRSY NMVTLFQMWV VPLYFTVKLH ENSBTAP00000018851/1-295 HAEMVLILIA TLVVAQLLLV QWKQRHPRSY NMVTLFQMWV VPLYFTVKLH 101 150 bmy_03659T0/1-193 WWRFLVIWIL FSAVTAFVTF RATRKPLVQT TPRLVY--KW FL-----LIY BACU018820/1-302 WWRFLVIWIL FSAVTAFVTF RATRKPLVQT TPSKIYLQGW FLSGSXXLIY ENSP00000354571/1-327 WWRFLVIWIL FSAVTAFVTF RATRKPLVQT TPRLVY--KW FL-----LIY ENSTTRP00000003702/1-306 WWRFLVIWIL FSAVTAFVTF RATRKPLVQT TPRLVY--KW FL-----LIY ENSBTAP00000018851/1-295 WWRFLVIWIL FSAVTAFVTF RATRKPLVQT TPRLVY--KW FL-----LIY 151 200 bmy_03659T0/1-193 KISYATGIIG YMAVMFTLFG LNLLFKIKPE DAMDFGISLL FYGLYYGVLE BACU018820/1-302 KISYATGIIG YMAVMFTLFG LNLLFKIKPE DAMDFGISLL FYGLYYGVLE ENSP00000354571/1-327 KISYATGIVG YMAVMFTLFG LNLLFKIKPE DAMDFGISLL FYGLYYGVLE ENSTTRP00000003702/1-306 KISYATGIIG YMAVMFTLFG LNLLFKIKPE DAMDFGISLL FYGLYYGVLE ENSBTAP00000018851/1-295 KISYATGIVG YMAVMFTLFG LNLLFKIKPE DAMDFGISLL FYGLYYGVLE 201 250 bmy_03659T0/1-193 RDFAEMCADY MASTIG---- ---------- ---------- ---VSSLGLF BACU018820/1-302 RDFAEMCADY MASTIGFYSE SGMPTKHLSD SVCAVCGQQI FVDVSEEGII ENSP00000354571/1-327 RDFAEMCADY MASTIGFYSE SGMPTKHLSD SVCAVCGQQI FVDVSEEGII ENSTTRP00000003702/1-306 RDFAEMCADY MASTIGFYSE SGMPTKHLSD SVCAVCGQQI FVDVSEEGII ENSBTAP00000018851/1-295 RDFAEMCADY MASTIGFYSE SGMPTKHLSD SVCAVCGQQI FVDVSEEGII 251 300 bmy_03659T0/1-193 NTA---SCH- ---------- ---------- -------LQR V--------- BACU018820/1-302 ENTYRLSCNH VFHEFCIRGW CIVGKKQTCP YCKEKVDLKR MFSNPWERPH ENSP00000354571/1-327 ENTYRLSCNH VFHEFCIRGW CIVGKKQTCP YCKEKVDLKR MFSNPWERPH ENSTTRP00000003702/1-306 ENTYRLSCNH VFHEFCIRGW CIVGKKQTCP YCKEKVDLKR MFSNPWERPH ENSBTAP00000018851/1-295 ENTYRLSCNH VFHEFCIRGW CIVGKKQTCP YCKEKVDLKR MFSNPWERPH 301 350 bmy_03659T0/1-193 ---------- ------QDSI TCLMEDISHT KSFRM BACU018820/1-302 VMYGQLLDWL RYLVAWQPVI IGLVQGINYI LGLE- ENSP00000354571/1-327 VMYGQLLDWL RYLVAWQPVI IGVVQGINYI LGLE- ENSTTRP00000003702/1-306 VMYGQLLDWL RYLVAWQPVI IGLVQGINYI LGLE- ENSBTAP00000018851/1-295 VMYGQLLDWL RYLVAWQPVI IGLVQGINYI LGLE-