KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:53 2014 Check: 00 .. Name: ENSBTAP00000018862/1-406 Len: 579 Check: 4613 Weight: 1.00 Name: ENSP00000290231/1-579 Len: 579 Check: 2206 Weight: 1.00 Name: BACU018373/1-569 Len: 579 Check: 471 Weight: 1.00 Name: bmy_06249T0/1-563 Len: 579 Check: 792 Weight: 1.00 Name: ENSTTRP00000000456/1-579 Len: 579 Check: 9677 Weight: 1.00 // 1 50 ENSBTAP00000018862/1-406 MNTAPSRPSP TRRDPYGFGD SRDTRRDRSP IRGSPRREPR DGRNGRDARD ENSP00000290231/1-579 MNTAPSRPSP TRRDPYGFGD SRDSRRDRSP IRGSPRREPR DGRNGRDARD BACU018373/1-569 ---------- SHRDPYGFGD SRDTRRDRSP IRGSPRREPR DGRNGRDARD bmy_06249T0/1-563 MNTAPSRPSP TRRDPYGFGD SRDTRRDRSP IRGSPRREPR DGRNGRDARD ENSTTRP00000000456/1-579 MNTAPSRPSP TRRDPYGFGD SRDTRRDRSP IRGSPRREPR DGRNGRDARD 51 100 ENSBTAP00000018862/1-406 GRDMRDPRDL RDHRDSRDIR DHRDSRSMRD ARDMRDLRDF RDLRETRNFR ENSP00000290231/1-579 SRDIRDPRDL RDHRHSRDLR DHRDSRSVRD VRDVRDLRDF RDLRDSRDFR BACU018373/1-569 SRDMRDPRDL RDHRESRDIR DHRDSRSMRD ARDMRDPRDF RDLRDSRDFR bmy_06249T0/1-563 SRDMRDPRDL RDHRESRDIR DHRDSRSMRD ARDMRDPRDF RDLRDSRDFR ENSTTRP00000000456/1-579 SRDMRDPRDL RDHRESRDIR DHRDSRSMRD ARDMRDPRDF RDLRDSRDFR 101 150 ENSBTAP00000018862/1-406 DHRDPMYDRY REMRDSRDPI LRREGSYDRY LRMDDYCRRK DDAYFDRYRD ENSP00000290231/1-579 DQRDPMYDRY RDMRDSRDPM YRREGSYDRY LRMDDYCRRK DDSYFDRYRD BACU018373/1-569 DHRDPMYDRY RDMRDSRDPM YRREGSYDRY LRMDDYCRRK DDSYFDRYRD bmy_06249T0/1-563 DHRDPM---- ---------- --REGSYDRY LRMDDYCRRK DDSYFDRYRD ENSTTRP00000000456/1-579 DHRDPMYDRY RDMRDSRDPM YRREGSYDRY LRMDDYCRRK DDSYFDRYRD 151 200 ENSBTAP00000018862/1-406 SFDGRGPPGP ESQSRVKERL KREERRREEL YRQYFEEIQR RFDAERPVDC ENSP00000290231/1-579 SFDGRGPPGP ESQSRAKERL KREERRREEL YRQYFEEIQR RFDAERPVDC BACU018373/1-569 SFDGRGPPGP ESQSRAKERL KREERRREEL YRQYFEEIQR RFDAERPVDC bmy_06249T0/1-563 SFDGRGPPGP ESQSRAKERL KREERRREEL YRQYFEEIQR RFDAERPVDC ENSTTRP00000000456/1-579 SFDGRGPPGP ESQSRAKERL KREERRREEL YRQYFEEIQR RFDAERPVDC 201 250 ENSBTAP00000018862/1-406 SVIVVNKQTK DYAESVGRKV RDLGMVVDLI FLNTEVSLSQ ALEDVSRGGS ENSP00000290231/1-579 SVIVVNKQTK DYAESVGRKV RDLGMVVDLI FLNTEVSLSQ ALEDVSRGGS BACU018373/1-569 SVIVVNKQTK DYAESVGRKV RDLGMVVDLI FLNTEVSLSQ ALEDVSRGGS bmy_06249T0/1-563 SVIVVNKQTK DYAESVGRKV RDLGMVVDLI FLNTEVSLSQ ALEDVSRGGS ENSTTRP00000000456/1-579 SVIVVNKQTK DYAESVGRKV RDLGMVVDLI FLNTEVSLSQ ALEDVSRGGS 251 300 ENSBTAP00000018862/1-406 PFAIVITQQH QIHRSCTVNI MFGTPQEHRN MPQADAMVLV ARNYERYKNE ENSP00000290231/1-579 PFAIVITQQH QIHRSCTVNI MFGTPQEHRN MPQADAMVLV ARNYERYKNE BACU018373/1-569 PFAIVITQQH QIHRSCTVNI MFGTPQEHRN MPQADAMVLV ARNYERYKNE bmy_06249T0/1-563 PFAIVITQQH QIHRSCTVNI MFGTPQEHRN MPQADAMVLV ARNYERYKNE ENSTTRP00000000456/1-579 PFAIVITQQH QIHRSCTVNI MFGTPQEHRN MPQADAMVLV ARNYERYKNE 301 350 ENSBTAP00000018862/1-406 CREKEREEIA RQAAKMADEA ILQERERGGP EEGMRGGHPP AIQSLLNLLA ENSP00000290231/1-579 CREKEREEIA RQAAKMADEA ILQERERGGP EEGVRGGHPP AIQSLINLLA BACU018373/1-569 CREKEREEIA RQAAKMADEA LLQERERGGP EEGMRGGHPP AIQSLINLLA bmy_06249T0/1-563 CREKEREEIA RQAAKMADEA LLQERERGGP EEGMRGGHPP AIQSLINLLA ENSTTRP00000000456/1-579 CREKEREEIA RQAAKMADEA LLQERERGGP EEGLRGGHPP AIQSLINLLA 351 400 ENSBTAP00000018862/1-406 DNRYLTAEET DKIINYLRER KERLMRSSTD SLPGELR--- ---------- ENSP00000290231/1-579 DNRYLTAEET DKIINYLRER KERLMRSSTD SLPGPISRQP LGATSGASLK BACU018373/1-569 DNRYLTAEET DKIINYLRER KERLMRSSTD SLPGQISRQP LGATSGASLK bmy_06249T0/1-563 DNRYLTAEET DKIINYLRER KERLMRSSTD SLPGPISRQP LGATSGASLK ENSTTRP00000000456/1-579 DNRYLTAEET DKIINYLRER KERLMRSSAD SLPGPISRQP LGATSGASLK 401 450 ENSBTAP00000018862/1-406 ---------- ---------- ---------- ---------- ---------- ENSP00000290231/1-579 TQPSSQPLQS GQVLPSATPT PSAPPTSQQE LQAKILSLFN SGTVTANSSS BACU018373/1-569 TQSSSQPLQS GQVLPSATPT PAAPPTSQQE LQAKILSLFN SGTVAANSSS bmy_06249T0/1-563 TQPSSQPLQS GQVLPSATPT PAAPPTSQQE LQAKILSLFN SGTVAANSSS ENSTTRP00000000456/1-579 TQPSSQTLQS GQVLPSATPT PAAPPTSQQE LQAKILSLFN SGTVVANSSS 451 500 ENSBTAP00000018862/1-406 ---------- ---------- ---------- ---------- ---------- ENSP00000290231/1-579 ASPSVAAGNT PNQNFSTAAN SQPQQRSQAS GNQPPSILGQ GGSAQNMGPR BACU018373/1-569 ASPSVAAGNT QNQNFSIAAN NQPQQRSQAS GNQPPNILGQ AGSARNMGPR bmy_06249T0/1-563 ASPSVAAGNT QNQNFSIAAN SQPQQRSQAS GNQPPNILGQ AGSARNMGPR ENSTTRP00000000456/1-579 ASPSVAAGNT QNQNFSIAAN SQPQQRSQAS GNQPPNILGQ AGSARNMGPR 501 550 ENSBTAP00000018862/1-406 ---------G RAEARF---- ------PVNH S--------- ---------- ENSP00000290231/1-579 PGAPSQGLFG QPSSRLAPAS NMTSQRPVSS TGINFDNPSV QKALDTLIQS BACU018373/1-569 PGAPSQGLFG QPSTRLVPAS NLASQRPVSS TGINFDNPSV QKALDTLIQS bmy_06249T0/1-563 PGAPSQGLFG QPSTRLAPAS NLASQRPVSS TGINFDNPSV QKALDTLIQS ENSTTRP00000000456/1-579 PGAPSQGLFG QPSTRLAPAS NLASQRPVSS TGINFDNPSV QKALDTLIQS 551 600 ENSBTAP00000018862/1-406 ---------- -----GRPRV PH------- ENSP00000290231/1-579 GPALSHLVSQ TTAQMGQPQA PMGSYQRHY BACU018373/1-569 GPALSHLVSQ TTAQVGRPQA PMGSYQRHY bmy_06249T0/1-563 GPALSHLVSQ TTAQVGRPQA PMGSYQRHY ENSTTRP00000000456/1-579 GPALSHLVSQ TTAQVGRPQA PMGSYQRHY