KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:55 2014 Check: 00 .. Name: ENSTTRP00000005499/1-547 Len: 547 Check: 9041 Weight: 1.00 Name: ENSP00000389843/1-547 Len: 547 Check: 2607 Weight: 1.00 Name: bmy_09839T0/1-530 Len: 547 Check: 8065 Weight: 1.00 Name: BACU007954/1-547 Len: 547 Check: 3380 Weight: 1.00 Name: ENSBTAP00000018876/1-547 Len: 547 Check: 2007 Weight: 1.00 // 1 50 ENSTTRP00000005499/1-547 MDPMELSNVN IEPDDESISG ESIQDSYTGM GNLEKAAMSS QFTNEDAESQ ENSP00000389843/1-547 MDPMELRNVN IEPDDESSSG ESAPDSYIGI GNSEKAAMSS QFANEDTESQ bmy_09839T0/1-530 MDPMELSNVN IEPDDESISG ESIQDSYTGM GNLEKAAMSS QFTNEDAESQ BACU007954/1-547 MDPMELSNVN IEPDDESISG ESIQDSYTGM GNLEKAAMSS QFTNEDAESQ ENSBTAP00000018876/1-547 MDPMELSNVN IEPDDESISG ESIQDSYTGM GNLEKAAMSS QFTNEDAESQ 51 100 ENSTTRP00000005499/1-547 KFLTNGFLGK KKLADYDDEH HPGTTSFGMS SFNLSNAIMG SGILGLSYAM ENSP00000389843/1-547 KFLTNGFLGK KKLADYADEH HPGTTSFGMS SFNLSNAIMG SGILGLSYAM bmy_09839T0/1-530 KFLTNGFLGK KKLADYDDEH HPGXTSFGMS SFNLSNAIMG SGILGLSYAM BACU007954/1-547 KFLTNGFLGK KKLADYDDEH HPGTTSFGMS SFNLSNAIMG SGILGLSYAM ENSBTAP00000018876/1-547 KFLTNGFLGK KKLADYDDEH HPGTTSFGMS SFNLSNAIMG SGILGLSYAM 101 150 ENSTTRP00000005499/1-547 ANTGIILFII MLLAVAILSL YSVHLLLKTA KEGGSLIYEK LGEKAFGWPG ENSP00000389843/1-547 ANTGIILFII MLLAVAILSL YSVHLLLKTA KEGGSLIYEK LGEKAFGWPG bmy_09839T0/1-530 ANTGIILFII MLLAVAILSL YSVHLLLKTA KEGGSLIYEK LGEKAFGWPG BACU007954/1-547 ANTGIILFII MLLAVAILSL YSVHLLLKTA KEGGSLIYEK LGEKAFGWPG ENSBTAP00000018876/1-547 ANTGIILFII MLLAVAVLSL YSVHLLLKTA KEGGSLIYEK LGEKAFGWPG 151 200 ENSTTRP00000005499/1-547 KIGAFISITM QNIGAMSSYL FIIKYELPEV IRAFMGLEEN TGEWYVNGNY ENSP00000389843/1-547 KIGAFVSITM QNIGAMSSYL FIIKYELPEV IRAFMGLEEN TGEWYLNGNY bmy_09839T0/1-530 KIGAFISITM QNIGAMSSYL FIIKYELPEV IRAFMGLEEN TGEWYVNGNY BACU007954/1-547 KIGAFISITM QNIGAMSSYL FIIKYELPEV IRAFMGLEEN TGEWYVNGNY ENSBTAP00000018876/1-547 KIGAFISITM QNIGAMSSYL FIIKYELPEV IRAFMGLEEN TGEWYLNGNY 201 250 ENSTTRP00000005499/1-547 LVIFVSVGII LPLSLLKNLG XXXXXXXXXX XXXXXXXXXV IYKKFQIPCP ENSP00000389843/1-547 LIIFVSVGII LPLSLLKNLG YLGYTSGFSL TCMVFFVSVV IYKKFQIPCP bmy_09839T0/1-530 LVIFVSVGII LPLSLLKNLG YLGYTSGFSL TCMVFFVSVV IYKKFQIPCP BACU007954/1-547 LVIFVSVGII LPLSLLKNLG YLGYTSGFSL TCMVFFVSVV IYKKFQIPCP ENSBTAP00000018876/1-547 LVIFVSVGII LPLSLLKNLG YLGYTSGFSL TCMVFFVSVV IYKKFQIPCP 251 300 ENSTTRP00000005499/1-547 LPVLDHNVGN LTFNNTVPMH VMMLPNNSES SGVNFMMDYT HQNPAELDEK ENSP00000389843/1-547 LPVLDHSVGN LSFNNTLPMH VVMLPNNSES SDVNFMMDYT HRNPAGLDEN bmy_09839T0/1-530 LPVLDHNVGN LTFNNTVPMH VMMSPNNSES SGVNFMMDYT HQNPAGLDDN BACU007954/1-547 LPVLDHNVGN LTFNNTVPMH VMMLPNNSES SGVNFMMDYT HQNPAGLDDN ENSBTAP00000018876/1-547 LPILDHSVGN LTFNNTVPMH VVMLLNNTES SGVNFMMDYT HQNAAGLDEN 301 350 ENSTTRP00000005499/1-547 QAKGSIHGSG VEYEAHSDDK CQPKYFVFNS RTAYAIPILA FAFVCHPEVL ENSP00000389843/1-547 QAKGSLHDSG VEYEAHSDDK CEPKYFVFNS RTAYAIPILV FAFVCHPEVL bmy_09839T0/1-530 QAKGSIHGSG VEYEAHSDDK CQPKYFVFNS RTAYAIPILA FAFVCHPEVL BACU007954/1-547 QAKGSIHGSG VEYEAHSDDK CQPKYFVFNS RTAYAIPILA FAFVCHPEVL ENSBTAP00000018876/1-547 QAKGSLHGSG VEFEAHSDDK CQPKYFVFNS RTAYAIPILA FAFVCHPEVL 351 400 ENSTTRP00000005499/1-547 PIYSELKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXEVEDELLH ENSP00000389843/1-547 PIYSELKDRS RRKMQTVSNI SITGMLVMYL LAALFGYLTF YGEVEDELLH bmy_09839T0/1-530 PIYSELKDRS RRKMQTVSNV SITGMLVMYL LAALFGYLTF YGEVEDELLH BACU007954/1-547 PIYSELKDRS RRKMQTVSNV SITGMLVMYL LAALFGYLTF YGEVEDELLH ENSBTAP00000018876/1-547 PIYSELKDRS RRKMQTVSNV SITGMLVMYL LAALFGYLTF YGEVEDELLH 401 450 ENSTTRP00000005499/1-547 AYSKVYTFDT PLLMVRLAVL VAVTLTVPIV LFPIRTSVIT LLFPKRPFSW ENSP00000389843/1-547 AYSKVYTLDI PLLMVRLAVL VAVTLTVPIV LFPIRTSVIT LLFPKRPFSW bmy_09839T0/1-530 AYSKVYTFDT PLLMVRLAVL VAVTLTVPIV LFPV--SFVL LRKCTKPFSW BACU007954/1-547 AYSKVYTFDT PLLMVRLAVL VAVTLTVPIV LFPIRTSVTT LLFPKRPFSW ENSBTAP00000018876/1-547 AYSKVYTFDT PLLMVRLAVL MAVTLTVPIV LFPIRTSVTT LLFPKRPFSW 451 500 ENSTTRP00000005499/1-547 IRHFLIAAIL IALNNVLVIL VPTIKYIFGF IGASSATMLI FILPAVFYLK ENSP00000389843/1-547 IRHFLIAAVL IALNNVLVIL VPTIKYIFGF IGASSATMLI FILPAVFYLK bmy_09839T0/1-530 IRHFLIAAIL IALDNVLVIL VPTIKYIFGF IGASSATMLI FILPAVFYLK BACU007954/1-547 IRHFLIAAIL IALDNVLVIL VPTIKYIFGF IGASSATMLI FILPAVFYLK ENSBTAP00000018876/1-547 IRHFLIAAII IALNNVLVIL VPTIKYIFGF IGASSATMLI FILPAVFYLK 501 550 ENSTTRP00000005499/1-547 LVKKEPLRSP QKVGALIFLV VGIIFMIGSM ALIIIDWIYN PPNSKHH ENSP00000389843/1-547 LVKKETFRSP QKVGALIFLV VGIFFMIGSM ALIIIDWIYD PPNSKHH bmy_09839T0/1-530 LVKKEPLRSP QKVG------ VSKVCNLSHY NL-LFDYIE- ------- BACU007954/1-547 LVKKEPLRSP QKVGALIFLV VGIIFMIGSM ALIIIDWIYN PPNSKHH ENSBTAP00000018876/1-547 LVKKEPFRSP QKVGALIFLV VGIIFMMGSM ALIIIDWIYD PPNSKHH