KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:56 2014 Check: 00 .. Name: ENSTTRP00000016434/1-399 Len: 425 Check: 9217 Weight: 1.00 Name: BACU002415/1-290 Len: 425 Check: 9456 Weight: 1.00 Name: ENSP00000265563/1-404 Len: 425 Check: 9820 Weight: 1.00 Name: bmy_05986T0/1-419 Len: 425 Check: 6659 Weight: 1.00 Name: ENSBTAP00000018886/1-401 Len: 425 Check: 8176 Weight: 1.00 // 1 50 ENSTTRP00000016434/1-399 MSHIQIPPGL TELLQGYTVE VLRQQPPDLV DFAVDYFTRL REARSRASTP BACU002415/1-290 ---------- ---------- ---------- ---------- ---------- ENSP00000265563/1-404 MSHIQIPPGL TELLQGYTVE VLRQQPPDLV EFAVEYFTRL REARAPASVL bmy_05986T0/1-419 MSHIQIPPGL TELLQGYTVE VLRQRPPDLV DFAVDYFTRL REARSRASTP ENSBTAP00000018886/1-401 MSHIQIPPGL TELLQGYTVE VLRQRPPDLV DFAVDYFTRL REARSRASTP 51 100 ENSTTRP00000016434/1-399 PAAS----FR LPGLEPGPGL VADAIADSES -DEEDLD--- ---------- BACU002415/1-290 ---------- ---------- ---------- ---------- ---------- ENSP00000265563/1-404 PAATPRQSLG HPPPEPGPDR VADAKGDSES EEDEDLE--- ---------- bmy_05986T0/1-419 PAAPP---SG SQGLEPGPGL VADAITDSES EDEEDLDDLP DCGKVEGPQV ENSBTAP00000018886/1-401 PAAPP---SG SQDFDPGAGL VADAVADSES EDEEDLD--- ---------- 101 150 ENSTTRP00000016434/1-399 --------XX XXXXXXXXXX XCAETYNPDE EEEDTDPRVI HPKTDQQRCR BACU002415/1-290 ---------- ---------- ---------- -----DWQVI HPKTDQQRCR ENSP00000265563/1-404 --------VP VPSRFNRRVS VCAETYNPDE EEEDTDPRVI HPKTDEQRCR bmy_05986T0/1-419 GNQWSKKIVP LPNRFDRRVS VCAETYNPDE EEEDTDPRVI HPKTDQQRCR ENSBTAP00000018886/1-401 --------VP IPGRFDRRVS VCAETYNPDE EEEDTDPRVI HPKTDQQRCR 151 200 ENSTTRP00000016434/1-399 LQEACKDILL FKNLDQXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU002415/1-290 LQEACKDILL FKNLDQVTLI FKIFLAFGFS LFCFHYTYWY SYLLVMAGNI ENSP00000265563/1-404 LQEACKDILL FKNLDQEQLS QVLDAMFERI VKADEHVIDQ GDDGDNFYVI bmy_05986T0/1-419 LQEACKDILL FKNLDQEQLS QVLDAMFERT VKVDEHVIDQ GDDGDNFYVI ENSBTAP00000018886/1-401 LQEACKDILL FKNLDPEQLS QVLDAMFERT VKVDEHVIDQ GDDGDNFYVI 201 250 ENSTTRP00000016434/1-399 XXGTYDILVT KDNQTRCVGQ YDNHGSFGEL ALMYNTPRAA TIVATSEGSL BACU002415/1-290 GKGTYDILVT KDNQTRSVGQ YDNHGSFGEL ALMYNTPRAA TIVATSEGSL ENSP00000265563/1-404 ERGTYDILVT KDNQTRSVGQ YDNRGSFGEL ALMYNTPRAA TIVATSEGSL bmy_05986T0/1-419 ERSN---TVT KDNQTRSVGQ YDNHGSFGEL ALMYNTPRAA TIIATSEGSL ENSBTAP00000018886/1-401 ERGTYDILVT KDNQTRSVGQ YDNHGSFGEL ALMYNTPRAA TIVATSEGSL 251 300 ENSTTRP00000016434/1-399 WGLDRVTFRR IIVKNNAKKR KMFESFIESV QLLKSLEVSE RMKIVDVIGE BACU002415/1-290 WGLDRVTFRR IIVKNNAKKR KMFESFIESV LLLKSLEVSE RMKIVDVIGE ENSP00000265563/1-404 WGLDRVTFRR IIVKNNAKKR KMFESFIESV PLLKSLEVSE RMKIVDVIGE bmy_05986T0/1-419 WGLDRVTFRR IIVKNNAKKR KMFESFIESV LLLKSLEVSE RMKIVDVIGE ENSBTAP00000018886/1-401 WGLDRVTFRR IIVKNNAKKR KMFESFIESV PLLKSLEVSE RMKIVDVIGE 301 350 ENSTTRP00000016434/1-399 KVYKDGERII TQGEKADSFY IIESGEVSIL IKSKTKANKD GGNQEVEIAR BACU002415/1-290 KVYKDGERII TQGEKADSFY IIESGEVSIL IKSKTKANKD GGNQEVEIAR ENSP00000265563/1-404 KIYKDGERII TQGEKADSFY IIESGEVSIL IRSRTKSNKD GGNQEVEIAR bmy_05986T0/1-419 KVYKDGERII TQGEKADSFY IIESGEVSIL IKSKTKANKD GGNQEVEIAR ENSBTAP00000018886/1-401 KVYKDGERII TQGEKADSFY IIESGEVSIL IKSKTKVNKD GENQEVEIAR 351 400 ENSTTRP00000016434/1-399 CHKGQYFGEL ALVTNKPRAA SAYAVGDVKC LVMDVQAFER LLGPCMDIMK BACU002415/1-290 CHKGQYFGEL ALVTNKPRAA SAYAVGDVKC LVMDVQAFER LLGPCMDIMK ENSP00000265563/1-404 CHKGQYFGEL ALVTNKPRAA SAYAVGDVKC LVMDVQAFER LLGPCMDIMK bmy_05986T0/1-419 CHKGQYFGEL ALVTNKPRAA SAYAVGDVKC LVMDVQAFER LLGPCMDIMK ENSBTAP00000018886/1-401 CHKGQYFGEL ALVTNKPRAA SAYAVGDVKC LVMDVQAFER LLGPCMDIMK 401 450 ENSTTRP00000016434/1-399 RNISHYKEQL VKMFGSSMDL IDPGQ BACU002415/1-290 RNISHYEEQL VKMFGSSMDL IDPGQ ENSP00000265563/1-404 RNISHYEEQL VKMFGSSVDL GNLGQ bmy_05986T0/1-419 RNISHYEEQL VKMFGSSMDL IDPGQ ENSBTAP00000018886/1-401 RNISHYEEQL VKMFGSSMDL IDPGQ