KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:01 2014 Check: 00 .. Name: ENSP00000218652/1-336 Len: 336 Check: 6797 Weight: 1.00 Name: ENSBTAP00000018911/1-336 Len: 336 Check: 6769 Weight: 1.00 Name: bmy_01192T0/1-288 Len: 336 Check: 9272 Weight: 1.00 Name: BACU011841/1-336 Len: 336 Check: 568 Weight: 1.00 Name: ENSTTRP00000013090/1-336 Len: 336 Check: 9772 Weight: 1.00 // 1 50 ENSP00000218652/1-336 MARRRSQRVC ASGPSMLNSA RGAPELLRGT ATNAEVSAAA AGATGSEELP ENSBTAP00000018911/1-336 MGRRRTQRAC ATIPSMLSSA HGAPELRPQA AADAEVSAAS AAATGSEAAR bmy_01192T0/1-288 MGRRKTQRAC ATIPSMLSSA CGAPELRPRA AADAEVSAAS AAVTGSEVVR BACU011841/1-336 MGRRRTQRAC ATVPSMLSSA RGAPELRPRA AADAEVSAAS AAVTGSEVVR ENSTTRP00000013090/1-336 MGRRRPQRAC ATIPSMLSSA CGAPDLRPRA AADAEVSAAS AAVTGSEVVR 51 100 ENSP00000218652/1-336 PGDRGCRNGG GRGPAATTSS TGVAVGAEHG EDSLSRKPDP EPGRMDHHQP ENSBTAP00000018911/1-336 PGDRGRRNRG GRVAEATTSL KGVAEGAECR GDSPTRKPDP EPGRMDHHQA bmy_01192T0/1-288 LGDRGGRNRG GRVAAETTSS IRVTEGAERR EHSPARKPDP EPGGMDHHQP BACU011841/1-336 LGDRGGRNRG GRVAAATTSS TRVTEGAERR GHSPARKPDP EPGRMDHHQP ENSTTRP00000013090/1-336 LGDRGGTNRG GRVAAATTSS TRVTEGAERR GHSPARKPDP EPGRMDHHQP 101 150 ENSP00000218652/1-336 GTGRYQVLLN EEDNSESSAI EQPPTSNPAP QIVQAASSAP ALETDSSPPP ENSBTAP00000018911/1-336 GTGRYQVLHN EEDNSESSAV EQPSTSNPTP HTVQAAPSAS GHETESSPPP bmy_01192T0/1-288 GTGRYQVLHN EEDNSESSAV EQPSTSNPTP QNVQAAPSAS GLETDSSPPP BACU011841/1-336 GTGRYQVLHN EEDNSESSAV EQPSTSNPTP QNVQAALSAS GLETDSSPPP ENSTTRP00000013090/1-336 GTGRYQVLHN EEDNSESSAV EQPSTSDPTP QNVQAAPSAS GLETDSSPPP 151 200 ENSP00000218652/1-336 YSSITVEVPT TSDTEVYGEF YPVPPPYSVA TSLPTYDEAE KAKAAAMAAA ENSBTAP00000018911/1-336 YSSITVEVPT TSDTEVYSEF YPVPPPYSVA TSLPTYDEAE KAKAAALAAA bmy_01192T0/1-288 YSSITVEVPT TSDTDVYSGF YPVPPPYSVA TSLPTYDEAE KAKAAAMAAA BACU011841/1-336 YSSITVEVPT TSDTDVYSEF YPVPPPYSVA TSLPTYDEAE KAKAAAMAAA ENSTTRP00000013090/1-336 YSSITVEVPT TSDTEVYSEF YPVPPPYSVA TSLPTYDEAE KAKAAAMAAA 201 250 ENSP00000218652/1-336 AAETSQRIQE EECPPRDDFS DADQLRVGND GIFMLAFFMA FIFNWLGFCL ENSBTAP00000018911/1-336 AAETSQRIQE EECPPRDDFN DPDQLRVGND GIFMLAFFMA FIFNWLGFCL bmy_01192T0/1-288 AAETSQRIQE EECPTRDDFS DADQLRVGND GIFMLAFFMA FIFNWLGFCL BACU011841/1-336 AAETSQRIQE EECPTRDDFS DADQLRVGND GIFMLAFFMA FIFNWLGFCL ENSTTRP00000013090/1-336 AAETSQRIQE EECPTRDDFS DADQLRVGND GIFMLAFFMA FIFNWLGFCL 251 300 ENSP00000218652/1-336 SFCITNTIAG RYGAICGFGL SLIKWILIVR FSDYFTGYFN GQYWLWWIFL ENSBTAP00000018911/1-336 SFCITNTIAG RYGAICGFGL SLIKWILIVR FSDYFTGYFN GQYWLWWIFL bmy_01192T0/1-288 SFCITNTIAG ---------- ---------- ---------- ---------- BACU011841/1-336 SFCITNTVAG RYGAICGFGL SLIKWILIVR FSDYFTGYFN GQYWLWWIFL ENSTTRP00000013090/1-336 SFCITNTIAG RYGAICGFGL SLIKWILIVR FSDYFTGYFN GQYWLWWIFL 301 350 ENSP00000218652/1-336 VLGLLLFFRG FVNYLKVRNM SESMAAAHRT RYFFLL ENSBTAP00000018911/1-336 VLGLLLFFRG FVNYLKVRNM SESMAAAHRT RYFFLL bmy_01192T0/1-288 --------RG FVNYLKVRNM SESMAAAHRT RYFFLL BACU011841/1-336 VLGLLLFFRG FVNYLKVRNM SESMAAAHRT RYFFLL ENSTTRP00000013090/1-336 VLGLLLFFRG FVNYLKVRNM SESMAAAHRT RYFFLL