KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:01 2014 Check: 00 .. Name: bmy_06278T0/1-520 Len: 629 Check: 8673 Weight: 1.00 Name: ENSP00000347538/1-474 Len: 629 Check: 4430 Weight: 1.00 Name: ENSBTAP00000018914/1-474 Len: 629 Check: 2484 Weight: 1.00 Name: BACU012919/1-382 Len: 629 Check: 4715 Weight: 1.00 Name: ENSTTRP00000007102/1-474 Len: 629 Check: 9715 Weight: 1.00 // 1 50 bmy_06278T0/1-520 CQPRCRPDGL TRAPPPPTPF PIAVPSPASG AHGPQRLRPR PRRGRCSLRG ENSP00000347538/1-474 ---------- ---------- --------MA YI-------- ---------- ENSBTAP00000018914/1-474 ---------- ---------- --------MA YI-------- ---------- BACU012919/1-382 ---------- ---------- --MVSGKKQG FFFFFFFCWN IAKLVLSLSL ENSTTRP00000007102/1-474 ---------- ---------- --------MA YI-------- ---------- 51 100 bmy_06278T0/1-520 CPGLPPQAPR PLASLGSASG VARDSEGGRG GGPGRPSSPN LGGGPDSGSR ENSP00000347538/1-474 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018914/1-474 ---------- ---------- ---------- ---------- ---------- BACU012919/1-382 CR--PPRPLR PLALRGSLKG ---------- ---------- ---------- ENSTTRP00000007102/1-474 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_06278T0/1-520 NAGEGKDGAA DGGAGAAHQP RQSRLGPPGC LFLSFPLCFL PSLRLARAKW ENSP00000347538/1-474 ---------- ---------- ---QLEPLNE GFLS------ ---------- ENSBTAP00000018914/1-474 ---------- ---------- ---QLEPLNE GFLS------ ---------- BACU012919/1-382 ---------- ---------- ---QLEPLNE GFLS------ ---------- ENSTTRP00000007102/1-474 ---------- ---------- ---QLEPLNE GFLS------ ---------- 151 200 bmy_06278T0/1-520 PWRRHARAGV SARGRKWRTF RISDLLLCRW TCRHCCQKCY ESSCCQSSED ENSP00000347538/1-474 ---------- ---------- RISGLLLCRW TCRHCCQKCY ESSCCQSSED ENSBTAP00000018914/1-474 ---------- ---------- RISDLLLCRW TCHHCCQKCY ESSCCQSSED BACU012919/1-382 ---------- ---------- RISDLLLCRW TCRHCCQKCY ESSCCQSSED ENSTTRP00000007102/1-474 ---------- ---------- RISDLLLCRW TCRHCCQKCY ESSCCQSSED 201 250 bmy_06278T0/1-520 EVEILGPFPA QTPPWLLASR SSDKDGDSVH TASEVPLTPR TNSPDRRCSS ENSP00000347538/1-474 EVEILGPFPA QTPPWLMASR SSDKDGDSVH TASEVPLTPR TNSPDGRRSS ENSBTAP00000018914/1-474 EVEILGPFPA QTPPWLLASR SSDKDGDSVH TASDVPLTPR TNSPDRRCSS BACU012919/1-382 EVEILGPFPA QTPPWLLASR SSDKDGDSVH TASEVPLTPQ TNSPDRRCSS ENSTTRP00000007102/1-474 EVEILGPFPA QTPPWLLASR SSDKDGNSVH TASEVPLTPR TNSPDRRCSS 251 300 bmy_06278T0/1-520 SDTSKSTYSL TRRISSLDSR RPSSPLIDIK PIEFGVLSAK KEPIQPSVLR ENSP00000347538/1-474 SDTSKSTYSL TRRISSLESR RPSSPLIDIK PIEFGVLSAK KEPIQPSVLR ENSBTAP00000018914/1-474 SDTSKSTYSL TRRISSLESR RPSSPLIDIK PIEFGVLSAK KEPIQPSVLR BACU012919/1-382 SDTSKSAYSL TRRISSLDSR RPSSPLIDIK PIEFGVLSAK KEPIQPSVLR ENSTTRP00000007102/1-474 SDTSKSTYSL TRRISSLDSR RPSSPLIDIK PIEFGVLSAK KEPIQPSVLR 301 350 bmy_06278T0/1-520 RTYTPDDYFR KFEPRLYSLG SNSDDVDFLT DAEILSKYQL GMLHFSTQYD ENSP00000347538/1-474 RTYNPDDYFR KFEPHLYSLD SNSDDVDSLT DEEILSKYQL GMLHFSTQYD ENSBTAP00000018914/1-474 RTYTPDDYFR KFEPRLYSLD SNSDDVDFLT DAEILSKYQL GMLHFSTQYD BACU012919/1-382 RTYTPDDYFR KFEPRLYSLG SNSDDVDFLT DAEILSKYQL GMLHFSTQYD ENSTTRP00000007102/1-474 RTYTPDDYFR KFEPRLYSLG SNSDDVDFLT DAEILSKYQL GMLHFSTQYD 351 400 bmy_06278T0/1-520 LLHNHLTVRV IEARDLPPPI SHDGARQDMA HSNPYVKICL LPDQKNSKQT ENSP00000347538/1-474 LLHNHLTVRV IEARDLPPPI SHDGSRQDMA HSNPYVKICL LPDQKNSKQT ENSBTAP00000018914/1-474 LLHNRLTVRV IEARDLPPPI SHDGARQDMA HSNPYVKICL LPDQKNSKQT BACU012919/1-382 LLHNHLTVRV IEARDLPPPI SHDGARQDMA HSNPYVKICL LPDQKNSKQT ENSTTRP00000007102/1-474 LLHNHLTVRV IEARDLPPPI SHDGARQDMA HSNPYVKICL LPDQKNSKQT 401 450 bmy_06278T0/1-520 GVKRKTQKPV FEERYTFEIP FLEAQRRTLL LTVLDFDKFS RHCVIGKVAV ENSP00000347538/1-474 GVKRKTQKPV FEERYTFEIP FLEAQRRTLL LTVVDFDKFS RHCVIGKVSV ENSBTAP00000018914/1-474 GVKRKTQKPV FEERYTFEIP FLEAQRRTLL LTVLDFDKFS RHCVIGKVAV BACU012919/1-382 GVKRKTQKPV FEERYTFEIP FLEAQRRTLL LTVLDFDKFS RHCVIGKVAV ENSTTRP00000007102/1-474 GVKRKTQKPV FEERYTFEIP FLEAQRRTLL LTVLDFDKFS RHCVIGKVAV 451 500 bmy_06278T0/1-520 PLCEVDLVKG GHWWKALIPS SQESLQ---- ---------- ---------- ENSP00000347538/1-474 PLCEVDLVKG GHWWKALIPS SQNEVELGEL LLSLNYLPSA GRLNVDVIRA ENSBTAP00000018914/1-474 PLCEVDLVKG GHWWKALIPS SQNEVELGEL LLSLNYLPSA GRLNVDVIRA BACU012919/1-382 PLCEVDLVKG GHWWKALIPS SQ-------- ---------- ---------- ENSTTRP00000007102/1-474 PLCEVDLVKG GHWWKALIPS SQNEVELGEL LLSLNYLPSA GRLNVDVIRA 501 550 bmy_06278T0/1-520 ---------- ---------- ---------- ---SLRGELV AFF------- ENSP00000347538/1-474 KQLLQTDVSQ GSDPFVKIQL VHGLKLVKTK KTSFLRGTID PFYNESFSFK ENSBTAP00000018914/1-474 KQLLQTDVSQ GSDPFVKIQL VHGLKLVKTK KTSFLRGTID PFYNESFSFK BACU012919/1-382 ---------- ---------- ---------- ----VRGGLA ASP------- ENSTTRP00000007102/1-474 KQLLQTDVSQ GSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 551 600 bmy_06278T0/1-520 ------RSTK LIGSL--EEA KGQSDLVTKL SVS------- ---------- ENSP00000347538/1-474 VPQEELENAS LVFTVFGHNM KSSNDFIGRI VIGQYSSGPS ETNHWRRMLN ENSBTAP00000018914/1-474 VPQEELENAS LVFTVFGHNM KSSNDFIGRI VIGQYSSGPS ESNHWRRMLS BACU012919/1-382 ---------- -----LGSFL KNDYFYLSI- ---------- ---------- ENSTTRP00000007102/1-474 XXXXXXXXXX XXXXXLGHNM KSSNDFIGRI VIGQYSSGPS ESNHWRRMLS 601 650 bmy_06278T0/1-520 ---------- ---------- VGTAVLIEQ ENSP00000347538/1-474 THRTAVEQWH SLRSRAECDR VSPASLEVT ENSBTAP00000018914/1-474 AHRTAVEQWH SLRSRAECDR VSPASLEVT BACU012919/1-382 ---------- ---------- --------- ENSTTRP00000007102/1-474 AHRTAVEQWH SLRSRAECDR VSPASLEVT