KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:02 2014 Check: 00 .. Name: ENSTTRP00000005554/1-287 Len: 389 Check: 9895 Weight: 1.00 Name: ENSP00000265440/1-347 Len: 389 Check: 9102 Weight: 1.00 Name: ENSBTAP00000018918/1-317 Len: 389 Check: 2751 Weight: 1.00 Name: bmy_02480T0/1-347 Len: 389 Check: 2051 Weight: 1.00 Name: BACU016475/1-370 Len: 389 Check: 6883 Weight: 1.00 // 1 50 ENSTTRP00000005554/1-287 ---------- ---------- ---------- ---------- ---------- ENSP00000265440/1-347 ---------- ---------- ---------- ---------- --MTLDHQII ENSBTAP00000018918/1-317 ---------- ---------- ---------- ---------- --MTLDHQIL bmy_02480T0/1-347 ---------- ---------- ---------- ---------- --MTLDHQVV BACU016475/1-370 MDNEVFDYIK FAKMAVAEVP AHLESSARTQ LQKVQRQHVK PFMTLDHQVV 51 100 ENSTTRP00000005554/1-287 ---------- ---------- ---------- ---------- ---------- ENSP00000265440/1-347 NPTLKWSQPA VPSGGPLVQH AHTTLDSDAG LTENPLTKLL AIGKEDDNAQ ENSBTAP00000018918/1-317 NQSFKRSHPP TPSSELLVQH GHPSPESDTG LTGNPLTKLL TLGKEDDNTE bmy_02480T0/1-347 HQTLKRSHPP TPSSTLLVQH GHQSPESDTG LTGNPLTKLL TLGKEDDNVE BACU016475/1-370 HQTLKRSHPP TPSSALLVQH GHPSPESDTG LTGNPLTKLL TLGKEDDNVE 101 150 ENSTTRP00000005554/1-287 --MEDVIEDI IGTESSFKEE GTDSPLLMQR TLSGSILDVY SGEQGISPVN ENSP00000265440/1-347 WHMEDVIEDI IGMESSFKEE GADSPLLMQR TLSGSILDVY SGEQGISPIN ENSBTAP00000018918/1-317 WH-------- ---------- ---------- -VSGSILDVY SGEQEISPVN bmy_02480T0/1-347 WHMEDVIEDI IGMESSFKEE GTDSPLLMQR TLSGSILDVY SGEQGISPVN BACU016475/1-370 WHMEDVIGDI IGMESSFKEE GTDSPLLMQR TLSGSILDVY SGEQGISPIN 151 200 ENSTTRP00000005554/1-287 MGLTSASCPS SLPMKREITE TDTRALAKER QKKDNHNLIE RRRRYNINYR ENSP00000265440/1-347 MGLTSASCPS SLPMKREITE TDTRALAKER QKKDNHNLIE RRRRYNINYR ENSBTAP00000018918/1-317 MGLTSASCPS SLPMKREITE TDTRALAKER QKKDNHNLIE RRRRYNINYR bmy_02480T0/1-347 MGLTSASCPS SLPMKREITE TDTRALAKER QKKDNHNLIE RRRRYNINYR BACU016475/1-370 MGLTSASCPS SLPMKREIT- ---------- --------VE RRRRYNINYR 201 250 ENSTTRP00000005554/1-287 IKELGTLIPK SNDPDMRWNK GTILKASVEY IKWLQKEQQR ARELEHRQKK ENSP00000265440/1-347 IKELGTLIPK SNDPDMRWNK GTILKASVEY IKWLQKEQQR ARELEHRQKK ENSBTAP00000018918/1-317 IKELGTLIPK SNDPDMRWNK GTILKASVEY IKWLQKEQQR AQELEHRQKK bmy_02480T0/1-347 IKELGSLIPK SNDPDMRWNK GTILKASVEY IKWLQKEQQR ARELEHRQKK BACU016475/1-370 IKELGTLIPK SNDPDMRWNK GTILKASVEY IKWLQKEQQR ARELEHRQKK 251 300 ENSTTRP00000005554/1-287 LEQANRRLLL RIQELEIQAR AHXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000265440/1-347 LEQANRRLLL RIQELEIQAR THGLPTLASL GTVDLGAHVT KQQSHPEQNS ENSBTAP00000018918/1-317 LEQANRRLLL RIQELEIQAR AHGLPTLASL VTVDLGAHIT K-QTHLEQNS bmy_02480T0/1-347 LEQANRRLLL RIQELEIQAR AHGLPTLASL GTVDLGAHIT KQQAHLEQNS BACU016475/1-370 LEQANRRLLL RIQELEIQAR AHGLPTLASL GTVDLGAHIT KQQAHLEQNS 301 350 ENSTTRP00000005554/1-287 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000265440/1-347 VDYCQQLTVS QGPSPELCDQ AIAFSDPLSY FTDLSFSAAL KEEQRLDGML ENSBTAP00000018918/1-317 GDYCQQLVLS QGTSPELCDQ AMAFSDPLSH FTDLSFSAAL KEEQRLDNML bmy_02480T0/1-347 VDYCQQLVLS QGTSPELCDQ AMAFSDPLSH FTDLSFSAAL KEEQRLDDML BACU016475/1-370 VDYCQQLVLS QGTSPELCDQ AMAFSDPLSH FTDLSFSAAL KEEQRLDDML 351 400 ENSTTRP00000005554/1-287 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXDL ENSP00000265440/1-347 LDDTISPFGT DPLLSATSPA VSKESSRRSS FSSDDGDEL ENSBTAP00000018918/1-317 LDDTVSPFGT DPLLSAISPA VSKESSRRSS FSSEDGDEL bmy_02480T0/1-347 LDDTISPFGT DPLLSATSPA VSKESSRRSS FSSDDGDEL BACU016475/1-370 LDDTISPFGT DPLLSATSPA VSKESSRRSS FSSDDGDEL