KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:02 2014 Check: 00 .. Name: ENSTTRP00000010859/1-337 Len: 514 Check: 7813 Weight: 1.00 Name: ENSP00000330432/1-500 Len: 514 Check: 5518 Weight: 1.00 Name: ENSBTAP00000018933/1-508 Len: 514 Check: 1845 Weight: 1.00 Name: bmy_00980T0/1-387 Len: 514 Check: 2319 Weight: 1.00 Name: BACU013393/1-347 Len: 514 Check: 7005 Weight: 1.00 // 1 50 ENSTTRP00000010859/1-337 ---------- ---------- ---------- ---------- ---------- ENSP00000330432/1-500 MAESQLNCLD EAHVNEKVTE AQAAFYYCER RRAALEALLG GGEQAYRERL ENSBTAP00000018933/1-508 MAESQLSCLD ETHVNERVTE AQAAFYYCER RRAALEALLG GGEQAYRERV bmy_00980T0/1-387 ---------- ---------- ---------- ---------- ---------- BACU013393/1-347 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010859/1-337 ---------- ---------- ---------- ---------- ---------- ENSP00000330432/1-500 KEEQLRDFLS SPERQALRAA WSPYED--AV PAANARGKSK AKAKAPAPAP ENSBTAP00000018933/1-508 KKEQLRDFLS SQERQALRAA WSPYEDVAAA AAAAARGKSK AKAKTPAQAS bmy_00980T0/1-387 ---------- ---------- ---------- --MKWDGLDP WRPREPELTG BACU013393/1-347 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010859/1-337 ---------- ---------- ---------- ---------- ---------- ENSP00000330432/1-500 AESGESLAYW PDRSDTEVPP LDLGWTDTGF YRGVSRVTLF THPPKDEKAP ENSBTAP00000018933/1-508 AEPGESLAYW PDRSDTEVPP LDLGWTDAGF YRGVSRVTLF THPPKDEKAP bmy_00980T0/1-387 ALPESVL--- ---------- ---------- ---------- ------REAQ BACU013393/1-347 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010859/1-337 ---------- -----VIAVV MDLFTDGEIF QDIVDAASKR RVPVYIILDE ENSP00000330432/1-500 HLKQVVRQMI QQAQKVIAVV MDLFTDGDIF QDIVDAACKR RVPVYIILDE ENSBTAP00000018933/1-508 HLKQLVRQMI QQAQKVVAVV MDLFTDGEIF QDIVDAASKR RVPVYIILDE bmy_00980T0/1-387 GFAQLQGDQS TQVCKVIAVV MDLFTDGEIF QDIVDAASKR RVPVYIILDE BACU013393/1-347 ---------- -----VIAVV MDLFTDGEIF QDIVDAASKR RVPVYIILDE 201 250 ENSTTRP00000010859/1-337 AGVKYFLEMC QGLELADFRI RNIRVRSVTG VGFYMPMGKI KGTLSSKFLM ENSP00000330432/1-500 AGVKYFLEMC QDLQLTDFRI RNIRVRSVTG VGFYMPMGRI KGTLSSRFLM ENSBTAP00000018933/1-508 AGVNYFLEMC QGLELPDFRI RNIRVRSVTG VGFYMPMGKV KGTLSSKFLM bmy_00980T0/1-387 AGVKYFLEMC QGLELADFRI RNIRVRSVTG VGFYMPMGKI KGTLSSKFLM BACU013393/1-347 AGVKYFLEMC QGLELSDFRI RNIRVRSVTG VGFYMPMGKI KGTLSSKFLM 251 300 ENSTTRP00000010859/1-337 VDGDKVATGS YRFTWSSSHV DRNLLLLLTG QNVEPFDVEF RELYAISEEV ENSP00000330432/1-500 VDGDKVATGS YRFTWSSSHV DRNLLLLLTG QNVEPFDTEF RELYAISEEV ENSBTAP00000018933/1-508 VDGDKVATGS FSFTWSSSHV DRNLLLLLTG QHVEPFDVEF RELYAISEEV bmy_00980T0/1-387 VDGEKVATGS YRFTWSSSHV DRNLLLLLTG QNVEPFDVEF RELYAISKEV BACU013393/1-347 VDGEKVATGS YRFTWSSSHV DRNLLLLLTG QNVEPFDVEF RELYAVSEEV 301 350 ENSTTRP00000010859/1-337 DLYQQLGLAG GAGRLGLNYS STVARKLINP KYTLVTGSHH PPGEMMRWAA ENSP00000330432/1-500 DLYRQLSL-- -AGRVGLHYS STVARKLINP KYALVSGCRH PPGEMMRWAA ENSBTAP00000018933/1-508 NLYQQLGLAG GAGRPGLHYS STVARKLINP KYALVAGSRP PPGEMMRWAA bmy_00980T0/1-387 DLYQQLGLAG GAGRLGLNYS STVARKLINP KYTLVAGSRH PPGEMMRWAA BACU013393/1-347 DLYQQLGLAG GAGRLGLNYA STVARKLINP KYTLVAGGRH PPGEMMRWAA 351 400 ENSTTRP00000010859/1-337 RQQQEASRNA EGQEEGTKGG ESARRLDSFL LHLFTLEQVX XXXXXXXXXX ENSP00000330432/1-500 RQQREAGGNP EGQEEGASGG ESAWRLESFL KDLVTVEQVL PPVEPIPLGE ENSBTAP00000018933/1-508 RQQQEASGRA EGQEEGGK-G ESARRLESFL HDLATLEQVL PPVEPVPLGE bmy_00980T0/1-387 RQQREASSNA EGQEEGSKGG ESARRLESFL HDLVTLEQVL PPVEPVLSGE BACU013393/1-347 RQQREAGSNA EGQEEGSKGG ESARRLESFL HDLVTLEQVL PPVEPVLSGE 401 450 ENSTTRP00000010859/1-337 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ---XXFSSRF ENSP00000330432/1-500 LSQKDGRMVS HMHRDLKPKS REAPSRNGMG EAARGEAAPA ---RRFSSRL ENSBTAP00000018933/1-508 LSRRDARGVS HLHTDLKSRP REALARNGKG EAANGEATLA KEGRRFGSRI bmy_00980T0/1-387 LSR-DGRVVS HLCVDLKPRP REALARNSRG EAANGEATAA KEGRRFSSRF BACU013393/1-347 LSQ-DGRVVS HLRVDLKPRP REALARNGRG EAANGEATAA KEGRRFSSRF 451 500 ENSTTRP00000010859/1-337 SA--VKRPAA -NSTASAPSP EA-SEAEFMA GKRPNQGSSG NVSGKTSSSP ENSP00000330432/1-500 FSRRAKRPAA PNGMASSVST ET-SEVEFLT GKRPNENSSA DISGKTSPSS ENSBTAP00000018933/1-508 FSRRSKRPAA PNGTASALSP KALAEAEFMT GKRPNEGSSA DVSGESCPAA bmy_00980T0/1-387 FSRRSKRPAA PNSTAGALSP KALAEAEFVT GKRPNQGSSD NVSVSLSIRF BACU013393/1-347 FSRRSKRPAA PNSTAGALSP EALAEAEFVT GKRPNQGSS- DVSGEPLPPG 501 550 ENSTTRP00000010859/1-337 A---KASNCV IL-- ENSP00000330432/1-500 A---KPSNCV IS-- ENSBTAP00000018933/1-508 P---HPQHHP QG-- bmy_00980T0/1-387 P---CLDDLN GH-- BACU013393/1-347 PGLLRPLALV QEHC