KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:03 2014 Check: 00 .. Name: bmy_05870T0/1-284 Len: 517 Check: 2800 Weight: 1.00 Name: ENSP00000362590/1-505 Len: 517 Check: 1245 Weight: 1.00 Name: ENSTTRP00000003773/1-487 Len: 517 Check: 3823 Weight: 1.00 Name: BACU018021/1-516 Len: 517 Check: 5397 Weight: 1.00 Name: ENSBTAP00000018938/1-505 Len: 517 Check: 1999 Weight: 1.00 // 1 50 bmy_05870T0/1-284 ---------- ---------- ------MHHM RNGNGYFLFE EERSKVSTVP ENSP00000362590/1-505 MAAENSKQFW KRSAKLPGSI QPVYGAQHPP LDPRLTKNFI KERSKVNTVP ENSTTRP00000003773/1-487 ---------- ---------I QPVYGAQHPP LDPRLTKNFI KERSKVSTVP BACU018021/1-516 MAADNSKQFW KRSAKLPGSI QPVYGAQHPP LDPRLTKNFI KERSKVSTVP ENSBTAP00000018938/1-505 MAAENSKQFW KRSAKLPGSI QPVYGAQHPP LDPRLTKNFI KERSKVSTVP 51 100 bmy_05870T0/1-284 LKNKKASSFH EFARNTSDAW DIGDDEEEDF SSPSFQTLNS KVALATAAQV ENSP00000362590/1-505 LKNKKASSFH EFARNTSDAW DIGDDEEEDF SSPSFQTLNS KVALATAAQV ENSTTRP00000003773/1-487 LKNKKASSFH EFARNTSDAW DIGDDEEEDF SSPSFQTLNS KVALATAAQV BACU018021/1-516 LKNKKASSFH EFARNTSDAW DIGDDEEEDF SSPSFQTLNS KVALATAAQV ENSBTAP00000018938/1-505 LKNKKASSFH EFARNTSDAW DIGDDEEEDF SSPAFQTLNS KVALATAAQV 101 150 bmy_05870T0/1-284 LENHSKLRVK PERSQSTTSD VPASYKVIKS SSDAQLSRNS ---------- ENSP00000362590/1-505 LENHSKLRVK PERSQSTTSD VPANYKVIKS SSDAQLSRNS SDTCLRNPLH ENSTTRP00000003773/1-487 LENHSKLRVR PERSQSTTSE VPASHKVIKS SSDAQLSRNS SDTCLRNPLH BACU018021/1-516 LENHSKLRVK PERSQSTTSD VPASYKVIKS SSDAQLSRNS SDTCLRNPLH ENSBTAP00000018938/1-505 LENHSKLRVK PERSQSTTSD VPASYKVIKS SSDAQLSRNS SDSCLRNPLH 151 200 bmy_05870T0/1-284 ---------- ---------- ---------- ---------- ---------- ENSP00000362590/1-505 KQQSLPLRPI IPLVARISDQ NASGAPPMTV REKTRLEKFR QLLSSQNTDL ENSTTRP00000003773/1-487 KQQSLPLRPI IPLVARISDQ NASGAPPMTV REKTRLEKFR QLLSSHNTDL BACU018021/1-516 KQQSLPLRPI IPLVARISDQ NASGAPPMTV REKTRLEKFR QLLSSHNTDL ENSBTAP00000018938/1-505 KQQSLPLRPV IPLVARISDQ NASGAPPMTV REKTRLEKFR QLLSSHNTDL 201 250 bmy_05870T0/1-284 NELRKCSWPG VPREVRPVTW RLLSGYLPAN TERRKLT-LQ RKREEYFGFI ENSP00000362590/1-505 DELRKCSWPG VPREVRPITW RLLSGYLPAN TERRKLT-LQ RKREEYFGFI ENSTTRP00000003773/1-487 DELRKCSWPG VPREVRPVTW RLLSGYLPAN TERRKLIFLQ RKREEYFGFI BACU018021/1-516 DELRKCSWPG VPREVRPVTW RLLSGYLPAN TERRKLT-LQ RKREEYFGFI ENSBTAP00000018938/1-505 DELRKCSWPG VPREVRPVTW RLLSGYLPAN TERRKLT-LQ RKREEYFGFI 251 300 bmy_05870T0/1-284 EQYYDSRNEE HHQDTYRQIH IDIPRTNPLI PLFQQPLVQE IFERILFIWA ENSP00000362590/1-505 EQYYDSRNEE HHQDTYRQIH IDIPRTNPLI PLFQQPLVQE IFERILFIWA ENSTTRP00000003773/1-487 EQYYDSRNEE HHQDTYRQIH IDIPRTNPLI PLFQQPLVQE IFERILFIWA BACU018021/1-516 EQYYDSRNEE HHQDTYRQIH IDIPRTNPLI PLFQQPLVQE IFERILFIWA ENSBTAP00000018938/1-505 EQYYDSRNEE HHQDTYRQIH IDIPRTNPLI PLFQQPLVQE IFERILFIWA 301 350 bmy_05870T0/1-284 IRHPASGYVQ GINDLVTPFF VVFLSEYV-- ---------- ---------- ENSP00000362590/1-505 IRHPASGYVQ GINDLVTPFF VVFLSEYV-- ---------E EDVENFDVTN ENSTTRP00000003773/1-487 IRHPASGYVQ GINDLVTPFF VVFLSEYV-- ---------E EDVENFDVTN BACU018021/1-516 IRHPASGYVQ GINDLVTPFF VVFLSEYVVP YPSKAATVRE EDVENFDVTN ENSBTAP00000018938/1-505 IRHPASGYVQ GINDLVTPFF VVFLSEYV-- ---------E EDVENFDVTN 351 400 bmy_05870T0/1-284 ---------- ---------- -----ECSQW ARLAEKERV- ALE------- ENSP00000362590/1-505 LSQDMLRSIE ADSFWCMSKL LDGIQDNYTF AQPGIQKKVK ALEELVSRID ENSTTRP00000003773/1-487 LSQDMLRSIE ADSFWCMSKL LDGIQDNYTF AQPGIQKKVK ALEELVSRID BACU018021/1-516 LSQDMLRSIE ADSFWCMSKL LDGIQDNYTF AQPGIQKKVK ALEELVSRID ENSBTAP00000018938/1-505 LSQDMLRSIE ADSFWCMSKL LDGIQDNYTF AQPGIQKKVK ALEELVSRID 401 450 bmy_05870T0/1-284 ---------- ---------- ---------- ---------- -YTAKP---- ENSP00000362590/1-505 EQVHNHFRRY EVEYLQFAFR WMNNLLMREL PLRCTIRLWD TYQSEPEGFS ENSTTRP00000003773/1-487 EQVHNHFRRY EVEYLQFAFR WMNNLLMREL PLRCTIRLWD TYQSEPEGFS BACU018021/1-516 EQVHNHFRRY EVEYLQFAFR WMNNLLMREL PLRCTIRLWD TYQSEPEGFS ENSBTAP00000018938/1-505 EQVHNHFRRY EVEYLQFAFR WMNNLLMREL PLRCTIRLWD TYQSEPEGFS 451 500 bmy_05870T0/1-284 ----VLTAAA AAAW------ --NFS--LEM VTDLT----- ---------- ENSP00000362590/1-505 HFHLYVCAAF LIKWRKEILD EEDFQGLLML LQNLPTIHWG NEEIGLLLAE ENSTTRP00000003773/1-487 HFHLYVCAAF LIKWRKEILD EEDFQGLLML LQNLPTIHWG NEEIGLLLAE BACU018021/1-516 HFHLYVCAAF LIKWRKEILD EEDFQGLLML LQNLPTIHWG NEEIGLLLAE ENSBTAP00000018938/1-505 HFHLYVCAAF LIKWRKEILD EEDFQGLLML LQNLPTIHWG NEEIGLLLAE 501 550 bmy_05870T0/1-284 ---------- ------- ENSP00000362590/1-505 AYRLKYMFAD APNHYRR ENSTTRP00000003773/1-487 AYRLKYMFAD APNHYRR BACU018021/1-516 AYRLKYMFAD APNHYRR ENSBTAP00000018938/1-505 AYRLKYMFAD APNHYRR