KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:09 2014 Check: 00 .. Name: ENSP00000274813/1-750 Len: 750 Check: 8659 Weight: 1.00 Name: ENSBTAP00000018963/1-750 Len: 750 Check: 433 Weight: 1.00 Name: ENSTTRP00000003279/1-749 Len: 750 Check: 9122 Weight: 1.00 Name: bmy_13140T0/1-597 Len: 750 Check: 7449 Weight: 1.00 Name: BACU015842/1-750 Len: 750 Check: 1872 Weight: 1.00 // 1 50 ENSP00000274813/1-750 MLRAKNQLFL LSPHYLRQVK ESSGSRLIQQ RLLHQQQPLH PEWAALAKKQ ENSBTAP00000018963/1-750 MLRAKTRLFL LSPNHLRQLK GSSGSRLIWQ RLLHQQQPLH PEWAALAKKQ ENSTTRP00000003279/1-749 MLTAKSRLFL LSPHHLKQLK ESSGSRLIWQ RLLHQQQPLH PEWAALAKKQ bmy_13140T0/1-597 ---------- ---------- ---------- ---------M PDS------- BACU015842/1-750 MLRAKSRLSL LSPHHLKQRK ESSGSRLLWQ RLLHRQQPLH PEWAALAKKQ 51 100 ENSP00000274813/1-750 LKGKNPEDLI WHTPEGISIK PLYSKRDTMD LPEELPGVKP FTRGPYPTMY ENSBTAP00000018963/1-750 LKGKNPEELI WHTPEGISIK PLYSSRDTKD FPEELPGMKP FTRGPYPTMY ENSTTRP00000003279/1-749 LKGKNPEELI WHTPEGISIK PLYSSRDTKD LPEELPGVKP FTRGPYPTMY bmy_13140T0/1-597 ---------- ---------- ---------- ---------- -----NPTLF BACU015842/1-750 LKGKSPEELI WHTPEGVSMK PLYSSRDTKG LPEELPGVKP FTRGPYPTMY 101 150 ENSP00000274813/1-750 TFRPWTIRQY AGFSTVEESN KFYKDNIKAG QQGLSVAFDL ATHRGYDSDN ENSBTAP00000018963/1-750 TFRPWTIRQY AGFSTVEESN KFYKDNIKAG QQGLSVAFDL ATHRGYDSDN ENSTTRP00000003279/1-749 TFRPWTIRQY AGFSTVEESN KFYKDNIKAG QQGLSVAFDL ATHRGYDSDN bmy_13140T0/1-597 FF-------- ---------- -IY----LAG QQGLSVAFDL ATHRGYDSDN BACU015842/1-750 TFRPWTIRQY AGFSTVEESN TFYKDNIKAG QQGLSVAFDL ATHRGYDSDN 151 200 ENSP00000274813/1-750 PRVRGDVGMA GVAIDTVEDT KILFDGIPLE KMSVSMTMNG AVIPVLANFI ENSBTAP00000018963/1-750 PRVRGDVGMA GVAIDTVEDT KILFDGIPLE KMSVSMTMNG AVIPVLATFI ENSTTRP00000003279/1-749 PRVRGDVGMA GVAIDTVEDT KILFNGIPLE KMSVSMTMNG AVIPVLATFI bmy_13140T0/1-597 PRVRGDVGMA GVAIDTVEDT KILFNGIPLE KMSVSMTMNG AVIPVLATFI BACU015842/1-750 PRVRGDVGMA GVAIDTVEDT KILFNGIPLE KMSVSMTMNG AVIPVLATFI 201 250 ENSP00000274813/1-750 VTGEEQGVPK EKLTGTIQND ILKEFMVRNT YIFPPEPSMK IIADIFEYTA ENSBTAP00000018963/1-750 VTGEEQGVPK EKLTGTIQND ILKEFMVRNT YIFPPEPSMK IIADIFQYTA ENSTTRP00000003279/1-749 VTGEEQGVPK EKLTGTIQND ILKEFMVRNT Y-FPPEPSMK IIADIFQYTA bmy_13140T0/1-597 VTGEEQGVPK EKLTGTIQND ILKEFMVRNT YIFPPEPSMK IIADIFQYTA BACU015842/1-750 VTGEEQGVPK EKLTGTIQND ILKEFMVRNT YIFPPEPSMK IIADIFQYTA 251 300 ENSP00000274813/1-750 KHMPKFNSIS ISGYHMQEAG ADAILELAYT LADGLEYSRT GLQAGLTIDE ENSBTAP00000018963/1-750 KHMPKFNSIS ISGYHMQEAG ADAILELAYT IADGLEYCRT GLQAGLTIDE ENSTTRP00000003279/1-749 KHMPKFNSIS ISGYHMQEAG ADAILELAYT VADGLEYCRT GLQAGLTIDE bmy_13140T0/1-597 KHMPKFNSIS ISGYHMQEAG ADAILELAYT VADGLEYCRT GLQAGLTIDE BACU015842/1-750 KHMPKFNSIS ISGYHMQEAG ADAILELAYT VADGLEYCRT GLQAGLTIDE 301 350 ENSP00000274813/1-750 FAPRLSFFWG IGMNFYMEIA KMRAGRRLWA HLIEKMFQPK NSKSLLLRAH ENSBTAP00000018963/1-750 FAPRLSFFWG IGMNFYMEIA KMRAGRRLWA HLIEKMFQPK NSKSLLLRAH ENSTTRP00000003279/1-749 FAPRLSFFWG IGMNFYMEIA KMRAGRRLWA HLIEKMFKPK DSKSLLLRAH bmy_13140T0/1-597 FAPRLSFFWG IGMNFYMEIA KMRAGRRLWA HLIEKMFKPK NSKSLLLRAH BACU015842/1-750 FAPRLSFFWG IGMNFYMEIA KMRAGRRLWA HLIEKMFKPK NSKSLLLRAH 351 400 ENSP00000274813/1-750 CQTSGWSLTE QDPYNNIVRT AIEAMAAVFG GTQSLHTNSF DEALGLPTVK ENSBTAP00000018963/1-750 CQTSGWSLTE QDPYNNIIRT TIEAMAAVFG GTQSLHTNSF DEALGLPTVK ENSTTRP00000003279/1-749 CQTSGWSLTE QDPYNNIIRT TVEAMAAVFG GTQSLHTNSF DEALGLPTVK bmy_13140T0/1-597 CQTSGWSLTE QDPYNNIIRT AVEAMAAVFG GTQSLHTNSF DEALGLPTVK BACU015842/1-750 CQTSGWSLTE QDPYNNIIRT TVEAMAAVFG GTQSLHTNSF DEALGLPTVK 401 450 ENSP00000274813/1-750 SARIARNTQI IIQEESGIPK VADPWGGSYM MECLTNDVYD AALKLINEIE ENSBTAP00000018963/1-750 SARIARNTQI IIQEESGIPK VADPWGGSYM MESLTNDIYD AALKLINEIE ENSTTRP00000003279/1-749 SARIARNTQI IIQEESGIPK VADPWGGSYM MESLTNDVYD AALKLINEIE bmy_13140T0/1-597 SARIARNTQI IIQEESGIPK VADPWGGSYM MESLTNDVYD AALKLINEIE BACU015842/1-750 SARIARNTQI IIQEESGIPK VADPWGGSYM MESLTNDVYD AALKLINEIE 451 500 ENSP00000274813/1-750 EMGGMAKAVA EGIPKLRIEE CAARRQARID SGSEVIVGVN KYQLEKEDAV ENSBTAP00000018963/1-750 EMGGMAKAVA EGIPKLRIEE CAARRQARID SGSEVIVGVN KYQLEKEESV ENSTTRP00000003279/1-749 EMGGMAKAVA EGIPKLRIEE CAARRQARKV SGSEVIVGVN KYQLEKEESV bmy_13140T0/1-597 EMGGMAKAVA EGIPKLRIEE CAARRQARID SGSEVIVGVN KYQLEKEESV BACU015842/1-750 EMGGMAKAVA EGIPKLRIEE CAARRQARID SGSEVIVGVN KYQLEKEESV 501 550 ENSP00000274813/1-750 EVLAIDNTSV RNRQIEKLKK IKSSRDQALA ERCLAALTEC AASGDGNILA ENSBTAP00000018963/1-750 DVLAIDNTSV RNKQIEKLKK VKSSRDQALA ERCLDALTAC AASGDGNILA ENSTTRP00000003279/1-749 DVLAIDNTSV RNKQIEKLKK VKSSRDQALA ERCLTALTAC AASGDGNILA bmy_13140T0/1-597 DV-------- ---------- -KSSRDQALA ERCLTALTAC AASGDGNILA BACU015842/1-750 DVLAIDNTSV RNKQIEKLKK VKSSRDQALA ERCLTALTAC AASGDGNILA 551 600 ENSP00000274813/1-750 LAVDASRARC TVGEITDALK KVFGEHKAND RMVSGAYRQE FGESKEITSA ENSBTAP00000018963/1-750 LAVDATRARC TVGEITYAMK KVFGEHKAND RMVSGAYRQE FGESKEIAFA ENSTTRP00000003279/1-749 LAVDAARARC TVGEITDAMK KVFGEHKASD RMVSGAYRQE FGESKEISFA bmy_13140T0/1-597 LAVDATRARC TVGEITDAMK KVFGEHKASD RMVSGAYRQE FGESKEISFA BACU015842/1-750 LAVDATRARC TVGEITDAMK KVFGEHKASD RMVSGAYRQE FGESKEISFA 601 650 ENSP00000274813/1-750 IKRVHKFMER EGRRPRLLVA KMGQDGHDRG AKVIATGFAD LGFDVDIGPL ENSBTAP00000018963/1-750 IKRVEKFMER EGRRPRLLVA KMGQDGHDRG AKVIATGFAD LGFDVDIGPL ENSTTRP00000003279/1-749 IKRVQKFMES EGRRPRLLVA KMGQDGHDRG AKVIATGFAD LGFDVDIGPL bmy_13140T0/1-597 IKRVQKFMEC EGRRPRLLVA KMGQDGHDRG AK-------- ---------- BACU015842/1-750 IKRVQKFMEC EGRRPRLLVA KMGQDGHDRG AKVIATGFAD LGFDVDIGPL 651 700 ENSP00000274813/1-750 FQTPREVAQQ AVDADVHAVG ISTLAAGHKT LVPELIKELN SLGRPDILVM ENSBTAP00000018963/1-750 FQTPREVAQQ AVDADVHTVG VSTLAAGHKT LVPELIKELN ALGRPDILVM ENSTTRP00000003279/1-749 FQTPREVAQQ AVDADVHAVG VSTLAAGHKT LVPELIKELN ALGRPDILVM bmy_13140T0/1-597 --TPREVAQQ AVDADVHAVG VSTLAAGHKT LVPELIKELS ALGRPDILVM BACU015842/1-750 FQTPREVAQQ AVDADVHAVG VSTLAAGHKT LVPELIKELS ALGRPDILVM 701 750 ENSP00000274813/1-750 CGGVIPPQDY EFLFEVGVSN VFGPGTRIPK AAVQVLDDIE KCLEKKQQSV ENSBTAP00000018963/1-750 CGGVIPPQDY EFLFEVGVSN VFGPGTRIPK AAVQVLDDIE KCLEKKQQSI ENSTTRP00000003279/1-749 CGGVIPPQDY EFLLKVGVSK VFGPGTRIPK AAVQVLDDIE KCLEKKQQSM bmy_13140T0/1-597 CGGVIPPQDY EFLFKVGVSN VFGPGTRIPK AAVQVLDDIE KCLEKKQQSI BACU015842/1-750 CGGVIPPQDY EFLFKVGVSN VFGPGTRIPK AAVQVLDDIE KCLEKKQQSI