KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:13 2014 Check: 00 .. Name: ENSP00000287727/1-1425 Len: 1428 Check: 6095 Weight: 1.00 Name: ENSBTAP00000018986/1-1424 Len: 1428 Check: 5363 Weight: 1.00 Name: ENSTTRP00000015273/1-1422 Len: 1428 Check: 1938 Weight: 1.00 Name: bmy_09985T0/1-724 Len: 1428 Check: 7399 Weight: 1.00 Name: BACU000269/1-1403 Len: 1428 Check: 8609 Weight: 1.00 // 1 50 ENSP00000287727/1-1425 MENYFQAEAY NLDKVLDEFE QNEDETVSST LLDTKWNKIL DPPSHRLSFN ENSBTAP00000018986/1-1424 MENYFQAEAY NLDKVLDEFE QNEDETVSPI LLDTKWNKIL DPSSRQLSFN ENSTTRP00000015273/1-1422 MENYFQAEAY NLDKVLDEFE QNEDETVSPI LLDTRWNKIL DPPSPRLSFN bmy_09985T0/1-724 MENYFQAEAY NLDKVLDEFE QNEDETVSPI LLDTRWNKIL DPPSXRLSFS BACU000269/1-1403 MENYFQAEAY NLDKVLDEFE QNEDETVSPI LLDTRWNKIL DPPSPRLSFS 51 100 ENSP00000287727/1-1425 PTLASVNESA VSNESQPQLK VFSLAHSAPL TTEEEDHCAN GQDCNLNPEI ENSBTAP00000018986/1-1424 SALTSVNEPT VS-ESQPQLK VFSLAHSAPP DSEGEDHCAN GQDCSLNPEI ENSTTRP00000015273/1-1422 PALASVNEPT VS-ESQPRLK VFSLAHSAPL NTEGEDHCAN GQDCSLNPET bmy_09985T0/1-724 PALASVNEPT VS-ESQPQLK VFSLAHSAPL NTEGEDHCAN GQDCSLNPEI BACU000269/1-1403 PALASVNEPT VS-ESQPQLK VFSLAHSAPL NTEGEDHCAN GQDCSLNPEI 101 150 ENSP00000287727/1-1425 ATMWIDENAV AEDQLIKRNY SWDDQCSAVE VGEKKCGNLA CLPDEKNVLV ENSBTAP00000018986/1-1424 NTMWIDENAV TEDQLIKRNC SRDDQCSTVE VGEKKCGNLA CLPDEKNVLV ENSTTRP00000015273/1-1422 NTMWIDENAV AEDQLIKRNC NQDDQCGTVE VGEKKCGNLP CLPDEKSVLV bmy_09985T0/1-724 NTMWIDENAV AEDQLIKRNC NQDDQCSTVE VGEKKCGNLA CLPDEKSVLV BACU000269/1-1403 NTMWIDENAV AEDQLIKRNC NQDDQCSTVE VGEKKCGNLA CLPDEKSVLV 151 200 ENSP00000287727/1-1425 VAVMHNCDKR TLQNDLQDCN NYNSQSLMDA FSCSLDNENR QTDQFSFSIN ENSBTAP00000018986/1-1424 VAVMHNCDKR TFQSDLQDCN NYNSQSLKNA FSCSLDNENR QTDQFSFSIN ENSTTRP00000015273/1-1422 VAVMHNCDKR TLQSDLQDCN NYNSQSLMDA FSCSLDNENR QTDQFSLSVN bmy_09985T0/1-724 VAVMHNCDKR TLQSDLQDCN NYNXQSLMDA FSCSLDNENR QTDQFSLSVN BACU000269/1-1403 VAVMHNCDKR TLQSDLQDCN NYNSQSLMDA FSCSLDNENR QTDQFSLSVN 201 250 ENSP00000287727/1-1425 ESTEKDMNSE KQMDPLNRPK TEGRSVNHLC PTSSDSLASV CSPSQLKDDG ENSBTAP00000018986/1-1424 GSTEKDMNSE KQMDPLNRPN AEGDSDKYIC TT-SDNLASV CSPSQLQDDE ENSTTRP00000015273/1-1422 GSTEKDMNSE KQMDPLSRPN AEGDSVKYIC TASSDNLANV CTPSQLQDDE bmy_09985T0/1-724 GSTEKEMNSE KQMDPLSRPN AEGDSVKYIC TTSSDNVASV CSPSQLQDDE BACU000269/1-1403 GSTEKDMNSE KQVDPLSRPN AEGDSVKYIC TTSSDNLASV CSPSQLQDDE 251 300 ENSP00000287727/1-1425 SIGRDPSMSA ITSLTVDSVI SSQGTDGCPA VKKQENYIPD EDLTGKISSP ENSBTAP00000018986/1-1424 NIDRDPSMSV ITSLTLDSVI SSQRTEEGPD V-KQEDSTPD EVLTGKTSSP ENSTTRP00000015273/1-1422 NIDRDPTMSV ITSLTPDSVI SSQGTDEGPA V-KQEDSTPD EVLTGKTSSP bmy_09985T0/1-724 NIDRDPTMSV ITSLTPDSVI SSQGTDEGPA V-KQEDSTPD EVLTGKTSSP BACU000269/1-1403 NIDRDPTMSV ITSLTPDSVI SSQGTDEGPA V-KQEDSTPD EVLTGRTSSP 301 350 ENSP00000287727/1-1425 RTDLGSPNSF SHMSEGILMK KEPAEESTTE ESLRSGLPLL LKPDMPNGSG ENSBTAP00000018986/1-1424 RTDLGSPNSF SHLSEEILMK KEPSEERTTE ESTQSALPLL LKTDMPNGSG ENSTTRP00000015273/1-1422 RTDLGSPNSF SHLSEGILMK KEPAEERTTE ESIQSGLPLL LKADMPNGSG bmy_09985T0/1-724 RTDLGSPNSF SHLSEGILMK KEPAEERTTE ESIQSGLPLL LKADMPNGSG BACU000269/1-1403 RTDLGSPNSF SHLSEGILMK KEPAEERTTE ESIQSGLPLL LKADMPNGSG 351 400 ENSP00000287727/1-1425 RNNDCERCSD CLVPNEVRAD ENEGYEHEET LGTTEFLNMT EHFSESQDMT ENSBTAP00000018986/1-1424 RDDNSEQVSD CLVPSEGKAD DKEGCKHEEI LGTKEFLNMT EHFSESQEMT ENSTTRP00000015273/1-1422 RDDNGEQFSD CLVPGEVRAD ENEGCKHEEI LGTTELLNMT EHFSESQEMI bmy_09985T0/1-724 RDDNCEQFSD CLVPGEVRAD ENEGCKHEEI LGTTELLNMT EHFSESQEMT BACU000269/1-1403 RDDNCEQFSD CLVPGEVRAD ENEGCKHEEI LGTTELLNMT EHFSESQEMT 401 450 ENSP00000287727/1-1425 NWKLTKLNEM NDSQVNEEKE KFLQISQPED TNGDSGGQCV GLADAGLDLK ENSBTAP00000018986/1-1424 NWKLTKPNKM NDSQVKKDNE KFLQMNQPED TCDDS-GECD RMAEAGLDLK ENSTTRP00000015273/1-1422 NWKLTKPNKM NDSQVNKENE KFLHMNQPED TYDDSGGECD RMAEAGLDLK bmy_09985T0/1-724 NWKLTKPNKM NDSKVNKENE KFLHMNQPED TYDDSGGECD RMAEAGLDLK BACU000269/1-1403 NWKLTKPNKM NDSQVNKENE KFLHMNQPED TYDDSGGECD RMAEAGLDLK 451 500 ENSP00000287727/1-1425 GTCISESEEC DFSTVIDTPA ANYLSNGCDS YGMQDPGVSF VPKTLPSKED ENSBTAP00000018986/1-1424 GTCVNESEGC DFSTVMDTPA ANSLSNCCDS YGMQSPVVCF VPKTLPSKED ENSTTRP00000015273/1-1422 QTCMNESEGC DFSTVMDTPA ANSLSNCCDS YGMQSPVVCF VPKTLPSKED bmy_09985T0/1-724 QTCMNESEGC DFSTVMDTPA ANSLSNCCDS YGMQSPVVCF VPKTLPSKED BACU000269/1-1403 QTCMNESEGC DFSSVMDTPA ANSLSNCCDS YGMQSPVVCF VPKTLPSKED 501 550 ENSP00000287727/1-1425 SVTEEKEIEE SKSECYSNIY EQRGNEATEG SGLLLNSTGD LMKKNYLHNF ENSBTAP00000018986/1-1424 SVTEEKEIEE SKSECYSNIY EQRGNEATEG SGLLLNSTGD LTKKNYLHNF ENSTTRP00000015273/1-1422 SVTEEKEIEE SKSECYSNIY EQRGNEATEG SGLLLNSTGD LMKKNYLHNF bmy_09985T0/1-724 SVTEEKEIEE SKSECYSNIY EQRGNEATEG SGLLLNSTGD LMKKNYLHNF BACU000269/1-1403 SVTEEKEIEE SKSECYSNIY EQRGNEATEG SGLLLNSTGD LMKKNYLHNF 551 600 ENSP00000287727/1-1425 CSQVPSVLGQ SSPKVVASLP SISVPFGGAR PKQPSNLKLQ IPKPLSDHLQ ENSBTAP00000018986/1-1424 CSQVPSVLGQ SSPKIVANLQ SISVPFGGAR PKQPSNLKLQ IPKPLSDHLQ ENSTTRP00000015273/1-1422 CSQVPSVLGQ SSPKIVANLQ SISVPFGGAR PKQPSNLKLQ IPKPLSDHLQ bmy_09985T0/1-724 CSQVPSVLGQ SSPKIVANLQ SISVPFGGAR PKQPSNLKLQ IPKPLSDHLQ BACU000269/1-1403 CSQVPSVLGQ SSPKIVANLQ SISVPFGGAR PKQPSNLKLQ IPKPLSDHLQ 601 650 ENSP00000287727/1-1425 NDFPANSGNN TKNKNDILGK AKLGENSATN VCSPSLGNIS NVDTNGEHLE ENSBTAP00000018986/1-1424 NDLPANSGNT AKNKNDVLGK AKLGENSATN VCNASSGNIS IADTNGDHLE ENSTTRP00000015273/1-1422 NDLPANNGNN IKNKNDVLGK AKLGENSATN VCNASLGNIS IADTNGEHLE bmy_09985T0/1-724 NDLPANNGNN IKNKNDVLGK AKSGENSATN VCNASLGNIS IADTNGEHLE BACU000269/1-1403 NDLPANNGNN IKNKNDVLGK AKSGENSATN VCNASLGNIS IADTNGEHLE 651 700 ENSP00000287727/1-1425 SYEAEISTRP CLALAPDSPD NDLRAGQFGI SARKPFTTLG EVAPVWVPDS ENSBTAP00000018986/1-1424 SYESGISSRP CLALAPESPD NDLRAGQFGI SARKPFTTLG EVAPVWVPDS ENSTTRP00000015273/1-1422 SYESGISSRQ CVALPPESPD NDLRAGQFGI SARKPFTTLG EVAPVWVPDS bmy_09985T0/1-724 SYESGISSRQ CVALPPESPD NDLRAGQFGI SARKPFTTLG EVAPVWVPDS BACU000269/1-1403 SYESGISSRQ CVALPPESPD NDLRAGQFGI SARKPFTTLG EVAPVWVPDS 701 750 ENSP00000287727/1-1425 QAPNCMKCEA RFTFTKRRHH CRACGKVFCA SCCSLKCKLL YMDRKEARVC ENSBTAP00000018986/1-1424 QAPNCMKCEA RFTFTKRRHH CRACGKVFCA SCCSLKCKLL YMDRKEARVC ENSTTRP00000015273/1-1422 QAPNCMKCEA RFTFTKRRHH CRACGKVFCA SCCSLKCKLL YMDRKEARVC bmy_09985T0/1-724 QAPNCMKCEA RFTFTKRRHH CRACGK---- ---------- ---------- BACU000269/1-1403 QAPNCMKCEA RFTFTKRRHH CRACGKVFCA SCCSLKCKLL YMDRKEARVC 751 800 ENSP00000287727/1-1425 VICHSVLMNA QAWENMMSAS SQSPNPNNPA EYCSTIPPLQ QAQASGALSS ENSBTAP00000018986/1-1424 VICHSVLMNA QAWENMMSAS SQSPNPNNPA EYCSTIPPLQ QAQASGALSS ENSTTRP00000015273/1-1422 VICHSVLMNA QAWENMMSAS SQSPNPNNPA EYCSTIPPLQ QAQASGALSS bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 VICHSVLMN- ---------- ---------X EYCSTIPPLQ QAQASGALSS 801 850 ENSP00000287727/1-1425 PPPTVMVPVG VLKHPGAE-- -VAQPREQRR VWFADGILPN GEVADAAKLT ENSBTAP00000018986/1-1424 PPPTVMVPVG VLKHPGAEAP QVAQPREQRR VWFADGILPN GEVADAAKLT ENSTTRP00000015273/1-1422 PPPTVMVPVG VLKHPGAE-- -VAQPREQRR VWFADGILPN GEVADAAKLT bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 PPPTVMVPVG VLKHPGAE-- -VAQPREQRR VWFADGILPN GEVADAAKLT 851 900 ENSP00000287727/1-1425 MNGTSSAGTL AVSHDPVKPV TTSPLPAETD ICLFSGSITQ VGSPVGSAMN ENSBTAP00000018986/1-1424 MNGTSSAGTL AVAHDPVKPA ATSPLPAETN ISLFSGSITQ VGSPVGSAMN ENSTTRP00000015273/1-1422 MNGTSSAGTL AVSHDPVKPV TTSPLSAETD ISLFSGSITQ VGSPVGSAMN bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 MNGTSSAGTL AVSHDPVKPV TTSPLSAETD ISLFSGSITQ VGSPVGSAMN 901 950 ENSP00000287727/1-1425 LIPEDGLPPI LISTGVKGDY AVEEKPSQIS VMQQLEDGGP DPLVFVLNAN ENSBTAP00000018986/1-1424 LIPEDGLPPI LISTGVKGDY AVEEKPSQIS VMQQLEDGGP DPLVFVLNAN ENSTTRP00000015273/1-1422 LIPEDGLPPI LISTGVKGDY AVEEKPSQIS VMQQLEDGGP DPLVFVLNAN bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 LIPEDGLPPI LISTGVKGDY AVEEKPSQIS VMQQLEDGSP DPLVFVLNAN 951 1000 ENSP00000287727/1-1425 LLSMVKIVNY VNRKCWCFTT KGMHAVGQSE IVILLQCLPD EKCLPKDIFN ENSBTAP00000018986/1-1424 LLSMVKIVNY VNRKCWCFTT KGMHAVGQSE IVILLQCLPD EKCLPKDIFN ENSTTRP00000015273/1-1422 LLSMVKIVNY VNRKCWCFTT KGMHAVGQSE IVILLQCLPD EKCLPKDIFN bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 LLSMVKIVNY VNRKCWCFTT KGMHAVGQSE IVILLQCLPD EKCLPKDIFN 1001 1050 ENSP00000287727/1-1425 HFVQLYRDAL AGNVVSNLGH SFFSQSFLGS KEHGGFLYVT STYQSLQDLV ENSBTAP00000018986/1-1424 HFVQLYRDAL AGNVVGNLGH SFFSQSFLGS KEHGGFLYVT STYQSLQDLV ENSTTRP00000015273/1-1422 HFVQLYRDAL AGNVVGNLGH SFFSQSFLGS KEHGGFLYVT STYQSLQDLV bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 HFVQLYRDAL AGNVVGNLGH SFFSQSFLGS KEHGGFLYVT STYQSLQDLV 1051 1100 ENSP00000287727/1-1425 LPTPPYLFGI LIQKWETPWA KVFPIRLMLR LGAEYRLYPC PLFSVRFRKP ENSBTAP00000018986/1-1424 LPTPPYLFGI LIQKWETPWA KVFPIRLMLR LGAEYRLYPC PLFSVRFRKP ENSTTRP00000015273/1-1422 LPTPPYLFGI LIQKWETPWA KVFPIRLMLR LGAEYRLYPC PLFSVRFRKP bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 LPTPPYLFGI LIQKWETPWA KVFPIRLMLR LGAEYRLYPC PLFSVRFRKP 1101 1150 ENSP00000287727/1-1425 LFGETGHTIM NLLADFRNYQ YTLPVVQGLV VDMEVRKTSI KIPSNRYNEM ENSBTAP00000018986/1-1424 LFGETGHTIM NLLADFRNYQ YTLPVVQGLV VDMEVRKTSI KIPSNRYNEM ENSTTRP00000015273/1-1422 LFGETGHTIM NLLADFRNYQ YTLPVVQGLV VDMEVRKTSI KIPSNRYNEM bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 LFGETGHTIM NLLADFRNYQ YTLPVVQGLV VDMEVRKTSI KIPSNRYNEM 1151 1200 ENSP00000287727/1-1425 MKAMNKSNEH VLAGGACFNE KADSHLVCVQ NDDGNYQTQA ISIHNQPRKV ENSBTAP00000018986/1-1424 IKAMNKSNEH VLAGGACFNE KADSHLVCVQ NDDGNYQTQA ISIHNQPRKV ENSTTRP00000015273/1-1422 MKAMNKSNEH VLAGGACFNE KADSHLVCVQ NDDGNYQTQA ISIHNQPRKV bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 MKAMNKSNEH VLAGGACFNE KADSHLVCVQ NDDGNYQTQA ISIHNQPRKV 1201 1250 ENSP00000287727/1-1425 TGASFFVFSG ALKSSSGYLA KSSIVEDGVM VQITAENMDS LRQALREMKD ENSBTAP00000018986/1-1424 TGASFFVFSG ALKSSSGYLA KSSIVEDGVM VQITAENMDA LRQALREMKD ENSTTRP00000015273/1-1422 TGASFFVFSG ALKSSSGYLA KSSIVEDGVM VQITAENMDA LRQALREMKD bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 TGASFFVFSG ALKPSSGYLA KSSIVEDGVM VQITAENMDA LRQALREMKD 1251 1300 ENSP00000287727/1-1425 FTITCGKADA EEPQEHIHIQ WVDDDKNVSK GVVSPIDGKS METITNVKIF ENSBTAP00000018986/1-1424 FTITCGKAEA EDPQEQIHIQ WVDDDKDVNK GVLSPIDGKS MESITSVKIF ENSTTRP00000015273/1-1422 FTVTCGKADA EDPQEHIHIQ WVDDDKNVNK GVISPIDGKS MESITSVKIF bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 FTVTCGKADA EDPQEHIHIQ WVDDDKNVNK GVISPIDGKS MESITSVKIF 1301 1350 ENSP00000287727/1-1425 HGSEYKANGK VIRWTEVFFL ENDDQHNCLS DPADHSRLTE HVAKAFCLAL ENSBTAP00000018986/1-1424 HGSEYKANGK VIRWTEVFFL ENDDQHNCLS DPADHSRLTE HVAKAFCLAL ENSTTRP00000015273/1-1422 HGSEYKANGK VIRWTEVFFL ENDDQHSC-S DPADHSRLTE HVAKAFCLAL bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 HGSEYKANGK VIRWTEVFFL ENDDQHSCLS DPADHSRLTE HVAKAFCLAL 1351 1400 ENSP00000287727/1-1425 CPHLKLLKED GMTKLGLRVT LDSDQVGYQA GSNGQPLPSQ YMNDLDSALV ENSBTAP00000018986/1-1424 CPHLKLLKED GMTKLGLRVT LDSDQVGYQA GSNGQPLPSQ YMNDLDSALV ENSTTRP00000015273/1-1422 CPHLKLLKED GMTKLGLRVT LDSDQVGYQA GSNGQPLPSQ YMNDLDSALV bmy_09985T0/1-724 ---------- ---------- ---------- ---------- ---------- BACU000269/1-1403 CPHLKLLKED GMTKLGLRVT LDSDQVGYQA GSNGQPLPSQ YMNDLDSALV 1401 1450 ENSP00000287727/1-1425 PVIHGGACQL SEGPVVMELI FYILENIV ENSBTAP00000018986/1-1424 PVIHGGACQL SEGPIVMELI FYILENIA ENSTTRP00000015273/1-1422 PVIHGGACQL SEGPIVMELI FYILENIA bmy_09985T0/1-724 ---------- ---------- -------- BACU000269/1-1403 PVIHGGACQL SEGPIVMELI FYILENIA