KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:15 2014 Check: 00 .. Name: bmy_06531T0/1-379 Len: 609 Check: 9868 Weight: 1.00 Name: ENSP00000284320/1-608 Len: 609 Check: 7113 Weight: 1.00 Name: ENSBTAP00000019001/1-609 Len: 609 Check: 1920 Weight: 1.00 Name: BACU000040/1-553 Len: 609 Check: 2707 Weight: 1.00 Name: ENSTTRP00000007751/1-609 Len: 609 Check: 1152 Weight: 1.00 // 1 50 bmy_06531T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSP00000284320/1-608 MAASKPVEAA VVAAAVPSSG SGVGGG-GTA GPGTGGLPRW QLALAVGAPL ENSBTAP00000019001/1-609 MAASKPVEAA MVSAAGPGSG SGMGGGSATS GPGTGSLPRW QLALAVGAPL BACU000040/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007751/1-609 MAASKPVEAA VVAAAIPGSG SGVGGGSATA GPGTGGLPRW QLALAVGAPL 51 100 bmy_06531T0/1-379 ---------- ---------- ---------- ---MKQEEGR KE-------- ENSP00000284320/1-608 LLGAGAIYLW SRQQRRREAR GRGDASGLKR NSERKTPEGR ASPAPGSGHP ENSBTAP00000019001/1-609 LLGAGALYLW SRQRRRRETG ARGDSGGLKR NSERKTPEGR ASPAPGSGHP BACU000040/1-553 ------MYLW SRQRRRRDTG GRGDASGLKR NSERKTPEGR ASPAPGSGHP ENSTTRP00000007751/1-609 LLGAGAMYLW SRQRRRRETG GRGDASGLKR NSERKTPEGR ASPAPGSGHP 101 150 bmy_06531T0/1-379 -----QIQKN SLDRAQAAKN KGNKYFKAGK YEQAIQCYTE AISLCPTEKN ENSP00000284320/1-608 EGPGAHLDMN SLDRAQAAKN KGNKYFKAGK YEQAIQCYTE AISLCPTEKN ENSBTAP00000019001/1-609 DGPGTHLEMN SLDRAQAAKN KGNKYFKAGK YEQAIQCYTE AISLCPTEKN BACU000040/1-553 EGPGTHLEMN SLDRAQAAKN KGNKYFKAGK YEQAIQCYTE AISLCPTEKN ENSTTRP00000007751/1-609 EGPGTHLEMN SLDRAQAAKN KGNKYFKAGK YEQAIQCYTE AISLCPTEKN 151 200 bmy_06531T0/1-379 VDLSTFYQNR AAAFEQLQKW KEVAQDCTKA VELNPKYVKA LFRRAKAHEK ENSP00000284320/1-608 VDLSTFYQNR AAAFEQLQKW KEVAQDCTKA VELNPKYVKA LFRRAKAHEK ENSBTAP00000019001/1-609 VDLSTFYQNR AAAFEQLQKW KEVAQDCTKA VELNPKYVKA LFRRAKAHEK BACU000040/1-553 VDLSTFYQNR AAAFEQLQKW KEVAQDCTKA VELNPKYVKA LFRRAKAHEK ENSTTRP00000007751/1-609 VDLSTFYQNR AAAFEQLQKW KEVAQDCTKA VELNPKYVKA LFRRAKAHEK 201 250 bmy_06531T0/1-379 LDNKKECLED VTAVCILEGF QNQQSMLLAD KVLKLLGKEK AKEKYKNREP ENSP00000284320/1-608 LDNKKECLED VTAVCILEGF QNQQSMLLAD KVLKLLGKEK AKEKYKNREP ENSBTAP00000019001/1-609 LDNKKECLED VTAVCILEGF QNQQSMLLAD KVLKLLGKEK AKEKYKNREP BACU000040/1-553 LDNKKECLED VTAVCILEGF QNQQSMLLAD KVLKLLGKEK AKEKYKNREP ENSTTRP00000007751/1-609 LDNKKECLED VTAVCILEGF QNQQSMLLAD KVLKLLGKEK AKEKYKNREP 251 300 bmy_06531T0/1-379 LMPSPQFIKS YFSSFTDDII SQPMLKGEKS DEDKDKEGEA LEVKENSGYL ENSP00000284320/1-608 LMPSPQFIKS YFSSFTDDII SQPMLKGEKS DEDKDKEGEA LEVKENSGYL ENSBTAP00000019001/1-609 LMPSPQFIKS YFSSFTDDII SQPMLKGEKS DEDKDKEGEA LEVKENSGYL BACU000040/1-553 LMPSPQFIKS YFSSFTDDII SQPMLKGEKS DEDKDKEGEA LEVKENSGYL ENSTTRP00000007751/1-609 LMPSPQFIKS YFSSFTDDII SQPMLKGEKS DEDKDKEGEA LEVKENSGYL 301 350 bmy_06531T0/1-379 KAKQYMEEEN YDKIISECSK EIDAQGKYMA EALLLRATFY LLIGNANAAK ENSP00000284320/1-608 KAKQYMEEEN YDKIISECSK EIDAEGKYMA EALLLRATFY LLIGNANAAK ENSBTAP00000019001/1-609 KAKQYMEEEN YDKIISECSK EIDAQGKYMA EALLLRATFY LLIGNANAAK BACU000040/1-553 KAKQYMEEEN YDKIISECSK EIDAQGKYMA EALLLRATFY LLIGNANAAK ENSTTRP00000007751/1-609 KAKQYMEEEN YDKIISECSK EIDAQGKYMA EALLLRATFY LLIGNANAAK 351 400 bmy_06531T0/1-379 PDLDKVISLK EANVK----- ---------- ---------D FNMAADIDPQ ENSP00000284320/1-608 PDLDKVISLK EANVKLRANA LIKRGSMYMQ QQQPLLSTQD FNMAADIDPQ ENSBTAP00000019001/1-609 PDLDKVISLQ EANVKLRANA LIKRGSMYMQ QQQPLLSTQD FNMAADIDPQ BACU000040/1-553 PDLDKVISLK EANVKLRANA LIKRGSMYMQ QQQPLLSTQD FNMAADIDPQ ENSTTRP00000007751/1-609 PDLDKVISLK EANVKLRANA LIKRGSMYMQ QQQPLLSTQD FNMAADIDPQ 401 450 bmy_06531T0/1-379 NADVYHHRGQ LKILLDQVEE AVADFDECIR LRPESALAQA QKCFALYRQA ENSP00000284320/1-608 NADVYHHRGQ LKILLDQVEE AVADFDECIR LRPESALAQA QKCFALYRQA ENSBTAP00000019001/1-609 NADVYHHRGQ LKILLDQVEE AVADFDECIR LRPESALAQA QKCFALYRQA BACU000040/1-553 NADVYHHRGQ LKILLDQVEE AVADFDECIR LRPESALAQA QKCFALYRQA ENSTTRP00000007751/1-609 NADVYHHRGQ LKILLDQVEE AVADFDECIR LRPESALAQA QKCFALYRQA 451 500 bmy_06531T0/1-379 YTGNNSSQIQ AAMKGFEEVI KKFPRCAEGY ALYAQ----- ---------- ENSP00000284320/1-608 YTGNNSSQIQ AAMKGFEEVI KKFPRCAEGY ALYAQALTDQ QQFGKADEMY ENSBTAP00000019001/1-609 YTGNNSSQIQ AAMKGFEEVI KKFPRCAEGY ALYAQALTDQ QQFGKADEMY BACU000040/1-553 YTGNNSSQIQ AAMKGFEDVI KRFPRCAEGY ALYAQALTDQ QQFGKADEMY ENSTTRP00000007751/1-609 YTGNNSSQIQ AAMKGFEEVI KKFPRCAEGY ALYAQALTDQ QQFGKADEMY 501 550 bmy_06531T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSP00000284320/1-608 DKCIDLEPDN ATTYVHKGLL QLQWKQDLDR GLELISKAIE IDNKCDFAYE ENSBTAP00000019001/1-609 DKCINLEPDN ATTYVHKGLL QLQWKQDLDK GLELISKAIE IDNKCDFAYE BACU000040/1-553 DKCINLEPDN ATTYVHKGLL QLQWKQDLDR GLELISKAIE IDNKCDFAYE ENSTTRP00000007751/1-609 DKCINLEPDN ATTYVHKGLL QLQWKQDLDR GLELISKAIE IDNKCDFAYE 551 600 bmy_06531T0/1-379 ---------- ---NCIHILN ASVEIRK--- ---------- ---------- ENSP00000284320/1-608 TMGTIEVQRG NMEKAIDMFN KAINLAKSEM EMAHLYSLCD AAHAQTEVAK ENSBTAP00000019001/1-609 TMGTIEVQRG NMEKAIDMFN KAINLAKSEM EMAHLYSLCD AAHAQTEVAK BACU000040/1-553 TMGTIEVQRG NMEKAIDMFN KAINLAKSEM EMAHLYSLCD AAHAQTEVAK ENSTTRP00000007751/1-609 TMGTIEVQRG NMEKAIDMFN KAINLAKSEM EMAHLYSLCD AAHAQTEVAK 601 650 bmy_06531T0/1-379 --------- ENSP00000284320/1-608 KYGLKPPTL ENSBTAP00000019001/1-609 KYGLKPPTL BACU000040/1-553 KYGLKPPTL ENSTTRP00000007751/1-609 KYGLKPPTL