KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:22 2014 Check: 00 .. Name: ENSP00000351155/1-558 Len: 558 Check: 1491 Weight: 1.00 Name: ENSBTAP00000019032/1-558 Len: 558 Check: 42 Weight: 1.00 Name: ENSTTRP00000009066/1-558 Len: 558 Check: 2735 Weight: 1.00 Name: bmy_06175T0/1-531 Len: 558 Check: 3739 Weight: 1.00 Name: BACU015330/1-505 Len: 558 Check: 731 Weight: 1.00 // 1 50 ENSP00000351155/1-558 MAKNRRDRNS WGGFSEKTYE WSSEEEEPVK KAGPVQVLIV KDDHSFELDE ENSBTAP00000019032/1-558 MAKNRRDRNS WGGFSEKTYE WSSEEEEPVK KAGPVQVLVV KDDHSFELDE ENSTTRP00000009066/1-558 MAKNRRDRNS WGGFSEKGYE WSSEEEEPVK KAGPVQVLIV RDDHSFELDE bmy_06175T0/1-531 MAKNRRDRNS WGGFSEKGYE WSSEEEEPVK KAGPVQVLIV RDDHSFELDE BACU015330/1-505 ---------- ---------- ---------K KAGPVQVLIV RDDHSFELDE 51 100 ENSP00000351155/1-558 TALNRILLSE AVRDKEVVAV SVAGAFRKGK SFLMDFMLRY MYNQESVDWV ENSBTAP00000019032/1-558 TALNRILLSE AVRDKEVVAV SVAGAFRKGK SFLMDFMLRY MYNQESVDWV ENSTTRP00000009066/1-558 TALNRILLSE AIRDKEVVAV SVAGAFRKGK SFLMDFMLRY MYKQESVDWV bmy_06175T0/1-531 TALNRILLSE AIRDKEVVAV SVAGAFRKGK SFLMDFMLRY MYKQESVDWV BACU015330/1-505 TALNRILLSE AIRDKEVVAV SVAGAFRKGK SFLMDFMLRY MYKQESVDWV 101 150 ENSP00000351155/1-558 GDYNEPLTGF SWRGGSERET TGIQIWSEIF LINKPDGKKV AVLLMDTQGT ENSBTAP00000019032/1-558 GDHNEPLTGF SWRGGSERET TGIQIWSEIF LINKPDGKKV AVLLMDTQGT ENSTTRP00000009066/1-558 GDYNEPLTGF SWRGGSERET TGIQIWSEIF LINKPDGKKV AVLLMDTQGT bmy_06175T0/1-531 GDYNEPLTGF SWRGGSERET TGIQIWSEVF LINKPDGKKV AVLLMDTQGT BACU015330/1-505 GDYNEPLTGF SWRGGSERET TGIQIWSEVF LINKPDGKKV AVLLMDTQGT 151 200 ENSP00000351155/1-558 FDSQSTLRDS ATVFALSTMI SSIQVYNLSQ NVQEDDLQHL QLFTEYGRLA ENSBTAP00000019032/1-558 FDSQSTLRDS ATVFALSTMI SSIQVYNLSQ NVQEDDLQHL QLFTEYGRLA ENSTTRP00000009066/1-558 FDSQSTLRDS ATVFALSTMI SSIQVYNLSQ NVQEDDLQHL QLFTEYGRLA bmy_06175T0/1-531 FDSQSTLRDS ATVFALSTMI SSIQVYNLSQ NVQEDDLQHL ---------- BACU015330/1-505 FDSQSTLRDS ATVFALSTMI SSIQVYNLSQ NVQEDDLQHL ---------- 201 250 ENSP00000351155/1-558 MEETFLKPFQ SLIFLVRDWS FPYEFSYGAD GGAKFLEKRL KVSGNQHEEL ENSBTAP00000019032/1-558 MEETFLKPFQ SLIFLVRDWS FPYEFSYGSD GGSKFLEKRL KVSGNQHEEL ENSTTRP00000009066/1-558 MEETFLKPFQ XXXXXXRDWS FPYEFSYGAD GGSKFLEKRL KVSGNQHEEL bmy_06175T0/1-531 ---------Q SLIFLVRDWS FPYEFSYGAD GGSEFLEKRL KVSGNQHEEL BACU015330/1-505 ---------Q SLIFLVRDWS FPYEFSYGAD GGSKFLEKRL KVSGNQHEEL 251 300 ENSP00000351155/1-558 QNVRKHIHSC FTNISCFLLP HPGLKVATNP NFDGKLKEID DEFIKNLKIL ENSBTAP00000019032/1-558 QNVRKHIHSC FTKISCFLLP HPGLKVATNP NFDGKLKEID DEFIKNLKIL ENSTTRP00000009066/1-558 QNVRKHIHSC FTKISCFLLP HPGLKVATNP NFDGKLKEID EEFIKNLKIL bmy_06175T0/1-531 QNVRKHIHSC FTKISCFLLP HPGLKVATNP NFDGKLKEID EEFIKNLKIL BACU015330/1-505 QNVRKHIHSC FTKISCFLLP HPGLKVATNP NFDGKLKEID EEFIKNLKIL 301 350 ENSP00000351155/1-558 IPWLLSPESL DIKEINGNKI TCRGLVEYFK AYIKIYQGEE LPHPKSMLQA ENSBTAP00000019032/1-558 IPWLLSPESL DIKEINGNKI TCRGLVEYFK AYIKIYQGEE LPHPKSMLQA ENSTTRP00000009066/1-558 IPWLLSPESL DIKEINGNKI TCRGLVEYFK AYIKIYQGEE LPHPKSMLQA bmy_06175T0/1-531 IPWLLSPESL DIKEINGNKI TCRGLVEYFK AYIKIYQGEE LPHPKSMLQA BACU015330/1-505 IPWLLSPESL DVKEINGNKI TCRGLVEYFK AYIKIYQGEE LPHPKSMLQA 351 400 ENSP00000351155/1-558 TAEANNLAAV ATAKDTYNKK MEEICGGDKP FLAPNDLQTK HLQLKEESVK ENSBTAP00000019032/1-558 TAEANNLAAV ATAKDTYNKK MEEICGGDKP FLAPNDLQTK HLELKEESVK ENSTTRP00000009066/1-558 TAEANNLAAV ATAKDTYNKK MEEICGGDKP FLAPNDLQTK HLELKEESVK bmy_06175T0/1-531 TAEANNLAAV ATAKDTYHKK MEEICGGDKP FLAPNDLQTR HLELKEESVK BACU015330/1-505 TAEANNLAAV ATAKDTYNKK MEEICGGDKP FLAPNDLQTR HLELKEESVK 401 450 ENSP00000351155/1-558 LFRGVKKMGG EEFSRRYLQQ LESEIDELYI QYIKHNDSKN IFHAARTPAT ENSBTAP00000019032/1-558 LFRGVKKMGG EEFSRRYLQQ LETEIDELYI QYIKHNDSKN IFHAARTPAT ENSTTRP00000009066/1-558 LFRGVKKMGG EEFSRRYLQQ LESEIDELYI QYIKHNDSKN IFHAARTPAT bmy_06175T0/1-531 LFRGVKKMGG EEFSRRYLQQ LESEIDELYI QYIKHNDSKN IFHAARTPAT BACU015330/1-505 LFRGVKKMGG EEFSRRYLQQ LESEIDDLYI QYIKHNDSKN IFHAARTPAT 451 500 ENSP00000351155/1-558 LFVVIFITYV IAGVTGFIGL DIIASLCNMI MGLTLITLCT WAYIRYSGEY ENSBTAP00000019032/1-558 LFVVIFITYV IAGVTGFIGL DIIASLCNMI MGLTLITLCT WAYIRYSGEY ENSTTRP00000009066/1-558 LFVVIFITYV IAGVTGFIGL DIIASLCNMI MGLTLITLCT WAYIRYSGEY bmy_06175T0/1-531 LFVVIFITYV IAGVTGFIGL DIIASLCNMI MGLTLITLCT WAYIRYSGEY BACU015330/1-505 LFVVIFITYV IAGVTGFIGL DIIASLCNMI MGLTLITLCT WAYIRYSGEY 501 550 ENSP00000351155/1-558 RELGAVIDQV AAALWDQGST NEALYKLYSA AATHRHLYHQ AFPTPKSEST ENSBTAP00000019032/1-558 RELGAVIDQV AAALWDQGST NEALYKLYSA AATHRHLYHQ AFPAPKSEST ENSTTRP00000009066/1-558 RELGAVIDQV AAALWDQGPS LQALYKLYSA AATHRHLYHP AFPAPKSEST bmy_06175T0/1-531 RELGAVIDQ- -------GST NEALYKLYSA AATHRHLYHQ AFPAPKSEST BACU015330/1-505 RELGAVIDQV AAALWDQ--- --ALYKLYSA AATHRHLYHQ AFPAPKSEST 551 600 ENSP00000351155/1-558 EQSEKKKM ENSBTAP00000019032/1-558 EQSEKKKM ENSTTRP00000009066/1-558 EQSEKKKI bmy_06175T0/1-531 EQSEKKKI BACU015330/1-505 EQSEKKKI