KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:23 2014 Check: 00 .. Name: BACU000438/1-693 Len: 721 Check: 3714 Weight: 1.00 Name: ENSTTRP00000014029/1-550 Len: 721 Check: 6773 Weight: 1.00 Name: ENSP00000376587/1-549 Len: 721 Check: 2661 Weight: 1.00 Name: bmy_17263T0/1-291 Len: 721 Check: 8568 Weight: 1.00 Name: ENSBTAP00000019041/1-550 Len: 721 Check: 5327 Weight: 1.00 // 1 50 BACU000438/1-693 ---------- ---------- --------MK SXXXXXXXXX XXVGGEGDKE ENSTTRP00000014029/1-550 MSPTISHKDS SRQRRPGTFN HSLDMKSGPL PPGAWDDNYP ELVDGEGDQE ENSP00000376587/1-549 MSPTISHKDS SRQRRPGNFS HSLDMKSGPL PPGGWDDSHL DSAGREGDRE bmy_17263T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019041/1-550 MSPTVSHKDS SRQRRPGTFN HSLDLKSGPL PPGSWDDNLP EVVGGEGDKE 51 100 BACU000438/1-693 ALLRDIGASD FSKPPRSCRA ELSSILLLLF LYVLQGIPLG LAGSIPLILQ ENSTTRP00000014029/1-550 AFLRDIGASY FSKPPRSCRA ELSSILLLLF LYVLQGIPLG LAGSIPLILQ ENSP00000376587/1-549 ALLGDTGTGD FLKAPQSFRA ELSSILLLLF LYVLQGIPLG LAGSIPLILQ bmy_17263T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019041/1-550 ALLRDISTVD FSKTPRSCRA ELSSILLLLF LYVLQGIPLG LAGSIPLILQ 101 150 BACU000438/1-693 SKNVSYTDQA FFSFVFWPFS LKLLWAPLVD AVYFRNFGRR KSWLVPTQYI ENSTTRP00000014029/1-550 SKNVSYTDQA FFSFVFWPFS LKLLWAPLVD AVYFRNFGRR KSWLVPTQYI ENSP00000376587/1-549 SKNVSYTDQA FFSFVFWPFS LKLLWAPLVD AVYVKNFGRR KSWLVPTQYI bmy_17263T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019041/1-550 SKNVSYTDQA FFSFVFWPFS LKLLWAPLVD AVYFKNFGRR KSWLVPTQYI 151 200 BACU000438/1-693 LGLFMIYLST QVDHLLGNTD GRTPDVVALT VTFFLFEFLA ATQDIAVDGW ENSTTRP00000014029/1-550 LGLFMIYLST QVDHLLGNTD GRTPDVVALT VTFFLFEFLA ATQDIAVDGW ENSP00000376587/1-549 LGLFMIYLST QVDRLLGNTD DRTPDVIALT VAFFLFEFLA ATQDIAVDGW bmy_17263T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019041/1-550 LGFFMIYLST QVDHLLGNTD GRTPDVVALT VTFFLFEFLA ATQDIAVDGW 201 250 BACU000438/1-693 ALTMLSRENV GYASTCNSVG QTAGYFLGNV LFLALESADF CNKYLRFQPQ ENSTTRP00000014029/1-550 ALTMLSRENV GYASTCNSVG QTAGYFLGNV LFLALESADF CNKYLRFQPQ ENSP00000376587/1-549 ALTMLSRENV GYASTCNSVG QTAGYFLGNV LFLALESADF CNKYLRFQPQ bmy_17263T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019041/1-550 ALTMLSRENV GYASTCNSVG QTAGYFLGNV LFLALESADF CNKYLRFEPQ 251 300 BACU000438/1-693 PRGIVTLSDF LFFWGTVFLI TTTLVALLKK EHKEVSVGKE ETQGITDTYK ENSTTRP00000014029/1-550 PRGIVTLSDF LFFWGTVFLI TTTLVALLKK ENKEVSVGKE ETQGITDTYK ENSP00000376587/1-549 PRGIVTLSDF LFFWGTVFLI TTTLVALLKK EN-EVSVVKE ETQGITDTYK bmy_17263T0/1-291 ---------F LFFWGTVFLI TTTLVALLKK EHKEVSVGKE ETQGITDTYK ENSBTAP00000019041/1-550 PRGIVTLSDF LFFWGTVFLI TTTLVALLKK ENKEVSVGKE ETQGITDTYK 301 350 BACU000438/1-693 LLFAIIKMPA VLTFCLLILT AKIGFSAADA VTGLKLVEEG VPKEHLALLA ENSTTRP00000014029/1-550 LLFAIIKMPA VLTFCLLILT AKIGFSAADA VTGLKLVEEG VPKEHLALLA ENSP00000376587/1-549 LLFAIIKMPA VLTFCLLILT AKIGFSAADA VTGLKLVEEG VPKEHLALLA bmy_17263T0/1-291 LLFAIIKMPA VLTFCLLILT AKIGFSAADA VTGLKLVEEG VPKEHLALLA ENSBTAP00000019041/1-550 LLFAIVKMPA VLTFCLLILT AKIGFSAADA VTGLKLVEEG VPKEHLALLA 351 400 BACU000438/1-693 VPMVPLQIIL PLIISKYTAG PQPLNIFYKA MPYRLLLGLE YALLVWWTPK ENSTTRP00000014029/1-550 VPMVPLQIIL PLIISKYTTG PQPLNIFYKA MPYRLLLGLE YALLVWWTPK ENSP00000376587/1-549 VPMVPLQIIL PLIISKYTAG PQPLNTFYKA MPYRLLLGLE YALLVWWTPK bmy_17263T0/1-291 VPMVPLQIIL PLIISKYTAG PQPLNIFYKA MPYRLLLGLE YALLVWWTPK ENSBTAP00000019041/1-550 VPMVPLQIIL PLIISRYTAG PQPLNIFYKA MPYRLLFGLE YALLVWWTPK 401 450 BACU000438/1-693 VEHQGGFPIY YYIIVLLSYA LHQVTLYSMY VSIMAFNAKN ISTVMAIAGV ENSTTRP00000014029/1-550 VEHQGGFPIY YYIIVLLSYA LHQXXXXXXX XXXXXXXXX- XXXXXXXXXX ENSP00000376587/1-549 VEHQGGFPIY YYIVVLLSYA LHQVTVYSMY VSIMAFNAK- VSDPLIGGTY bmy_17263T0/1-291 VEHQGGFPIY YYIIVLLSYA LHQVTLYSMY VSVMAFNAK- VSDPLIGGTY ENSBTAP00000019041/1-550 VEHQGGFPIY YYIVVLLSYA LHQVTLYSMY VSIMAFNAK- VSDPLIGGTY 451 500 BACU000438/1-693 MLLLRSVRLI MPSVSQKCCT ELLAVEGLLD SSHHETSKFT SSSDIPVEFI ENSTTRP00000014029/1-550 XXXXXXXXXX XXXXXXXXX- -XXXXXXXXX XXXXXXXXXX XXXXXXXXLC ENSP00000376587/1-549 MTLLNTVSNL GGNWPSTVA- -LWLVDPLTV KECVGASNQN CRTPDAVELC bmy_17263T0/1-291 MTLLNTVSNL GGNWPSTVA- -LWLVDPLTV KECVGASNQN CQTHDAVELC ENSBTAP00000019041/1-550 MTLLNTVSNL GGNWPSTVA- -LWLVDPLTV KECVGASNQN CRTPDAVELC 501 550 BACU000438/1-693 RRNVKLRGRL HRITENGFEI EHIPITLPIL SSWRKEPCGA LLVKLAGVEL ENSTTRP00000014029/1-550 KKL----GGS CVTALDGYYV ESI-ICVFIG FGW------- ---------- ENSP00000376587/1-549 KKL----GGS CVTALDGYYV ESI-ICVFIG FGW------- ---------- bmy_17263T0/1-291 KKL----GGS CVTALDGYYV ESV-ICVFIG FGW------- ---------- ENSBTAP00000019041/1-550 KKL----GGS CVTALDGYYV ESV-ICVLIG FGW------- ---------- 551 600 BACU000438/1-693 TETGKVWLQK ELKPSQVVWF QLLGKENSAL FCYLLVNKGR YFSVSLNEEI ENSTTRP00000014029/1-550 ---------- --------WF -CLGPK---- ---------- ---------- ENSP00000376587/1-549 ---------- --------WF -FLGPK---- ---------- ---------- bmy_17263T0/1-291 ---------- --------WF -FLGPK---- ---------- ---------- ENSBTAP00000019041/1-550 ---------- --------WF -FLGPK---- ---------- ---------- 601 650 BACU000438/1-693 LRRGLGKTVL VKGLNYDSKI YWRIHRNLLK AELIALKKGE GIWKEESEKE ENSTTRP00000014029/1-550 ---------- LKKLQDEGPS SWKCKRSK-- ---------- ---------- ENSP00000376587/1-549 ---------- FKKLQDEGSS SWKCKRNN-- ---------- ---------- bmy_17263T0/1-291 ---------- LKKLQDEGPS SWKCKRSK-- ---------- ---------- ENSBTAP00000019041/1-550 ---------- LKKLQDEGPS SWKCKRDK-- ---------- ---------- 651 700 BACU000438/1-693 SYLEKFKGSW REIWKKDSYF KKIGSDFNLK KESYYDKFRG TYETWKENMN ENSTTRP00000014029/1-550 ---------- ---------- ---------- ---------- ---------- ENSP00000376587/1-549 ---------- ---------- ---------- ---------- ---------- bmy_17263T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019041/1-550 ---------- ---------- ---------- ---------- ---------- 701 750 BACU000438/1-693 NYSLILKFRE LLSRVHFRRK G ENSTTRP00000014029/1-550 ---------- ---------- - ENSP00000376587/1-549 ---------- ---------- - bmy_17263T0/1-291 ---------- ---------- - ENSBTAP00000019041/1-550 ---------- ---------- -