KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:06:24 2014  Check: 00 ..

 Name: bmy_02122T0/1-166         Len:    204  Check:  7707  Weight:  1.00
 Name: ENSP00000350704/1-203     Len:    204  Check:  9929  Weight:  1.00
 Name: ENSTTRP00000008158/1-194  Len:    204  Check:  9017  Weight:  1.00
 Name: ENSBTAP00000019047/1-203  Len:    204  Check:  1187  Weight:  1.00

//


                          1                                                   50
bmy_02122T0/1-166         MTQDQPLLAV QEALRKCFPV VEEQQGLWQS ALRDCPPLLA SLSNLAEQLQ 
ENSP00000350704/1-203     MTQDRPLLAV QEALKKCFPV VEEQQGLWQS ALRDCQPLLS SLSNLAEQLQ 
ENSTTRP00000008158/1-194  MTQDQPLLAV QEALRKCFPV VEEQQGLWQS ALTDCPPLLA SLSNLVEQL- 
ENSBTAP00000019047/1-203  MTEDQPLLAV QEALRKCFPV VDEQQGLWQS ALRDCPPLLV SLSNLAEQLQ 


                          51                                                 100
bmy_02122T0/1-166         AAQNLRFEDV PSLRAFPDLQ ERLRRKQLAA GDTLLDRLEE RL-------K 
ENSP00000350704/1-203     AAQNLRFEDV PALRAFPDLK ERLRRKQLVA GDIVLDKLGE RLAILLKVRD 
ENSTTRP00000008158/1-194  AAQNLRFEDV PSLRA-PDLQ ERLRKQ---A ADLQLGELAA LL----KVRD 
ENSBTAP00000019047/1-203  AAQNLRFEDV PSLRPFPDLQ ERLRRKQLAA GDTILDKLGE RLATLLKVRD 


                          101                                                150
bmy_02122T0/1-166         VPEEEVPSVL NPVGRLGKHP SFAQSLGPNF GRRTPRPCTR Y--PVECFLL 
ENSP00000350704/1-203     MVSSHVERVF QIYEQHADTV GIDAVLQPSA VSPSVADMLE WLQDIERHYR 
ENSTTRP00000008158/1-194  VVSSHVEHVL QVYEQHADMI SLDAVLQASA ASPSVAEMLE WLQDIERHYR 
ENSBTAP00000019047/1-203  VVSSHVERVL QIYEQHADTI GLDAVLQASA ASPSVAEMLE WLQDIERHYR 


                          151                                                200
bmy_02122T0/1-166         PGRVKKPCVY RETRGTQLKT DIAAL----- ---------- ---------- 
ENSP00000350704/1-203     KSYLKRKYLL SSIQWGDL-A NIQALPKAWD RISKDEHQDL VQDILLNVSF 
ENSTTRP00000008158/1-194  SLYLKRKYLL SSIQWGDL-G NIQALPKAWD RISEDEHPDL VRDILLNVSF 
ENSBTAP00000019047/1-203  NSYLKRKYLL SSIQWEDL-G NIQALPRAWD RISEDEYPDL VQDVMLNVSF 


                          201                                                250
bmy_02122T0/1-166         ---- 
ENSP00000350704/1-203     FLEE 
ENSTTRP00000008158/1-194  FLEE 
ENSBTAP00000019047/1-203  FLEE