KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:24 2014 Check: 00 .. Name: ENSP00000362146/1-280 Len: 285 Check: 7742 Weight: 1.00 Name: ENSBTAP00000019049/1-280 Len: 285 Check: 9521 Weight: 1.00 Name: bmy_02121T0/1-284 Len: 285 Check: 8674 Weight: 1.00 Name: BACU009688/1-280 Len: 285 Check: 496 Weight: 1.00 Name: ENSTTRP00000008159/1-204 Len: 285 Check: 3719 Weight: 1.00 // 1 50 ENSP00000362146/1-280 MAP-RKGSSR VAKTNSLRRR KLASFLKDFD REVEIRIKQI ESDRQNLLKE ENSBTAP00000019049/1-280 MAPSRKGGSR VAKTNALRNR KLASFLKDFD REVQMRSKQI QSDRQNLLKE bmy_02121T0/1-284 MAPARKGGSR VAKNNSVRSR KLASFLKDFD REVQIRSKQI QSDRQNLLKE BACU009688/1-280 MAPARKGGSR VAKNNSVRSR KLASFLKDFD REVQIRSKQI QSDRQNLLKE ENSTTRP00000008159/1-204 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362146/1-280 VDNLYNIEIL RLPKALREMN WLDYFALGGN KQALEEAATA DLDITEINKL ENSBTAP00000019049/1-280 LDNLYNIEIL RLPKALREMN WLEYFALGGN KRALEEAATA DLDITEINKL bmy_02121T0/1-284 MDNLYNIEIL RLPKALREMN WLDYFALGGN KRALEEAATA DLDITEINKL BACU009688/1-280 MDNLYNIEIL RLPKALREMN WLDYFALGGN KRALEEAATA DLDITEINKL ENSTTRP00000008159/1-204 ---------- ---------- ------LGGN KRALEEAATA DLDITEINKL 101 150 ENSP00000362146/1-280 TAEAIQTPLK SAKTRKVIQV DEMIVEEEEE EENERKNLQT ARVKRCPPSK ENSBTAP00000019049/1-280 TAEATRTPLK LAKTRKVMQV DEMIV-EEEE EENNSKNPQT ARAKRCPPSK bmy_02121T0/1-284 TAEAVQTPLK SAKTRKVMQV DDMIM-EEEE EENKNKNLQT ARVKRCPPSK BACU009688/1-280 TAEAVQTPLK SAKTRKVMQV DDMIM-EEEE EENKNKNLRT ARVKRCPPSK ENSTTRP00000008159/1-204 TAEAVQTPLK SAKTRKVMQV DDMIM-EEEE EENKNKNPQT ARVKRCPPSK 151 200 ENSP00000362146/1-280 KRTQSIQGKG KGKRSSRANT VTPAVGRLEV SMVKPTPGLT PRFDSRVFKT ENSBTAP00000019049/1-280 KRTQSIQGKG KNKRSSHYAT VTPAVGRLEL SLVKPTPGLT PRFDSRIFKT bmy_02121T0/1-284 KRTRSIQGKG KSKRSSHCAT VTPAVGRLEL SMVKPTPGLT PRFDSRVFKT BACU009688/1-280 KRTRSIQGKG KSKRSSHCAT VTPAVGRLEL SMVKPTPGLT PRFDSRVFKT ENSTTRP00000008159/1-204 KRTQSIQGKG KSKRSNHCAT VTPAVGRLEL SMVKPTPGLT PRFDSRVFKT 201 250 ENSP00000362146/1-280 PGLRTPAAGE RIYNISGNGS PLADSKEIFL TVPVGGGESL RLLASDLQRH ENSBTAP00000019049/1-280 PGLRTPAARE RIYNVSVNGS PLADSKEIFL TVPVGGGESM RLLASDLQRI bmy_02121T0/1-284 PGLRTPAARE RIYNVSVNGS PLADSKEIFL TVPVGGGESM RLLASDLQRI BACU009688/1-280 PGLRTPAARE RIYNVSVNGS PLADSKEIFL TVPVGGGESM RFLASDLQRT ENSTTRP00000008159/1-204 PGLRTPAARE RIYNVSVNGS PLADSKEIFL TVPVGGGESM RLLASDLQRI 251 300 ENSP00000362146/1-280 SIAQLDPEAL GNIKKLSNRL AQICSSIRTH K---- ENSBTAP00000019049/1-280 DIAQLDPEAL GNIKKLSNRL AQICGTIRTQ K---- bmy_02121T0/1-284 DIAQLDPEAL GSIKKLSVSL GFLSTHRRPP VAFWV BACU009688/1-280 DIAQLDPEAL GSIKKLSSRL AQICSSIRTH K---- ENSTTRP00000008159/1-204 DIAQLDPEAL GNIKKLSSRL AQICSSIRTH K----