KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:06:31 2014 Check: 00 .. Name: ENSP00000294485/1-349 Len: 378 Check: 2569 Weight: 1.00 Name: bmy_20731T0/1-230 Len: 378 Check: 4483 Weight: 1.00 Name: ENSTTRP00000009560/1-199 Len: 378 Check: 7987 Weight: 1.00 Name: ENSBTAP00000019092/1-337 Len: 378 Check: 4395 Weight: 1.00 // 1 50 ENSP00000294485/1-349 MAGPAIHTAP MLFLVLLLPL ELSLAGALAP GTPARNLPEN HIDLPGPALW bmy_20731T0/1-230 MAGPTTHVAP MLFLVLLLLL ELSLAVSLGP GSSARNLPEN HIDLPGPALW ENSTTRP00000009560/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019092/1-337 ---------- MLLLALLLLL ELSLAGSLGP GSSAQNLPEN HIDLSGPALW 51 100 ENSP00000294485/1-349 TPQASHHRRR GPGKKEWGPG LPSQAQDGAV VTATRQASRL PEAEGLLPEQ bmy_20731T0/1-230 TPQTSHHRRQ GLGKKERGPG TPGRAQDGAV VATTRQASRL PGAGGLLPGQ ENSTTRP00000009560/1-199 ------RDRT G--------- ---------- ---------- ---------- ENSBTAP00000019092/1-337 TPQASHHRRR GLGKKERGPG TPGWTQDGAV VTATRQASRL PGAEGLLHGS 101 150 ENSP00000294485/1-349 SPAGLLQDKD LLLGLALPYP EKENRPPGWE RTRKRSREHK RRRDRLRLHQ bmy_20731T0/1-230 SPAGLLQDKD LLLGLTLPYP EKQSRSPGSE RVKKRGREHK RRKERLKLHR ENSTTRP00000009560/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019092/1-337 SPAGLLQDKG LLRGLTRPYP EKETQAPGSE RVKKRGREHK RRKERLRLHR 151 200 ENSP00000294485/1-349 ---------- ---------- ---------G RALVRGPSSL MKKAELSEAQ bmy_20731T0/1-230 AGNVGPAVDR YGVVGGKQIT LLCFLLLVSG RALVRGPSSL MKKVELSEDQ ENSTTRP00000009560/1-199 ---------- ---------- ---------G RALVRGPSSL MKKVELSEDQ ENSBTAP00000019092/1-337 ---------- ---------- ---------G RALVRGPSSL MKKAELSEDQ 201 250 ENSP00000294485/1-349 VLDAAMEESS TSLAPTMFFL TTFEAAPATE ESLILPVTSL RPQQAQPRSD bmy_20731T0/1-230 APDAXMEESS TSLAPTILYL TTFKAAPATE ---------- ---------- ENSTTRP00000009560/1-199 GPDAAMEESS TSLAPTILYL TTFKAAPATE ESLILPVTSL WPQQAHPRPD ENSBTAP00000019092/1-337 SPDALMEESS TSLAPTILYL TTFEA-PATE ESLILPVTSL WP-QAHPRPD 251 300 ENSP00000294485/1-349 GEVMPTLDMA LFDWTDYEDL KPDGWPSAKK KEKHRGKLSS DGNETSPAEG bmy_20731T0/1-230 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009560/1-199 GEVMPTLDMA LFDWTDYEDL KPEVWPSTKK KEKHRG-LSS DGNETSPAEG ENSBTAP00000019092/1-337 GEVMPTLDMA LFDWTDYEDL KPEVWPSTRK KEKHRGKLSS DGNETSPAKG 301 350 ENSP00000294485/1-349 EPCDHHQDCL PGTCCDLREH LCTPHNRGLN NKCFDDCMCV EGLRCYAKFH bmy_20731T0/1-230 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009560/1-199 L---GHPQCL P-TCCDLREH LCTPHNRGLN NKCFDDCMCV EGLRCYVKFH ENSBTAP00000019092/1-337 EPCDHHQDCL PGTCCDLREH LCTPHNRGLN NKCFDDCMCV EGLRCYAKFH 351 400 ENSP00000294485/1-349 RNRRVTRRKG RCVEPETANG DQGSFINV bmy_20731T0/1-230 ---------- ---------- -------- ENSTTRP00000009560/1-199 RNRRVTRRKG RCVEPETADG DQGSFINV ENSBTAP00000019092/1-337 RNRRVTRRKG RCVEPETANG DQGSFINV