KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:31 2014 Check: 00 .. Name: bmy_16542T0/1-383 Len: 520 Check: 70 Weight: 1.00 Name: BACU005412/1-520 Len: 520 Check: 1583 Weight: 1.00 Name: ENSTTRP00000011838/1-503 Len: 520 Check: 9509 Weight: 1.00 Name: ENSP00000227524/1-504 Len: 520 Check: 5059 Weight: 1.00 Name: ENSBTAP00000019100/1-504 Len: 520 Check: 5109 Weight: 1.00 // 1 50 bmy_16542T0/1-383 ---------M SLICS----- --ISNEVPEH PCVSPVSNHV YERRLIEKYI BACU005412/1-520 MNHDVAGGAA DLVPSAGSDF PIVSNEVPEH PCVSPVSNHV YERRLIEKYI ENSTTRP00000011838/1-503 ---------M SLICS----- --ISNEVPEH PCVSPVSNHV YERRLIEKYI ENSP00000227524/1-504 ---------M SLICS----- --ISNEVPEH PCVSPVSNHV YERRLIEKYI ENSBTAP00000019100/1-504 ---------M SLICS----- --ISNEVPEH PCVSPVSNHV YERRLIEKYI 51 100 bmy_16542T0/1-383 AENGTDPINN QPLSEEQLID IKVAHPIRPK PPSATSIPAI LKALQDEWDA BACU005412/1-520 AENGTDPINN QPLSEEQLID IKVAHPIRPK PPSATSIPAI LKALQDEWDA ENSTTRP00000011838/1-503 AENGTDPINN QPLSEEQLID IKVAHPIRPK PPSATSIPAI LKALQDEWDA ENSP00000227524/1-504 AENGTDPINN QPLSEEQLID IKVAHPIRPK PPSATSIPAI LKALQDEWDA ENSBTAP00000019100/1-504 AENGTDPINN QPLSEEQLID IKVAHPIRPK PPSATSIPAI LKALQDEWDA 101 150 bmy_16542T0/1-383 VMLHSFTLRQ QLQTTRQELS HALYQHDAAC RVIARLTKEV TAAREALATL BACU005412/1-520 VMLHSFTLRQ QLQTTRQELS HALYQHDAAC RVIARLTKEV TAAREALATL ENSTTRP00000011838/1-503 VMLHSFTLRQ QLQTTRQELS HALYQHDAAC RVIARLTKEV TAAREALATL ENSP00000227524/1-504 VMLHSFTLRQ QLQTTRQELS HALYQHDAAC RVIARLTKEV TAAREALATL ENSBTAP00000019100/1-504 VMLHSFTLRQ QLQTTRQELS HALYQHDAAC RVIARLTKEV TAAREALATL 151 200 bmy_16542T0/1-383 KPQAGLIVPQ AVPSSQPSVV GAGEPMDLGE LVGMTPEIIQ KLQDKATVLT BACU005412/1-520 KPQAGLIVPQ AVPSSQPSVV GAGEPMDLGE LVGMTPEIIQ KLQDKATVLT ENSTTRP00000011838/1-503 KPQAGLIVPQ AVPSSQPSVV GAGELMDLGE LVGMTPEIIQ -LQDKATVLT ENSP00000227524/1-504 KPQAGLIVPQ AVPSSQPSVV GAGEPMDLGE LVGMTPEIIQ KLQDKATVLT ENSBTAP00000019100/1-504 KPQAGLIVPQ AVPSSQPSVV GAGEPMDLGE LVGMTPEIIQ KLQDKATVLT 201 250 bmy_16542T0/1-383 TERKKRGKTV PEELVKPEEL SKYRQVASHV GLHSASIPGI LALDLCPSDT BACU005412/1-520 TERKKRGKTV PEELVKPEEL SKYRQVASHV GLHSASIPGI LALDLCPSDT ENSTTRP00000011838/1-503 TERKKRGKTV PEELVKPEEL SKYRQVASHV GLHSASIPGI LALDLCPSDT ENSP00000227524/1-504 TERKKRGKTV PEELVKPEEL SKYRQVASHV GLHSASIPGI LALDLCPSDT ENSBTAP00000019100/1-504 TERKKRGKTV PEELVKPEEL SKYRQVASHV GLHSASIPGI LALDLCPSDT 251 300 bmy_16542T0/1-383 NKILTGGADK NVVVFDKSSE QILATLKGHT KKVTSVVFHP SQELVFSASP BACU005412/1-520 NKILTGGADK NVVVFDKSSE QILATLKGHT KKVTSVVFHP SQELVFSASP ENSTTRP00000011838/1-503 NKILTGGADK NVVVFDKSSE QILATLKGHT KKVTSVVFHP SQELVFSASP ENSP00000227524/1-504 NKILTGGADK NVVVFDKSSE QILATLKGHT KKVTSVVFHP SQDLVFSASP ENSBTAP00000019100/1-504 NKILTGGADK NVVVFDKSSE QILATLKGHT KKVTSVVFHP SQELVFSASP 301 350 bmy_16542T0/1-383 DATIRIWSVP NASCVQVVRA HESAVTGLSL HATGDYLLSS SDDQYWAFSD BACU005412/1-520 DATIRIWSVP NASCVQVVRA HESAVTGLSL HATGDYLLSS SDDQYWAFSD ENSTTRP00000011838/1-503 DATIRIWSVP NASCVQVVRA HESAVTGLSL HATGDYLLSS SDDQYWAFSD ENSP00000227524/1-504 DATIRIWSVP NASCVQVVRA HESAVTGLSL HATGDYLLSS SDDQYWAFSD ENSBTAP00000019100/1-504 DATIRIWSVP NASCVQVVRA HESAVTGLSL HATGDYLLSS SDDQYWAFSD 351 400 bmy_16542T0/1-383 IQTGRVLTKV TDETSGC--- ---------- ---------- ---------- BACU005412/1-520 IQTGRVLTKV TDETSGCSLT CAQFHPDGLI FGTGTMDSQI KIWDLKERTN ENSTTRP00000011838/1-503 IQTGRVLTKV TDETSGCSLT CAQFHPDGLI FGTGTMDSQI KIWDLKERTN ENSP00000227524/1-504 IQTGRVLTKV TDETSGCSLT CAQFHPDGLI FGTGTMDSQI KIWDLKERTN ENSBTAP00000019100/1-504 IQTGRVLTKV TDETSGCSLT CAQFHPDGLI FGTGTMDSQI KIWDLKERTN 401 450 bmy_16542T0/1-383 -CKLPRKR-- ---------- ---------- ----WALHLL R--------- BACU005412/1-520 VANFPGHSGP ITSIAFSENG YYLATAADDS SVKLWDLRKL KNFKTLQLDN ENSTTRP00000011838/1-503 VANFPGHSGP ITSIAFSENG YYLATAADDS SVKLWDLRKL KNFKTLQLDN ENSP00000227524/1-504 VANFPGHSGP ITSIAFSENG YYLATAADDS SVKLWDLRKL KNFKTLQLDN ENSBTAP00000019100/1-504 VANFPGHSGP ITSIAFSENG YYLATAADDS SVKLWDLRKL KNFKTLQLDN 451 500 bmy_16542T0/1-383 -FVYFSVLFS ---------- ---HLLICSK NT-------- ---------- BACU005412/1-520 NFEVKSLIFD QSGTYLALGG TDVQIYICKQ WTEILHFTEH SGLTTGVAFG ENSTTRP00000011838/1-503 NFEVKSLIFD QSGTYLALGG TDVQIYICKQ WTEILHFTEH SGLTTGVAFG ENSP00000227524/1-504 NFEVKSLIFD QSGTYLALGG TDVQIYICKQ WTEILHFTEH SGLTTGVAFG ENSBTAP00000019100/1-504 NFEVKSLIFD QSGTYLALGG TDVQIYICKQ WTEILHFTEH SGLTTGVAFG 501 550 bmy_16542T0/1-383 ---------- ---------- BACU005412/1-520 HHAKFIASTG MDRSLKFYSL ENSTTRP00000011838/1-503 HHAKFIASTG MDRSLKFYSL ENSP00000227524/1-504 HHAKFIASTG MDRSLKFYSL ENSBTAP00000019100/1-504 HHAKFIASTG MDRSLKFYSL