KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:32 2014 Check: 00 .. Name: ENSBTAP00000019108/1-769 Len: 778 Check: 157 Weight: 1.00 Name: ENSP00000035307/1-772 Len: 778 Check: 7007 Weight: 1.00 Name: bmy_12911T0/1-778 Len: 778 Check: 5954 Weight: 1.00 Name: BACU000722/1-778 Len: 778 Check: 6389 Weight: 1.00 Name: ENSTTRP00000000821/1-772 Len: 778 Check: 8226 Weight: 1.00 // 1 50 ENSBTAP00000019108/1-769 ------MRLS SVLALLRPAL PLILGLSLGC SLSLLRVSWI QGEGDDPCVE ENSP00000035307/1-772 ------MRLS SLLALLRPAL PLILGLSLGC SLSLLRVSWI QGEGEDPCVE bmy_12911T0/1-778 MAGPTAMRLS SVLALLRPAL PLILGLSLGC SLSLLRVSWI QGEGEDPCVV BACU000722/1-778 MAGPTAMRLS SVLALLRPAL PLILGLSLGC SLSLLRVSWI QGEGEDPCVV ENSTTRP00000000821/1-772 ------MRLS SVLALLQPAL PLILGLSLGC SLSLLRVSWI QGEGEDPCVV 51 100 ENSBTAP00000019108/1-769 AVGKAGGPQS LDSRTQLDQS DEDFKPRIVP YYRDPNKPYK KVLRTRYIQT ENSP00000035307/1-772 AVGERGGPQN PDSRARLDQS DEDFKPRIVP YYRDPNKPYK KVLRTRYIQT bmy_12911T0/1-778 AVGEPGGPQN LDSGTQLDQS DEDFKPRIVP YDRDPNKPYK KVLRTRYIQT BACU000722/1-778 AVGEPGGPQN LDSGTQLDQS DEDFKPRIVP YYRDPNKPYK KVLRTRYIQT ENSTTRP00000000821/1-772 AVGEPGGPQN LDSGAQLDQS DEDFKPRIVP YYRDPNKPYK KVLRTRYIQT 101 150 ENSBTAP00000019108/1-769 ELGSRERLLV AVLTSRATLS TLAVAVNRTV AHHFPRLLYF TGQRGARTPA ENSP00000035307/1-772 ELGSRERLLV AVLTSRATLS TLAVAVNRTV AHHFPRLLYF TGQRGARAPA bmy_12911T0/1-778 ELGSRERLLV AVLTSRATLS TLAVAVNRTV AHHFPRLLYF TGQRGARTPA BACU000722/1-778 ELGSRERLLV AVLTSRATLS TLAVAVNRTV AHHFPRLLYF TGQRGARTPA ENSTTRP00000000821/1-772 ELGSRERLLV AVLTSRATLS TLAVAVNRTV AHHFPRLLYF TGQRGARTPA 151 200 ENSBTAP00000019108/1-769 GMQVVSHGDE RPAWLMSETL RHLHTHFGAD YDWFFIMQDD TYVQAPRLAA ENSP00000035307/1-772 GMQVVSHGDE RPAWLMSETL RHLHTHFGAD YDWFFIMQDD TYVQAPRLAA bmy_12911T0/1-778 GMQVVSHGDE RPAWLMSETL RHLHTHFGAD YDWFFVMQDD TYVQAPRLAA BACU000722/1-778 GMQVVSHGDE RPAWLMSETL RHLHTHFGAD YDWFFVMQDD TYVQAPRLAA ENSTTRP00000000821/1-772 GMQVVSHGDE RPAWLMSETL RHLHTHFGAD YDWFFVMQDD TYVQAPRLAA 201 250 ENSBTAP00000019108/1-769 LAGHLSINQD LYLGRAEEFI GAGEQARYCH GGFGYLLSRS LLLRLRPHLD ENSP00000035307/1-772 LAGHLSINQD LYLGRAEEFI GAGEQARYCH GGFGYLLSRS LLLRLRPHLD bmy_12911T0/1-778 LAGHLSINQD LYLGRTEEFI GAGEQARYCH GGFGYLLSRS LLLRLWPHLD BACU000722/1-778 LAGHLSINQD LYLGRTEEFI GAGEQARYCH GGFGYLLSRS LLLRLWPHLD ENSTTRP00000000821/1-772 LAGHLSINQD LYLGRTEEFI GAGEQARYCH GGFGYLLSRS LLLRLWPHLD 251 300 ENSBTAP00000019108/1-769 GCRGDILSAR PDEWLGRCLI DSLGIGCVSQ HQGQRYRSFE LAKNRDPETE ENSP00000035307/1-772 GCRGDILSAR PDEWLGRCLI DSLGVGCVSQ HQGQQYRSFE LAKNRDPEKE bmy_12911T0/1-778 GCRGDILSAR PDEWLGRCLI DSLGIGCVSQ HQGQQYRSFE LAKNRDPEKE BACU000722/1-778 GCRGDILSAR PDEWLGRCLI DSLGIGCVSQ HQGQQYRSFE LAKNRDPEKE ENSTTRP00000000821/1-772 GCRGDILSAR PDEWLGRCLI DSLGIGCVSQ HQGQQYRSFE LAKNRDPEKE 301 350 ENSBTAP00000019108/1-769 SSLAFLSAFA VHPVSEGTLM YRLHKRFSAL ELERAYSEIE QLQAQIRNLT ENSP00000035307/1-772 GSSAFLSAFA VHPVSEGTLM YRLHKRFSAL ELERAYSEIE QLQAQIRNLT bmy_12911T0/1-778 ESSAFLSAFA VHPVSEGTLM YRLHKRFSAL ELERAYSEIE QLQAQIRNLT BACU000722/1-778 ESSAFLSAFA VHPVSEGTLM YRLHKRFSAL ELERAYSEIE QLQAQIRNLT ENSTTRP00000000821/1-772 GSSAFLSAFA VHPVSEGTLM YRLHKRFSAL ELERAYSEIE QLQAQIRNLT 351 400 ENSBTAP00000019108/1-769 ALTPEGEAGL SWPLGLPAPF TPHSRFEVLG WDYFTEQHTF SCVDGAPKCP ENSP00000035307/1-772 VLTPEGEAGL SWPVGLPAPF TPHSRFEVLG WDYFTEQHTF SCADGAPKCP bmy_12911T0/1-778 VLTPEGEAGL SWPIGLPAPF TPHSRFEVLG WDYFTEQHTF SCADGAPKCP BACU000722/1-778 VLTPEGEAGL SWPIGLPAPF TPHSRFEVLG WDYFTEQHTF SCADGAPKCP ENSTTRP00000000821/1-772 VLTPEGEAGL SWPIGLPAPF TPHSRFEVLG WDYFTEQHTF SCADGAPKCP 401 450 ENSBTAP00000019108/1-769 LQGASRADVG DAVETALEQL NRRYQPRLRF QKQRLLNGYR RFDPARGMEY ENSP00000035307/1-772 LQGASRADVG DALETALEQL NRRYQPRLRF QKQRLLNGYR RFDPARGMEY bmy_12911T0/1-778 LQGASRADVG DAVETALEQL NRRYQPRLRF QKQRLLNGYR RFDPARGMEY BACU000722/1-778 LQGASRADVG DAVETALEQL NRRYQPRLRF QKQRLLNGYR RFDPARGMEY ENSTTRP00000000821/1-772 LQGASRADVG DAVETALEQL NRRYQPRLRF QKQRLLNGYR RFDPARGMEY 451 500 ENSBTAP00000019108/1-769 TLDLLLEAVT QRGHRRALAR RVSLLRPLSR VEILPMPYVT EATRVQLVLP ENSP00000035307/1-772 TLDLLLECVT QRGHRRALAR RVSLLRPLSR VEILPMPYVT EATRVQLVLP bmy_12911T0/1-778 TLDLLLEAVT QRGHRRALAR RVSLLRPLSR VEILPMPYVT EATRVQLVLP BACU000722/1-778 TLDLLLEAVT QRGHRRALAR RVSLLRPLSR VEILPMPYVT EATRVQLVLP ENSTTRP00000000821/1-772 TLDLLLEAVT QRGHRRALAR RVSLLRPLSR VEILPMPYVT EATRVQLVLP 501 550 ENSBTAP00000019108/1-769 LQAAEAAAAP TFLEAFAAGV LEPREHALLT LLLVYGPREG GRGAPDPFVG ENSP00000035307/1-772 LLVAEAAAAP AFLEAFAANV LEPREHALLT LLLVYGPREG GRGAPDPFLG bmy_12911T0/1-778 LLVAEAAAAP AFLEAFAAGV LEPREHALLT LLLVYGPREG GRGAPDPFLG BACU000722/1-778 LLVAEAAAAP AFLEAFAAGV LEPREHALLT LLLVYGPREG GRGAPDPFLG ENSTTRP00000000821/1-772 LLVAEAAAAP AFLEAFAAGV LEPREHALLT LLLVYGPREG GRGAPDPFLG 551 600 ENSBTAP00000019108/1-769 VKAAAAELER RYPGTRLAWL AVRAEAPSQV RLMDVVSKKH PVDTLFFLAT ENSP00000035307/1-772 VKAAAAELER RYPGTRLAWL AVRAEAPSQV RLMDVVSKKH PVDTLFFLTT bmy_12911T0/1-778 VKAAAAELER RYPGTRLAWL AVRAEAPSQV RLLDVVSKKH PVDTLFFLTT BACU000722/1-778 VKAAAAELER RYPGTRLAWL AVRAEAPSQV RLLDVVSKKH PVDTLFFLTT ENSTTRP00000000821/1-772 VKAAAAELER RYPGTRLAWL AVRAEAPSQV RLLDVVSKKH PVDTLFFLAT 601 650 ENSBTAP00000019108/1-769 VWTRPGPEVL NRCRMNAISG WQAFFPVHFQ EFNPALAPQR PP---PGAGP ENSP00000035307/1-772 VWTRPGPEVL NRCRMNAISG WQAFFPVHFQ EFNPALSPQR SPPGPPGAGP bmy_12911T0/1-778 VWTRPGPEVL NRCRMNAISG WQAFFPVHFQ EFSPALAPQR SPQGPPGAGP BACU000722/1-778 VWTRPGPEVL NRCRMNAISG WQAFFPVHFQ EFSPALAPQR SPQGPPGAGP ENSTTRP00000000821/1-772 VWTRPGPEVL NRCRMNAISG WQAFFPVHFQ EFSPALAPQR SPQGPPGAGP 651 700 ENSBTAP00000019108/1-769 DPPSPPGADP ARGAAGGGRF DRQASAEGCF YNADYLAARA RLAADLAGQE ENSP00000035307/1-772 DPPSPPGADP SRGAPIGGRF DRQASAEGCF YNADYLAARA RLAGELAGQE bmy_12911T0/1-778 DPPSPPGADP ARGAPAGGRF DRQASAEGCF YNADYLAARA RLAGELAGQE BACU000722/1-778 DPPSPPGADP ARGAPAGGRF DRQASAEGCF YNADYLAARA RLAGELAGQE ENSTTRP00000000821/1-772 DPPSPPGAEP ARGAPVGGRF DRQASAEGCF YNADYLAARA RLAGELAGQE 701 750 ENSBTAP00000019108/1-769 EEEALEGLEV MDVFLRFSGL HLFRAVEPGL VQKFSLRDCS PRLSEELYHR ENSP00000035307/1-772 EEEALEGLEV MDVFLRFSGL HLFRAVEPGL VQKFSLRDCS PRLSEELYHR bmy_12911T0/1-778 EEEALEGLEV VDVFLRFSGL HLFRAVEPGL VQKFSVRDCS PRLSEELYHR BACU000722/1-778 EEEALEGLEV VDVCLRFSGL HLFRAVEPGL VQKFSVRDCS PRLSEELYHR ENSTTRP00000000821/1-772 EEEALEGLEV MDVFLRFSGL HLFRAVEPGL VQKFSVRDCS PRLSEELYHR 751 800 ENSBTAP00000019108/1-769 CRLSNLEGLG GRAQLAMALF EQEQANST ENSP00000035307/1-772 CRLSNLEGLG GRAQLAMALF EQEQANST bmy_12911T0/1-778 CRLSNLEGLG GRAQLAMALF EQEQANST BACU000722/1-778 CRLSNLEGLG GRAQLAMALF EQEQANST ENSTTRP00000000821/1-772 CRLSTLEGLG ARAQLAVALF EQEQANST