KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:33 2014 Check: 00 .. Name: ENSP00000254691/1-1037 Len: 1080 Check: 9158 Weight: 1.00 Name: ENSBTAP00000019112/1-1035 Len: 1080 Check: 8908 Weight: 1.00 Name: ENSTTRP00000010367/1-929 Len: 1080 Check: 9582 Weight: 1.00 Name: bmy_06107T0/1-567 Len: 1080 Check: 4414 Weight: 1.00 Name: BACU014996/1-321 Len: 1080 Check: 3245 Weight: 1.00 // 1 50 ENSP00000254691/1-1037 MATESTPSEI IERERKKLLE ILQHDPDSIL DTLTSRRLIS EEEYETLENV ENSBTAP00000019112/1-1035 MAAGSVPSQI IEKERKKLLE ILQQDPDCIL DTLTSRKLIS EEEYEILENI ENSTTRP00000010367/1-929 ---------- ---------- ---------- ---------- ---------- bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000254691/1-1037 TDLLKKSRKL LILVQKKGEA TCQHFLKCLF STFPQSAAIC GLRHEVLKHE ENSBTAP00000019112/1-1035 TDPLKKSRKL LILVQKKGEV SCQLFLNCLF NTFSQSATIC NLNQEVLKHE ENSTTRP00000010367/1-929 ---------- ---------- ---------- ---------- -----LLKHE bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000254691/1-1037 NTVPPQSMGA SSNSEDAFSP GIKQPEAPEI TVFFSEKEHL DLETSEFFRD ENSBTAP00000019112/1-1035 YIEPPLPIGT S--KEDVFLS GEKQPENPEI TTSFKEKECM DLETSESFTD ENSTTRP00000010367/1-929 YIEPPQPVGV S--REGIFFL GEKEPENPEI TMSFKEKEHL DLETSESFTD bmy_06107T0/1-567 ---------- ---------- ---------- -MSFKEKEHL DLETSESFTD BACU014996/1-321 ---------- ---------- ---------- -MSFV----- ---------- 151 200 ENSP00000254691/1-1037 KKTSYRETAL SARKNEKEYD TPEVTLSYSV EKVGCEVPAT ITYIKDGQRY ENSBTAP00000019112/1-1035 KKTSYQETAW SSKENEKEDN TSKFTSPQSV EIVEYEFPAT IEYLQDGQRY ENSTTRP00000010367/1-929 KKAGYRETAW SSRENEKEYD TPKFTSLRLV ENVECEFPAT IEYLQDEQRY bmy_06107T0/1-567 KEAGYRETAW SSRENEKEYN TPKFTSLQLV ENVEYEFPAT IEYLQDEQRY BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000254691/1-1037 EELDDSLYLG KEEYLGSVDT PEDAEATVEE EVYDDPEHVG YDGEEDFENS ENSBTAP00000019112/1-1035 EDPDDSLYLE QEDYLESVGY SEEANITLEE EAYSDPGGL- YDDREDSVYL ENSTTRP00000010367/1-929 EEPDDSLRLG KEEYLESVGY SEDADT--EE DAYDDPECII YDSKEDSLYS bmy_06107T0/1-567 EEPDDSLHLG KEEYLESVGY SEDADTPVEE DAYDEPECII YDSKEDYLYS BACU014996/1-321 ---------- ---------- ---------- -----PLCCI ---------- 251 300 ENSP00000254691/1-1037 ETTEFSGEEP SYEGSETSLS LEEEQEKSIE ---------- ---------- ENSBTAP00000019112/1-1035 ETTEFSDEEQ HYEDPETGMS LEEEEEKSME ---------- ---------- ENSTTRP00000010367/1-929 ETMEFSDEEQ NYEDSETGMS LEEEEEKSME ---------- ---------- bmy_06107T0/1-567 ETMEFSDEEQ NYEDSETGMS LEEEEEKNME GCHDIMGRGA EERHQMAAEK BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000254691/1-1037 ---------- ------ERKK VFKDVLLCLN MDRSRKVLPD FVKQFSLDRG ENSBTAP00000019112/1-1035 ---------- ------ERKN VFKDVLSCLN LDTSRKILPD FVKQFSLDRG ENSTTRP00000010367/1-929 ---------- ------ERKN -FKDVLSCLN PDTNRKLLPD FVKQFFLD-G bmy_06107T0/1-567 QLHKNFLDLS NLEFPQRKKK VFKDVLSCLN LDTSRKLLPD FVKQFFLDRG BACU014996/1-321 ---------- ---------- ---QIALC-- ---------- ---------- 351 400 ENSP00000254691/1-1037 CKWTPESPGD LAWNFLMKVQ ARDVTARDSI LSHKVLDEDS KEDLLAGVEN ENSBTAP00000019112/1-1035 CTWVPETPSD LAWNFLMKVQ ALDVTARDSV LRPKVLGEES KGELLTGVEN ENSTTRP00000010367/1-929 CRWVTETPGD LAWNFLMKVQ ALDMTVRDSV LRH-VLGEDS KGEFLTGVEN bmy_06107T0/1-567 CRWVTETPGD LAWNFLMKVQ ALDMTVRDSI LRHKVLGEDS KGEFLTGVEN BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000254691/1-1037 LEIRDIQTIN PLDVLCATML CSDSSLQRQV MSNMYQCQFA LPLLLPDAEN ENSBTAP00000019112/1-1035 LEIKETETIN PLDVLCASLL SSDSSLQREV MSNMYHCRFA LPLLLPDAEN ENSTTRP00000010367/1-929 LEIRQTETIN SLHVFCASVL YSDSSLQREV MSNTYQCQFA LP-LLPDAEK bmy_06107T0/1-567 LEIRETETIN PLDVLCASML YSDSSLQREV MSNICRKEQK HF----NAGG BACU014996/1-321 -NVKSCQT-- ---CISASLP FPATA----- ---RCRKEQK HF----NAGG 451 500 ENSP00000254691/1-1037 NKSILMLGAM KDIVKKQSTQ FSGGPTEDTE KFLTLMKMPV ISFVRLGYCS ENSBTAP00000019112/1-1035 NRSILMLGAM KDILKEQSTQ SSGGPTGDTE KFLTLMKMPV ISFVRLGYCS ENSTTRP00000010367/1-929 HKSILMLGAI KDIVKEQSTQ SSERPTEDT- EFLTLMKMPV ISFVHLGYCS bmy_06107T0/1-567 HEG-HCEGAV NAVFRKAYRE YR-------- KFLTLMKMPV ISFVRLGYCS BACU014996/1-321 HEG-HCEGAV NAVFRKAYRG YR-------- KFLTLMKMPV ISFVHLGYCS 501 550 ENSP00000254691/1-1037 FSKSRILNTL LSPAQLKLHK IFLHQDLPLL VLPRQISDGL VEITWCFPDS ENSBTAP00000019112/1-1035 FSKSRILNAL LSPAHLKSHK IFLHQDLPVQ VLPRQISDGL VEITWCFPDS ENSTTRP00000010367/1-929 FSKSRILNTL LSPAHLKSHK LF----PPVL VLPQQISDGL VEVTWSFPDS bmy_06107T0/1-567 FSKSRILNTL LSPAHLKSHK IFLHQDLPVL VLPQQISDGL VEVTWSFPDS BACU014996/1-321 FSKSSILNTL LSPAHLKSHK IFLHQDLPVL VLPQQISDGL VEVTWSFPDS 551 600 ENSP00000254691/1-1037 DDRKENP-FF QKPVALANLR GNLESFWTQF GFLMEVSSAV FFFTDCLGEK ENSBTAP00000019112/1-1035 SSLSESPSFP QKPVAVANLR GDLESFWTQF GFLMEVSSAV FFLTDCLGEK ENSTTRP00000010367/1-929 DGLKENPSFF QKAVAVANLR GDLESFWTQF GFLMEVSSAV FFFIDCLGEK bmy_06107T0/1-567 DGLKENPSFS QKAVAVANLL GDLES----- ---------- --------EK BACU014996/1-321 DGLKENPSFF QKAVAVANLR GDLESFWTQF GFLMEVSSAV FFFIDCLGEK 601 650 ENSP00000254691/1-1037 EWDLLMFLGE AAIERCYFVL SSQARESEEA QIFQRILNLK PAQLLFWERG ENSBTAP00000019112/1-1035 EWDLLMFLGE AAIERCYFVL SPQARESEEA QVFQRVLKLK PSQLLFWEEE ENSTTRP00000010367/1-929 EWDLLMFLGE AATERCYFVL SPQARGNEEA QISQRILKLK PSQLLFWEEE bmy_06107T0/1-567 EWDLLMFLGE AAIERCYFVL SSQARENEEA QIFQRILKLK PSQLLFWEEE BACU014996/1-321 EWDLLMFLGE AAIERCYFVL SPQARENEEA QIIQRILKLK PSQLLFWEEE 651 700 ENSP00000254691/1-1037 DAGDRRKNME GLQAALQEVM FSSCLRCVSV EDMAALAREL GIQVDEDFEN ENSBTAP00000019112/1-1035 EVGQRGGNME GLQAALQEVM -SSSLKCVSV EDMAPLAREL GIQVDQDFEN ENSTTRP00000010367/1-929 EAGETGRNME GIQAALKEVM -SSSLRCM-V EDVAPLAREL GIQIDHDFEN bmy_06107T0/1-567 EAGERGRNME GLQAALKEVM -SSSLRCVSV EDIAPLAREL GIQIDHDFEN BACU014996/1-321 EAGERGRNME GLQAALKEVM -SSSLRCVSV EDIAPLAREL GIQIDHEFEN 701 750 ENSP00000254691/1-1037 TQRIQVSSGE NMAGTAEGEG QQRHSQLKSS SKSQALMPIQ EPGTQCELSQ ENSBTAP00000019112/1-1035 IQGIQVSPSE NLAGAAEDEG SQRHSQRKNS SESPA----K MSETSCQINQ ENSTTRP00000010367/1-929 MQGIQVSPTE NLAGTAEDEG PQRHSQPKYS SESPA-MSVR EAEARCEISP bmy_06107T0/1-567 MQRIQVSPTE NLAGTAEDEG PQRHSQPNNS SESPA----- ---------- BACU014996/1-321 MQGIQVSPTE NLAGRAEDEG PQRHSQPKNS SESPA----- ---------- 751 800 ENSP00000254691/1-1037 NLQNLYGTPV FRPVLENSWL FPTRIGGNFN HVSLKASWVM GRPFGSEQRP ENSBTAP00000019112/1-1035 NRQNFHLTPV FMPPLRNFHP LPARIGGNFN HVSLKAPWAM GSRFWLQQRP ENSTTRP00000010367/1-929 NHQNFHLTPV FMPLLKNCCP LPTRNGGNFN RVSLTAPWVM VSQFWLEQRS bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000254691/1-1037 KWFHPLPFQN AGAQGRGKSF GIQSFHPQIF YSGERFMKFS RVARGCHSNG ENSBTAP00000019112/1-1035 KRFHPLPFQN TRAHSPGKRF GIQYFQPQRF YSGETFMRFS GTPWRHHMGR ENSTTRP00000010367/1-929 QSFHPSPFQN TRAHSPG-SF GIQ-FQPQRF YSGERFMKFS RTAQGRHMDK bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000254691/1-1037 TFGRLPRPIC QHVQACPERP QMMGTLERSR AVASKIGHSY SLDSQPARAV ENSBTAP00000019112/1-1035 TFGRPPRPMS QHIPAWPQRP QTIGTLERSG KEDSQVGHLH SLGSWPGGAV ENSTTRP00000010367/1-929 TFGRPPRPIS QHVQAWSERP QKMGARERSG EVDSQGGHLR SLGSQPARAD bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000254691/1-1037 GKPWPQQACT RVTELTEATG KLIRTSHIGK PHPQSFQPAA ATQK-LRPAS ENSBTAP00000019112/1-1035 GKP-GQVSAR GTKPTETVRT SMRTKPHIEN PHHQAFQAAG ATQKPRRTAP ENSTTRP00000010367/1-929 GKSQPRQVCA GTRPNEAIRK FMRTKSHIEN PHHQAFQAAG AIQKPIRTAS bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000254691/1-1037 QQGVQMKTQG GASNPALQIG SHPMCK---- -SSQFKSDQS NPSTVKHSQP ENSBTAP00000019112/1-1035 QQGAKLKTQG GPSNPSFQMG FHPMSYSMYL PSSQFRPNQH KSPQVKQSQH ENSTTRP00000010367/1-929 QQGAKLKTRG GPSNPSFQMG FSPMSNSKFL LSSQFKSNQP KSCQAKQFQH bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000254691/1-1037 KPFHSVPSQP KSSQTKSCQS QPSQTKPSPC KSTQPKPSQP WPPQSKPSQP ENSBTAP00000019112/1-1035 KPSQPVPFQP KPTQTKPTQH QAPRAESSPS KSTQPKPCQP QSSQSKPFQP ENSTTRP00000010367/1-929 -PSQPVFSQP KSSQAKPSQ- PTSQAKPSPS RPTQPKPCQP QSSHSRPSQP bmy_06107T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000254691/1-1037 RPPQPKSSST NPSQAKAHHS KAGQKRGGKH ENSBTAP00000019112/1-1035 KPTQPKSSHT GPSQAKAYCP RPGPKRGGKH ENSTTRP00000010367/1-929 RPTQPKSLLT GPSQAKAYDP RAGPKRVGKH bmy_06107T0/1-567 ---------- ---------- ---------- BACU014996/1-321 ---------- ---------- ----------