KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:33 2014 Check: 00 .. Name: ENSP00000261226/1-477 Len: 477 Check: 1042 Weight: 1.00 Name: ENSBTAP00000019113/1-477 Len: 477 Check: 8437 Weight: 1.00 Name: BACU000963/1-470 Len: 477 Check: 170 Weight: 1.00 Name: bmy_03587T0/1-476 Len: 477 Check: 2271 Weight: 1.00 Name: ENSTTRP00000008865/1-451 Len: 477 Check: 5024 Weight: 1.00 // 1 50 ENSP00000261226/1-477 MPGSDTALTV DRTYSYPGRH HRCKSRVERH DMNTLSLPLN IRRGGSDTNL ENSBTAP00000019113/1-477 MPGSDTALTV DRTYSDPGRH HHCKRRVERH DMNTLSLPLN IRRGGSDTNL BACU000963/1-470 ----MCLSST GNDRDVPGIP VR---KVERH DMNTLSLPLN IRRGGSDTNL bmy_03587T0/1-476 -MSVVCAQTP SQRLSLRLPV LKCFFPVERH DMNTLSLPLN IRRGGSDTNL ENSTTRP00000008865/1-451 ---------- ---------- ------VERH DMNTLSLPLN IRRGGSDTNL 51 100 ENSP00000261226/1-477 NFDVPDGILD FHKVKLTADS LKQKILKVTE QIKIEQTSRD GNVAEYLKLV ENSBTAP00000019113/1-477 NFDVPDGILD FHKVKLNADS LRQKILKVTE QIKIEQTSRD GNVAEYLKLV BACU000963/1-470 NFDVPDGILD FHKVKLSADS LKQKILKVTE QIRIEQTSRD GNVAEYLKLV bmy_03587T0/1-476 NFDVPDGILD FHKVKLSADS LKQKILKVTE QIRIEQTSRD GNVAEYLKLV ENSTTRP00000008865/1-451 NFDVPDGILD FHKVKLSADS LKQKILKVTE QIRIEQTSRD GNVAEYLELV 101 150 ENSP00000261226/1-477 NNADKQQAGR IKQVFEKKNQ KSAHSIAQLQ KKLEQYHRKL REIEQNGASR ENSBTAP00000019113/1-477 NSADKQQAGR IKQVFEKKNQ KSAHSIAQLQ KKLDQYHRKL RELEQNGALR BACU000963/1-470 NSADKQQAGR IKQVFEKKNQ KSAQSIAQLQ KKLEQYHRKL RELEQNGTPR bmy_03587T0/1-476 SSADKQQAGR IKQVFEKKNQ KSAQSIAQLQ KKLEQYHRKL RELEQNGAPR ENSTTRP00000008865/1-451 SSADKQQAGR IKQVFEKKNQ KSAQSIAQLQ KKLEQYHRKL RELEQNGAPR 151 200 ENSP00000261226/1-477 SSKDISKDHL KDIHRSLKDA HVKSRTAPHC MESSKSGMPG VSLTPPVFVF ENSBTAP00000019113/1-477 SAKDTAKDQL KDIPPSLKDA QAKSRTAPHS LESSKSGMPG VSLTPPVFVF BACU000963/1-470 SSKDIAKDNL KDIQPSLKDA QAKARTAPHS LESGKSGLPG VSLTPPVFVF bmy_03587T0/1-476 SSKDIAKDNL KDIQPSLKDA QAKARTAPHS LESSKSGLPG VSLTPPVFVF ENSTTRP00000008865/1-451 SSKDIAKDNL KDIQSPLKDA QAKARTAPHS LESSKSGLPG VSLTPPVFVF 201 250 ENSP00000261226/1-477 NKSREFANLI RNKFGSADNI AHLKNSLEEF RPEASARAYG GSATIVNKPK ENSBTAP00000019113/1-477 NKSREFANLI RNKFGSADNI AHLKNSLEEF RPEASARVYG GSATIVNKPK BACU000963/1-470 SKSREFANLI RNKFGSADNI AHLRNSLEEF RPEASSRAYG GSATIVNKPK bmy_03587T0/1-476 SKSREFANLI RNKFGSADNI AHLRNSLEEF RPEASARAYG GSATIVNKPK ENSTTRP00000008865/1-451 SKPREFANLI RNKFGSADNI AHLRNSLEEF RPETSARAYG GSATIVNKPK 251 300 ENSP00000261226/1-477 YGSDDECSSG TSGSADSNGN QSFGAGGAST LDSQGKLAVI LEELREIKDT ENSBTAP00000019113/1-477 YGSDDECSSG TSGSADSNGN QSFAAGGSGA LDSQGKLTAI LEELREIKDT BACU000963/1-470 YGSDDECSSG TSGSADSNGN QSFGAGGTGT LDSQGKLTAI LEELREIKDT bmy_03587T0/1-476 YGSDDECSSG TSGSADSNGN QSFGAGGTGT LDSQGKLTAI LEELREIKDT ENSTTRP00000008865/1-451 YGSDDECSSG TSGSADSNGN QSFGAGGTGA LDSQGKLTAI LEELREIKDT 301 350 ENSP00000261226/1-477 QAQLAEDIEA LKVQFKREYG FISQTLQEER YRYERLEDQL HDLTDLHQHE ENSBTAP00000019113/1-477 QAQLAEDIEA LKVQFKREYG FISQTLQEER YRCERLEDQL HDLTDLHQHE BACU000963/1-470 QAQLAEDIEA LKVQFKREYG FISQTLQEET YRYERLEDQL HDLTDLHQHE bmy_03587T0/1-476 QAQLAEDIEA LKVQFKREYG FISQTLQEET YRYERLEDQL HDLTDLHQHE ENSTTRP00000008865/1-451 QAQLAEDIEA LKAQFKREYG FISQTLQEET YRYERLEDQL HDLTDLHQHE 351 400 ENSP00000261226/1-477 TANLKQELAS IEEKVAYQAY ERSRDIQEAL ESCQTRISKL ELHQQEQQAL ENSBTAP00000019113/1-477 TANLKQELAS IEEKVAYQAY ERSRDIQEAL ESCQTRISKL ELHQQEQQAL BACU000963/1-470 TANLKQELAS IEEKVAYQAY ERSRDIQEAL ESCQTRISKL ELHQQEQQAL bmy_03587T0/1-476 TANLKQELAS IEEKVAYQAY ERSRDIQEAL ESCQTRISKL ELHQQEQQAL ENSTTRP00000008865/1-451 TSNLKQELAS IEEKVAYQAH ERSRDIQEAL ESCQTRISKL ELHQQEQQAL 401 450 ENSP00000261226/1-477 QTDTVNAKVL LGRCINVILA FMTVILVCVS TIAKFVSPMM KSRCHILGTF ENSBTAP00000019113/1-477 QTDTVNAKVL LGKCINVVLA FMTVILVCVS TIAKFISPMM KSRFHILGTF BACU000963/1-470 QSDTVNAKVL LGKCINVVLA FMTVILVCVS TIAKFISPMM RSRFHILGTF bmy_03587T0/1-476 QSDTVNAKVL LGKCINVVLA FMTVILVCVS TIAKFISPMM KSRFHILGTF ENSTTRP00000008865/1-451 QTDTVNAKVL LGKCINVVLA FMTVILVCVS TIAKFISPMM KSRFHILGTF 451 500 ENSP00000261226/1-477 FAVTLLAIFC KNWDHILCAI ERMIIPR ENSBTAP00000019113/1-477 FAVTLFAIFC KNWDHILCAI ERIIIPR BACU000963/1-470 FAVTLLAIFC KNWDHILCAI ERIIIPR bmy_03587T0/1-476 FAVTLLAIFC KNWDHILCAI ERIIIPR ENSTTRP00000008865/1-451 FAVTLLAIFC KNWDHILCAI ERIIIPR