KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:34 2014 Check: 00 .. Name: ENSTTRP00000004893/1-590 Len: 597 Check: 1124 Weight: 1.00 Name: bmy_08297T0/1-545 Len: 597 Check: 865 Weight: 1.00 Name: BACU008387/1-451 Len: 597 Check: 1041 Weight: 1.00 Name: ENSP00000261739/1-590 Len: 597 Check: 7023 Weight: 1.00 Name: ENSBTAP00000019114/1-590 Len: 597 Check: 7178 Weight: 1.00 // 1 50 ENSTTRP00000004893/1-590 MSSACDASGH FPLHILVWNN DYRQLEKELQ GQNVEALDPR GRTLLHLAVS bmy_08297T0/1-545 MKASSEDTVS ISEPVV---- -RKGGKGTMA GFAQEAKSAM FSSLL----- BACU008387/1-451 ---------- ---------- --------MA GFAQEAKSAM FSSLL----- ENSP00000261739/1-590 MSSACDAGDH YPLHLLVWKN DYRQLEKELQ GQNVEAVDPR GRTLLHLAVS ENSBTAP00000019114/1-590 MSSPRDASGD FPLHLLVWNN DYRQLEKELR DQNVEALDPR GRTLLHLAVS 51 100 ENSTTRP00000004893/1-590 LGHLESARVL LRHKADVTKE NREGWTVLHE AVSTGDPEMV YTVLQHRDFH bmy_08297T0/1-545 ------SQVR AR-------- ------ILHE AVSTGDPEMV YTVLQHRDFH BACU008387/1-451 ------SQVR AR-------- ------VLHE AVSTGDPEMV YTVLQHRDFH ENSP00000261739/1-590 LGHLESARVL LRHKADVTKE NRQGWTVLHE AVSTGDPEMV YTVLQHRDYH ENSBTAP00000019114/1-590 LGHLESARVL LRHKADVTKE NREGWTVLHE AVSTGDPEMV YTVLQHRDFH 101 150 ENSTTRP00000004893/1-590 NTSMALEGVP ELLQKILEAP DFYVQMKWEF TSWVPLVSRI CPNDVCRIWK bmy_08297T0/1-545 NTSMALEGVP ELLQKILECP ---------- --WFPEYARM I--------- BACU008387/1-451 NTSMALEGVP ELLQKILEAP DFYVQMKWEF TSWVPLVSRI CPNDVCRIWK ENSP00000261739/1-590 NTSMALEGVP ELLQKILEAP DFYVQMKWEF TSWVPLVSRI CPNDVCRIWK ENSBTAP00000019114/1-590 NTSMALEGVP ELLQKILEAP DFYVQMKWEF TSWVPLVSRI CPNDVCRIWK 151 200 ENSTTRP00000004893/1-590 SGAKLRVDIT LLGFENMSWI RGRRSFIFKG EDNWAELMEV NHDDKVVTTE bmy_08297T0/1-545 -GAKLRVDIT LLGFENMSWI RGRRSFIFKG EDNWAELMEV NHDDKVVTTE BACU008387/1-451 SGAKLRVDIT LLGFENMSWI RGRRSFIFKG EDNWAELMEV NHDDKVVTTE ENSP00000261739/1-590 SGAKLRVDIT LLGFENMSWI RGRRSFIFKG EDNWAELMEV NHDDKVVTTE ENSBTAP00000019114/1-590 SGAKLRVDIT LLGFENMSWI RGRRSFIFKG EDNWAELMEV NHDDKVVTTE 201 250 ENSTTRP00000004893/1-590 HFDLSQEMER LTLDLMKPKG REVERRLTSP VINTSLDTKN IAFERTKSGF bmy_08297T0/1-545 HFDLSQEMER LTLDLMKPKG REVERRLTSP VINTSLDTKN IAFERTKSGF BACU008387/1-451 HFDLSQEMER LTLDLMKPKG REVERRLISP VINTSLDTKN IAFERTKSGF ENSP00000261739/1-590 RFDLSQEMER LTLDLMKPKS REVERRLTSP VINTSLDTKN IAFERTKSGF ENSBTAP00000019114/1-590 HFDLSQEMER LTLDLMKPKS REVERRLTSP VINTSLDTKN IAFERTKSGF 251 300 ENSTTRP00000004893/1-590 WGWRTDKAEV VNGYEAKVYT VNNVSVITKI RTEH--LTEE EKKRYK---- bmy_08297T0/1-545 WGWRTDKAEV VNGYEAKHSC SCYAYLLSFD SPCHCFLSHT SLKVYTVNNV BACU008387/1-451 WGWRTDKAEV VNGYEAK--- ---------- ---------- ---------- ENSP00000261739/1-590 WGWRTDKAEV VNGYEAKVYT VNNVNVITKI RTEH--LTEE EKKRYK---- ENSBTAP00000019114/1-590 WGWRTDKAEV VNGYEAKVYT VNNVSVITKI RTEH--LTEE EKKRYK---- 301 350 ENSTTRP00000004893/1-590 XXXXXXXXXX XXXXXXXXXX XDLTTECATA NNPTAITPDE YFNEEFDLKD bmy_08297T0/1-545 TDRNPLESLL GTVEHQFGAQ GDLTTECATA NNPTAITPDE YFNKEFDLKD BACU008387/1-451 ---------- ---------- -DLTTECATA NNPTAITPDE YFNEEFDLKD ENSP00000261739/1-590 ADRNPLESLL GTVEHQFGAQ GDLTTECATA NNPTAITPDE YFNEEFDLKD ENSBTAP00000019114/1-590 ADRNPLESLL GTVEHQFGAQ GDLTTECATA HNPTAITPDE YFNEEFDLKD 351 400 ENSTTRP00000004893/1-590 RDIGRPKELT IRTQKFKAML WMCEEFPLSL VEQVIPIIDL MARTSAHFAR bmy_08297T0/1-545 RDIGRPKELT IRTQKFKAML WMCEEFPLSL VEQVIPIIDL MARTSAHFAR BACU008387/1-451 RDIGRPKELT IRTQKFKAML WMCEEFPLSL VEQVIPIIDL MARTSAHFAR ENSP00000261739/1-590 RDIGRPKELT IRTQKFKAML WMCEEFPLSL VEQVIPIIDL MARTSAHFAR ENSBTAP00000019114/1-590 RDIGRPKELT IRTQKFKATL WMCEEFPLSL VEQVVPIIDL MARTSAHFAR 401 450 ENSTTRP00000004893/1-590 LRDFIKLEFP PGFPVKIEIP LFHVLNARIT FGNVNGCS-T AEETVSQNVE bmy_08297T0/1-545 LRDFIKLEFP PGFPVKIGDP PSHQFYLQMV LTDEKGIKIT AEETVSQNVE BACU008387/1-451 LRDFIKLEFP PGFPVKI--- ---------- ---------- ---------- ENSP00000261739/1-590 LRDFIKLEFP PGFPVKIEIP LFHVLNARIT FGNVNGCS-T AEESVSQNVE ENSBTAP00000019114/1-590 LRDFIKLEFP PGFPVKLEIP LFHVLNARIT FGNVNGCS-T AEETVSQHVE 451 500 ENSTTRP00000004893/1-590 GTPSDSASTL TNFEVDQSVF EIPESYHVQD NGRNVYLQDE DYEIMQFAIQ bmy_08297T0/1-545 GTPSDSASTL TNFEVDQSVF EIPESYHVQD NGRNVYLQDE DYEIMQFAIQ BACU008387/1-451 ------ASTL TNFEVDQSVF EIPESYHVQD NGRNVYLQDE DYEIMQFAIQ ENSP00000261739/1-590 GTQADSASHI TNFEVDQSVF EIPESYYVQD NGRNVHLQDE DYEIMQFAIQ ENSBTAP00000019114/1-590 GTQPDSASPL TNFEVDQSVF EIPESYHVQD NGRNVHLQDE DYEIMQFAIQ 501 550 ENSTTRP00000004893/1-590 QSLLESRRSQ ELSGPASSGG TGQAHTCDAQ DERAVQESLP SDSEGLCPGA bmy_08297T0/1-545 QSLLESRRSQ ELSGPASSGG TGHAHTCDAQ DERAVQESLP TGSEGLCPGA BACU008387/1-451 QSLLESRRSQ ELSGPASSGG TGQAHTCDAQ DERAVQESLP TGSEGLCPGA ENSP00000261739/1-590 QSLLESSRSQ ELSGPASNGG ISQTNTYDAQ YERAIQESLL TSTEGLCPSA ENSBTAP00000019114/1-590 QSLLESSRSQ ELSGPASNGG INQAHAYDAQ YERAIQESLL SSSEGLGSGT 551 600 ENSTTRP00000004893/1-590 SRETSRFDSD LQLAMELSAK ELEEHELRLR EEEAELQQVL QLSLTEK bmy_08297T0/1-545 SRETSTFDSD LQLAMELSAK ELEEHELRLR EEEAELQQVL QLSLTEK BACU008387/1-451 SRETSSFDSD LQLAMELSAK ELEEHELRLR EEEAELQQVL QLSLTEK ENSP00000261739/1-590 LSETSRFDND LQLAMELSAK ELEEWELRLQ EEEAELQQVL QLSLTDK ENSBTAP00000019114/1-590 SSETSRFDSD LQLAMELSAK ELEERELRLR EEEAELQQVL QLSLTEK