KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:39 2014 Check: 00 .. Name: ENSTTRP00000009819/1-247 Len: 312 Check: 7362 Weight: 1.00 Name: ENSP00000254101/1-272 Len: 312 Check: 5958 Weight: 1.00 Name: bmy_22107T0/1-312 Len: 312 Check: 9325 Weight: 1.00 Name: BACU009436/1-272 Len: 312 Check: 5889 Weight: 1.00 Name: ENSBTAP00000019129/1-272 Len: 312 Check: 5889 Weight: 1.00 // 1 50 ENSTTRP00000009819/1-247 ---------- ---------- ---------- ---------- MGNTTSDRVA ENSP00000254101/1-272 ---------- ---------- ---------- ---------- MGNTTSDRVS bmy_22107T0/1-312 LARVPRRRGG ARGSPDATAG VSLAPCCSPR QVAPDASCTA MGNTTSDRVA BACU009436/1-272 ---------- ---------- ---------- ---------- MGNTTSDRVA ENSBTAP00000019129/1-272 ---------- ---------- ---------- ---------- MGNTTSDRVA 51 100 ENSTTRP00000009819/1-247 GERHGAKAAR AEGAGGHAPG KEHKIMVGST DDPSVFSLPD SKLPGDKEFV ENSP00000254101/1-272 GERHGAKAAR SEGAGGHAPG KEHKIMVGST DDPSVFSLPD SKLPGDKEFV bmy_22107T0/1-312 GERHGAKAAR AEGAGGHAPG KEHKIMVGST DDPSVFSLPD SKLPGDKEFV BACU009436/1-272 GERHGAKAAR AEGAGGHAPG KEHKIMVGST DDPSVFSLPD SKLPGDKEFV ENSBTAP00000019129/1-272 GERHGAKAAR AEGAGGHAPG KEHKIMVGST DDPSVFSLPD SKLPGDKEFV 101 150 ENSTTRP00000009819/1-247 SWQQDLEDSV KPTQQARPTV IRWSEGGKEV FISGSFNNWS TKIPLIKXXX ENSP00000254101/1-272 SWQQDLEDSV KPTQQARPTV IRWSEGGKEV FISGSFNNWS TKIPLIKSHN bmy_22107T0/1-312 SWQQDLEDSV KPTQQARPTV IRWSEGGKEV FISGSFNNWS TKIPLIKSHN BACU009436/1-272 SWQQDLEDSV KPTQQARPTV IRWSEGGKEV FISGSFNNWS TKIPLIKSHN ENSBTAP00000019129/1-272 SWQQDLEDSV KPTQQARPTV IRWSEGGKEV FISGSFNNWS TKIPLIKSHN 151 200 ENSTTRP00000009819/1-247 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000254101/1-272 DFVAILDLPE GEHQYKFFVD GQWVHDPSEP VVTSQLGTIN NLIHVKKSDF bmy_22107T0/1-312 DFVAILDLPE GEHQYKFFVD GQWVHDPSEP VVTSQLGTIN NLIHVKKSDF BACU009436/1-272 DFVAILDLPE GEHQYKFFVD GQWVHDPSEP VVTSQLGTIN NLIHVKKSDF ENSBTAP00000019129/1-272 DFVAILDLPE GEHQYKFFVD GQWVHDPSEP VVTSQLGTIN NLIHVKKSDF 201 250 ENSTTRP00000009819/1-247 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXSEE RFKSPPILPP ENSP00000254101/1-272 EVFDALKLDS MESSETSCRD LSSSPPGPYG QEMYAFRSEE RFKSPPILPP bmy_22107T0/1-312 EVFDALKLDS MESSETSCRD LSSSPPGPYG QEMYVFRSEE RFKSPPILPP BACU009436/1-272 EVFDALKLDS MESSETSCRD LSSSPPGPYG QEMYVFRSEE RFKSPPILPP ENSBTAP00000019129/1-272 EVFDALKLDS MESSETSCRD LSSSPPGPYG QEMYVFRSEE RFKSPPILPP 251 300 ENSTTRP00000009819/1-247 HLLQVILNKD TNISCDPALL PEPNHVMLNH LYALSIK--- ---------- ENSP00000254101/1-272 HLLQVILNKD TNISCDPALL PEPNHVMLNH LYALSIKDSV MVLSATHRYK bmy_22107T0/1-312 HLLQVILNKD TNISCDPALL PEPNHVMLNH LYALSIKDSV MVLSATHRYK BACU009436/1-272 HLLQVILNKD TNISCDPALL PEPNHVMLNH LYALSIKDSV MVLSATHRYK ENSBTAP00000019129/1-272 HLLQVILNKD TNISCDPALL PEPNHVMLNH LYALSIKDSV MVLSATHRYK 301 350 ENSTTRP00000009819/1-247 ---------- -- ENSP00000254101/1-272 KKYVTTLLYK PI bmy_22107T0/1-312 KKYVTTLLYK PI BACU009436/1-272 KKYVTTLLYK PI ENSBTAP00000019129/1-272 KKYVTTLLYK PI