KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:39 2014 Check: 00 .. Name: bmy_17899T0/1-590 Len: 791 Check: 2636 Weight: 1.00 Name: ENSBTAP00000019135/1-766 Len: 791 Check: 6181 Weight: 1.00 Name: ENSP00000222584/1-784 Len: 791 Check: 2057 Weight: 1.00 Name: BACU018545/1-742 Len: 791 Check: 6644 Weight: 1.00 Name: ENSTTRP00000001809/1-742 Len: 791 Check: 6568 Weight: 1.00 // 1 50 bmy_17899T0/1-590 MGVFVADQKK EEEEEAAAAA AAAAMATEGG KTSEPENNNK KPKTSGSQDS ENSBTAP00000019135/1-766 ---------- ---------- ----MATEGG KTSEPENNYK KPKTSGSQDS ENSP00000222584/1-784 ----MSDQKK EEEEEAAAAA A---MATEGG KTSEPENNNK KPKTSGSQDS BACU018545/1-742 ---------- ---------- ---------- ---------- --------DS ENSTTRP00000001809/1-742 ---------- ---------- ---------- ---------- --------DS 51 100 bmy_17899T0/1-590 QPSPLALLAA TCSKIGTPGE NQATGQQQII IDPSQGLVQL QNQPQQLELV ENSBTAP00000019135/1-766 QPSPLALLAA TCSKIGTPGE NQATGQQQII IDPSQGLVQL QNQPQQLELV ENSP00000222584/1-784 QPSPLALLAA TCSKIGTPGE NQATGQQQII IDPSQGLVQL QNQPQQLELV BACU018545/1-742 QPSPLALLAA TCSKIGTPGE NQATGQQQII IDPSQGLVQL QNQPQQLELV ENSTTRP00000001809/1-742 QPSPLALLAA TCSKIGTPGE NQATGQQQII IDPSQGLVQL QNQPQQLELV 101 150 bmy_17899T0/1-590 TTQLAGNAWQ LVASTPPASK ENNVSQPASS SSSSSSSNNG SASPTKTKSG ENSBTAP00000019135/1-766 TTQLAGNAWQ LVASTPPASK ENNISQPASS SSSSSTSNNG SASPTKTKSG ENSP00000222584/1-784 TTQLAGNAWQ LVASTPPASK ENNVSQPASS SSSSSSSNNG SASPTKTKSG BACU018545/1-742 TTQLAGNAWQ LVASTPPASK ENNVSQPASS SSSSSSSNNG SASPTKTKSG ENSTTRP00000001809/1-742 TTQLAGNAWQ LVASTPPASK ENNVSQPASS SSSSSSSNNG SASPTKTKSG 151 200 bmy_17899T0/1-590 NSSSPGQFQV IQVQNPSGSV QYQVIPQLQT VEGQQIQINP TSSSSLQDLQ ENSBTAP00000019135/1-766 NSSSPGQFQV IQVQNPSGSV QYQVIPQLQT VEGQQIQINP TSSSSLQDLQ ENSP00000222584/1-784 NSSTPGQFQV IQVQNPSGSV QYQVIPQLQT VEGQQIQINP TSSSSLQDLQ BACU018545/1-742 NSSSPGQFQV IQVQNPSGSV QYQVIPQLQT VEGQQIQINP TSSSSLQDLQ ENSTTRP00000001809/1-742 NSSSPGQFQV IQVQNPSGSV QYQVIPQLQT VEGQQIQINP TSSSSLQDLQ 201 250 bmy_17899T0/1-590 GQIQLISAGN NQAILTAANR TASGNILAQN LANQTVPVQI RPGVSIPLQL ENSBTAP00000019135/1-766 GQIQLISAGN NQAILTAGNR TASGNILAQN LANQTVPVQI RPGVSIPLQL ENSP00000222584/1-784 GQIQLISAGN NQAILTAANR TASGNILAQN LANQTVPVQI RPGVSIPLQL BACU018545/1-742 GQIQLISAGN NQAILTAANR TASGNILAQN LANQTVPVQI RPGVSIPLQL ENSTTRP00000001809/1-742 GQIQLISAGN NQAILTAANR TASGNILAQN LANQTVPVQI RPGVSIPLQL 251 300 bmy_17899T0/1-590 QTLPGTQAQV VTTLPINIGG VTLALPVINS VAAGGGTGQV GQSAPTTDGG ENSBTAP00000019135/1-766 QTLPGTQAQV VTTLPINIGG VTLALPVINS VAAGGGTAQV GQPATTTESG ENSP00000222584/1-784 QTLPGTQAQV VTTLPINIGG VTLALPVINN VAAGGGTGQV GQPAATADSG BACU018545/1-742 QTLPGTQAQV VTTLPINIGG VTLALPVINS VAAGGGTGQV GQSAPTTDGG ENSTTRP00000001809/1-742 QTLPGTQAQV VTTLPINIGG VTLALPVINS VAAGGGTGQV GQSAPTTDGG 301 350 bmy_17899T0/1-590 TSNGSQLVPT PT-TTASAST MPESPSSSTA CTTTASTSLS SSDTLVSSAD ENSBTAP00000019135/1-766 TSNGSQLAST PT-TTTASAS MPESPSSSTT CTTTASTSLT SSDTLVSSAD ENSP00000222584/1-784 TSNGNQLVST PTNTTTSAST MPESPSSSTT CTTTASTSLT SSDTLVSSAD BACU018545/1-742 TSNGSQLVPT PT-TTASAST MPESPSSSTA CTTTASTSLS SSDTLVSSAD ENSTTRP00000001809/1-742 TSNGSQLVPT PT-TTASAST MPESPSSSTA CTTTASASLS SSDTLVSSAD 351 400 bmy_17899T0/1-590 TGQYASTSAS SSERTIEDSQ TPAATESEAQ SSSQLQSNGI QSTQDQSNSL ENSBTAP00000019135/1-766 TGQYASTSAS SSERTIEDSQ TPAATESEAQ SSSQLQSNGI QNTQDQSNSL ENSP00000222584/1-784 TGQYASTSAS SSERTIEESQ TPAATESEAQ SSSQLQPNGM QNAQDQSNSL BACU018545/1-742 TGQYASTSAS SSERTIEDSQ TPAATESEAQ SSSQLQSNGI QNTQDQSNSL ENSTTRP00000001809/1-742 TGQYASTSAS SSERTIEDSQ TPAATESEAQ SSSQLQSNGI QNTQDQSNSL 401 450 bmy_17899T0/1-590 QQVQIVGQPI LQQIQIQQPQ QQIIQAIPPQ SFQLQSGQTI QTIQQQPLQN ENSBTAP00000019135/1-766 QQVQIVGQPI LQQIQIQQPQ QQIIQAIPPQ SFQLQSGQTI QTIQQQPLQN ENSP00000222584/1-784 QQVQIVGQPI LQQIQIQQPQ QQIIQAIPPQ SFQLQSGQTI QTIQQQPLQN BACU018545/1-742 QQVQIVGQPI LQQIQIQQPQ QQIIQAIPPQ SFQLQSGQTI QTIQQQPLQN ENSTTRP00000001809/1-742 QQVQIVGQPI LQQIQIQQPQ QQIIQAIPPQ SFQLQSGQTI QTIQQQPLQN 451 500 bmy_17899T0/1-590 VQLQAVNPTQ VLIRAPTLTP SGQISWQTVQ VQNIQSLSNL QVQNAGLSQQ ENSBTAP00000019135/1-766 VQLQAVNPTQ VLIRAPTLTP SGQITWQTVQ VQNIQSLSNL QVQNAGLSQQ ENSP00000222584/1-784 VQLQAVNPTQ VLIRAPTLTP SGQISWQTVQ VQNIQSLSNL QVQNAGLSQQ BACU018545/1-742 VQLQAVNPTQ VLIRAPTLTP SGQISWQTVQ VQNIQSLSNL QVQNAGLSQQ ENSTTRP00000001809/1-742 VQLQAVNPTQ VLIRAPTLTP SGQISWQTVQ VQNIQSLSNL QVQNAGLSQQ 501 550 bmy_17899T0/1-590 LTITPVSSSG GTTLAQIAPV AVAGAPITLN TAQLASVPNL QTVSVANLGA ENSBTAP00000019135/1-766 LTITPVSSSG GTTLAQIAPV AVAGAPITLN TAQLASVPNL QTVSVANLGA ENSP00000222584/1-784 LTITPVSSSG GTTLAQIAPV AVAGAPITLN TAQLASVPNL QTVSVANLGA BACU018545/1-742 LTITPVSSSG GTTLAQIAPV AVAGAPITLN TAQLASVPNL QTVSVANLGA ENSTTRP00000001809/1-742 LTITPVSSSG GTTLAQIAPV AVAGAPITLN TAQLASVPNL QTVSVANLGA 551 600 bmy_17899T0/1-590 AGVQVQGVPV TITSVAGK-- ---------- -----STAIF SL-------- ENSBTAP00000019135/1-766 AGVQVQGVPV TITSVAGQQQ GQDGVKVQQA TIAPVTVAVG GIANATIGAV ENSP00000222584/1-784 AGVQVQGVPV TITSVAGQQQ GQDGVKVQQA TIAPVTVAVG GIANATIGAV BACU018545/1-742 AGVQVQGVPV TITSVAGQQQ GQDGVKVQQA TIAPVTVAVG GIANATIGAV ENSTTRP00000001809/1-742 AGVQVQGVPV TITSVAGQQQ GQDGVKVQQA TIAPVTVAVG GIANATIGAV 601 650 bmy_17899T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019135/1-766 SPDQLTQVHL QQGQQASDQE VQPGKRLRRV ACSCPNCREG EGRGSNEPGK ENSP00000222584/1-784 SPDQLTQVHL QQGQQTSDQE VQPGKRLRRV ACSCPNCREG EGRGSNEPGK BACU018545/1-742 SPDQLTQVHL QQGQQASDQE VQPGKRLRRV ACSCPNCREG EGRGSNEPGK ENSTTRP00000001809/1-742 SPDQLTQVHL QQGQQASDQE VQPGKRLRRV ACSCPNCREG EGRGSNEPGK 651 700 bmy_17899T0/1-590 ---------- ---------- ---------- -------WL- ---------- ENSBTAP00000019135/1-766 KKQHICHIEG CGKVYGKTSH LRAHLRWHTG ERPFICNWMF CGKRFTRSDE ENSP00000222584/1-784 KKQHICHIEG CGKVYGKTSH LRAHLRWHTG ERPFICNWMF CGKRFTRSDE BACU018545/1-742 KKQHICHIEG CGKVYGKTSH LRAHLRWHTG ERPFICNWMF CGKRFTRSDE ENSTTRP00000001809/1-742 KKQHICHIEG CGKVYGKTSH LRAHLRWHTG ERPFICNWMF CGKRFTRSDE 701 750 bmy_17899T0/1-590 ---------- ---------- ---------- ---------- -------LIT ENSBTAP00000019135/1-766 LQRHRRTHTG EKRFECPECS KRFMRSDHLS KHVKTHQNKK GGGTALAIVT ENSP00000222584/1-784 LQRHRRTHTG EKRFECPECS KRFMRSDHLS KHVKTHQNKK GGGTALAIVT BACU018545/1-742 LQRHRRTHTG EKRFECPECS KRFMRSDHLS KHVKTHQNKK GGGTALAIVT ENSTTRP00000001809/1-742 LQRHRRTHTG EKRFECPECS KRFMRSDHLS KHVKTHQNKK GGGTALAIVT 751 800 bmy_17899T0/1-590 VGYCFSLLTQ I--------- ---------- ---------- - ENSBTAP00000019135/1-766 SGELDSSVTE VLGSPRIVTV AAISQDSNPA TPNVSTNMEE F ENSP00000222584/1-784 SGELDSSVTE VLGSPRIVTV AAISQDSNPA TPNVSTNMEE F BACU018545/1-742 SGELDSSVTE VLGSPRIVTV AAISQDSNPA TPNVSTNMEE F ENSTTRP00000001809/1-742 SGELDSSVTE VLGSPRIVTV AAISQDSNPA TPNVSTNMEE F