KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:48 2014 Check: 00 .. Name: ENSP00000402537/1-777 Len: 777 Check: 9055 Weight: 1.00 Name: ENSBTAP00000019182/1-764 Len: 777 Check: 4759 Weight: 1.00 Name: ENSTTRP00000005444/1-456 Len: 777 Check: 687 Weight: 1.00 Name: bmy_11616T0/1-683 Len: 777 Check: 3168 Weight: 1.00 Name: BACU001810/1-651 Len: 777 Check: 5551 Weight: 1.00 // 1 50 ENSP00000402537/1-777 MFSLKPPKPT FRSYLLPPPQ TDDKINSEPK IKKLEPVLLP GEIVVNEVNF ENSBTAP00000019182/1-764 MFSLKPPRPT FRSYLLPPPQ TDDKINSEPK IKKLEPVLLP GEIVVNEVNF ENSTTRP00000005444/1-456 ---------- ---------- ---------- ---------- ---------- bmy_11616T0/1-683 MFSLKPPRPT FRSYLLPPPQ TDDKINSEPK IKKLEPVLLP GEIVVNEVNF BACU001810/1-651 MFSLKPPRPT FRSYLLPPPQ TDDKINSEPK IKKLEPVLLP GEIVVNEVNF 51 100 ENSP00000402537/1-777 VRKCIATDTS QYDLWGKLIC SNFKISFITD DPMPLQKFHY RNLLLGEHDV ENSBTAP00000019182/1-764 VRKCIASDTS QYDLWGKLIC SNFKISFITD DPMPLQKFHY RNLLLGEHDV ENSTTRP00000005444/1-456 ---------- ---------- ---------- --MPLQKFHY RNLLLGEHDV bmy_11616T0/1-683 VRKCIASDTS QYDLWGKLIC SNFKISFITD NPMPLQKFHY RNLLLGEHDV BACU001810/1-651 VRKCIASDTS QYDLWGKLIC SNFRISFITD NPMPLQKFHY RNLLLGEHDV 101 150 ENSP00000402537/1-777 PLTCIEQIVT VNDHKRKQKV LGPNQKLKFN PTELIIYCKD FRIVRFRFDE ENSBTAP00000019182/1-764 PLTCIEQIVT LNDHKRKQKV LGPNQKLKFN PTELIIYCKD FRIVRFRFDE ENSTTRP00000005444/1-456 PLTCIEQIVT VNDHKRKQKV LGPNQKLKFN PTELIIYCKD FRIVRFRFDE bmy_11616T0/1-683 PLTCIEQIVT VNDHKRKQKV LGPNQKLKFN PTELIIYCKD FRIVRFRFDE BACU001810/1-651 PLTCIEQIVT VNDHKRKQKV LGPNQKLKFN PTELIIYCKD FRIVRFRFDE 151 200 ENSP00000402537/1-777 SGPESAKKVC LAIAHYSQPT DLQLLFAFEY VGKKYHNSAN KINGIPSGDG ENSBTAP00000019182/1-764 SGPESAKKVC LAIAHYSQPT DLQLLFAFEY VGKKYHNSAS KANGAPL--- ENSTTRP00000005444/1-456 SGPESAKKVC LAIAHYSQPT DLQLLFAFEY VGKKYHNSAS KANGIPS--- bmy_11616T0/1-683 SGPESAKKVI L--------- -LSFIM---- --------AS KANGIPS--- BACU001810/1-651 SGPESAKK-- ---------- ---------- ---------- ---------- 201 250 ENSP00000402537/1-777 GGGGGGGNGA GGGSSQKTPL FETYSDWDRE IKRTGASGWR VCSINEGYMI ENSBTAP00000019182/1-764 GAGGGG---- ----SQKTPL FETYSDWDRE VKRTGASGWR VCSINEGYMI ENSTTRP00000005444/1-456 GGGGGGGIGV GGGSSQKTPL FETYSDWDRE VKRTGASGWR VCSINEGYMI bmy_11616T0/1-683 GGGGGGGIGA GGGSSQKTPL FETYSDWDRE VKRTGASGWR VCSINEGYMI BACU001810/1-651 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000402537/1-777 STCLPEYIVV PSSLADQDLK IFSHSFVGRR MPLWCWSHSN GSALVRMALI ENSBTAP00000019182/1-764 STCLPEYFVV PSSLADQDLK VFSHSFVGRR MPFWCWSHSN GSALVRTALI ENSTTRP00000005444/1-456 STCLPEYFVV PSSLADQDLK IFSHSFVGRR MPFWCWSHSN GSALVRTALI bmy_11616T0/1-683 STCLPEYFVV PSSLADQDLK IFSHSFVGRR MPFWCWSHSN GSALVRTALI BACU001810/1-651 ---------- ---------- ---------- --FWCWSHSN GTALVRTALI 301 350 ENSP00000402537/1-777 KDVLQQRKID QRICNAITKS HPQRSDVYKS DLDKTLPNIQ EVQAAFVKLK ENSBTAP00000019182/1-764 RDVLQQRKIE QRICNAITKS HPQRNDVYKS DLDKTLPNIQ DIQVAFVKLK ENSTTRP00000005444/1-456 KDMLQQRKID QRICNAITKS HPQRSDVYKS DLDKTLPNIQ EIQAAFVKLK bmy_11616T0/1-683 KDVLQQRKID Q--------- ---------- ---------- ---------- BACU001810/1-651 KDVLQQRKID QRICNAITKS HPQRSDVYKS DLDKTLPNIQ EIQAAFVKLK 351 400 ENSP00000402537/1-777 QLCVNEPFEE TEEKWLSSLE NTRWLEYVRA FLKHSAELVY MLESKHLSVV ENSBTAP00000019182/1-764 QLCVNEPFEE TEEKWLSSLE NTRWLEYVRA FLKHAAELVY VLESKRLSVV ENSTTRP00000005444/1-456 QLCVNEPFEE TEEKWLSSLE NTRWLEYVRA FLKHSAELVY MLESKRLSVV bmy_11616T0/1-683 ---------- ---------- --------RA FLKHSAELVY MLESKRLSVV BACU001810/1-651 QLCVNEPFEE TEEKWLSSLE NTRWLEYVRA FLKHSAELVY MLESKRLSVV 401 450 ENSP00000402537/1-777 LQEEEGRDLS CCVASLVQVM LDPYFRTITG FQSLIQKEWV MAGYQFLDRC ENSBTAP00000019182/1-764 LQEEEGRDLS CIIASLVQVM LDPYFRTITG FQSLIQKEWV MAGYPFLDRC ENSTTRP00000005444/1-456 LQEEEGRDLS CIVASLVQVM LDPYFRTITG FQSLIQKEWV MAGYPFLDRC bmy_11616T0/1-683 LQEEEGRDLS CIVASLVQVM LDPYFRTITG FQSLIQKEWV MAGYPFLDRC BACU001810/1-651 LQEEEGRDLS CIVASLVQVM LDPYFRTITG FQSLIQKEWV MAGYPFLDRC 451 500 ENSP00000402537/1-777 NHLKRSEKES PLFLLFLDAT WQLLEQYPAA FEFSETYLAV LYDSTRISLF ENSBTAP00000019182/1-764 NHLKRSEKEA PVFLLFLDTT WQLLEQCPAA FEFSETYLAV LHDSTRVALF ENSTTRP00000005444/1-456 NHLKRSEKEA PVFLLFLDAT WQLQEQCPAA FEFSETYLAV LHDSTRVALF bmy_11616T0/1-683 NHLKRSEKEA PVFLLFLDAT WQLQEQCPAA FEFSETYLAV LHDSTRVALF BACU001810/1-651 NHLKRSEKEA PVFLLFLDAT WQLQEQCPAA FEFSETYLAV LHDSTRVALF 501 550 ENSP00000402537/1-777 GTFLFNSPHQ RVKQSTEFAI SKNIQLGDEK GLKFPSVWDW SLQFTAKDRT ENSBTAP00000019182/1-764 GTFLFNSPHQ RVQQSTEFAI SKNIQLGDEK GLKFPSVWDW SLQFTPKDRT ENSTTRP00000005444/1-456 GTFLFNSPHQ RVQQSSN--- ---------- ---------- ---------- bmy_11616T0/1-683 GTFLFNSPHQ RVQQSTEFAI SKNIQLGDEK GLKFPSVWDW SLQFTAKDRT BACU001810/1-651 GTFLFNSPHQ RVQQSTEFAI SKNIQLGDEK GLKFPSVWDW SLQFTAKDCT 551 600 ENSP00000402537/1-777 LFHNPFYIGK STPCIQNGSV KSFKRTKKSY SSTLRGMPSA LKNGIISDQE ENSBTAP00000019182/1-764 LFHNPFYIGK STPCVQNGSV KSFKRTKKSY SSTLRGMPAS LKNGIISEEE ENSTTRP00000005444/1-456 ---------- ---------- ---------- ---------- ---------- bmy_11616T0/1-683 LFHNPFYIGK STPCVQNGSV KSFKRTKKSY SSTLRGMPAS LKNGIISDQE BACU001810/1-651 LFHNPFYIGK STPCVQNGSV KSFKRTKKSY SSTLRGMPAS LKNGIISDQE 601 650 ENSP00000402537/1-777 LLPRRNSLIL KPKPDPAQQT DSQNSDTEQY FREWFSKPAN LHGVILPRVS ENSBTAP00000019182/1-764 LRPRRNSLIL QVKPAPLETR DSQDWGAERF FQERASRPAD LHGTILPHLS ENSTTRP00000005444/1-456 ---------- ---------- ---------- ---------- ---------- bmy_11616T0/1-683 LLPRRNSLIL KVKPDPPEQS DSQDRGAEQY FREWFSKPAD LHGVILPLLS BACU001810/1-651 LLPRRNSLIL KVKPDPPEQS DSQDRGAEQY FREWFSKPAD LHGVILPLLS 651 700 ENSP00000402537/1-777 GTHIKLWKLC YFRWVPEAQI SLGGSITAFH KLSLLADEVD VLSRMLRQQR ENSBTAP00000019182/1-764 GAHIKLWKLC YFRWVPEAQI QHGGFITAFH KLSLLADEVD VLSRALRQPR ENSTTRP00000005444/1-456 ----KLYKAL FFFKSP---- ---------- ---------- -VEKNLR--- bmy_11616T0/1-683 GMHIKLWKLC YFRWVPEAQI QHGGFITAFH KVSLLADEVD VLSRALRQPQ BACU001810/1-651 GMHIKLWKLC YFRWVPEAQI QRGGFITAFH KVSLLADEVD VLSRALRQPQ 701 750 ENSP00000402537/1-777 SGPLEACYGE LGQSRMYFNA SGPHHTDTSG TPEFLSSSFP FSPVGNLCRR ENSBTAP00000019182/1-764 GGPMPAPGPE LAPSRLYFCA GGPH--DAPG TPDFLSSSFP FSPVGNLCRR ENSTTRP00000005444/1-456 ---------- -------FLV PIP------- ---------- ---------- bmy_11616T0/1-683 GSPPEAPCPE LVQSRLYFRA GGPH--DAPG TPDFLSSSFP FSPVGNLCRR BACU001810/1-651 GSPPEAPCPE LVQSRLYFRA GGPH--DAPG TPDFLSSSFP FSPVGNLCRR 751 800 ENSP00000402537/1-777 SILGTPLSKF LSGAKIWLST ETLANED ENSBTAP00000019182/1-764 SISGTPLSKF LSGAKIWLST ETLANED ENSTTRP00000005444/1-456 ---------- ---------- ------- bmy_11616T0/1-683 SISGTPLGKF LSGAKIWLST ETLANED BACU001810/1-651 SISGTPLGKF LSGAKIWLST ETLANED