KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:06:48 2014 Check: 00 .. Name: ENSP00000390590/1-711 Len: 714 Check: 7254 Weight: 1.00 Name: ENSBTAP00000019185/1-622 Len: 714 Check: 9830 Weight: 1.00 Name: bmy_05794T0/1-480 Len: 714 Check: 9292 Weight: 1.00 Name: BACU007991/1-694 Len: 714 Check: 647 Weight: 1.00 // 1 50 ENSP00000390590/1-711 MLDGPLFSEG PDSPRELQDE ESGSCLWVQK SKLLVIEVKT ISCHYSRRAP ENSBTAP00000019185/1-622 ---------- ---------- ---------- ---------- ---------- bmy_05794T0/1-480 ---------- ---------- ---------- ---------- ---------- BACU007991/1-694 MLDGQLFSEG PDSPRELQDE ESGSCLWVQK SKLLVIEVKT ISCHYSRRAP 51 100 ENSP00000390590/1-711 SRQPMDFQAS HWARGFQNRT CGPRPGSPQP PPRRPWASRV LQEATNWRAG ENSBTAP00000019185/1-622 ----MDFQAS HWLRGPQSRT CGPRPGSPEP PPRRPWASRV LQEATNWRAG bmy_05794T0/1-480 ---------- ---------- ---------- ---------- ---------- BACU007991/1-694 PRQLMDFQAS HWALGPQSRT CGPRPGSPEP PPRRPWASRV LQEATNWRAG 101 150 ENSP00000390590/1-711 PLAEVRAREQ EKRKAASQER EAKETERKRR KAGGARRSPP GRPRPEPRNA ENSBTAP00000019185/1-622 PPAEARAREQ EKRKAASQER EAKETERKRR KAGGARRSPP GRPRPEPRNA bmy_05794T0/1-480 ---------- ---------- ---------- ---------- ---------- BACU007991/1-694 PPAEARAREQ EKRKAASQER EAKETERKRR KAGGARRSPP GRPRPEPRNA 151 200 ENSP00000390590/1-711 PRVAQLAGLP APLRPERLAP VGRAPRPSAQ PQSDPGSAWA GPWGGRRPGP ENSBTAP00000019185/1-622 LRVAHSAGLP APSRPERLGS VGRPPRPSAQ PQSNPGAAWA GPWGGRRPGP bmy_05794T0/1-480 ---------- ---------- ---------- ---------- ---------- BACU007991/1-694 PRVAQPAGLP ALSRPERLGS VGRPPRPSAQ PQSNPGAAWA GPWGGRRPGP 201 250 ENSP00000390590/1-711 PSYEAHLLLR GSAGTAPRRR WDRPPPYVAP PSYEGPHRTL GTKRGPGNSQ ENSBTAP00000019185/1-622 PSYEAHLLLR GAAGMAPRRR WDRPPPYVAP PSYEGPHRTL GTKRGPEPSQ bmy_05794T0/1-480 ---------- ----MAPRRR WDRPPPYVAP PSYEGPHRTL GTKRGPEPSQ BACU007991/1-694 PSYEAHLLLR GAAGVAPRRR WDRPPPYVAP PSYEGPHRTL GTKRGPEPSQ 251 300 ENSP00000390590/1-711 VPTSSAPAAT PARTDGGRTK KRLDPRIYRD VLGAWGLRQG QGLLGGSPGC ENSBTAP00000019185/1-622 ARSSSTCA-- PTRTEGGCAK KRLDPRIYRD VLGAWGLRQG RGLLGGSPGC bmy_05794T0/1-480 APASSTPA-- PTRTEGGCTK KRLDPRIYRD VLGAWGLRQG RGLLGGSPGC BACU007991/1-694 APTSSTPA-- PTRTEGGCAK KRLDPRIYRD VLGAWGLRQG RGLLGGSPGC 301 350 ENSP00000390590/1-711 GAARARPEPG KGVVEKSLGL -AAADLNSGS DSHPQAKATG SAGTEIAPAG ENSBTAP00000019185/1-622 GTDRPRLESG KGPAEKSLRL -AAAGLKSGS DGHPQAKAAG SPGT--VPAG bmy_05794T0/1-480 GTARPRLESG KGAAERSLRL AAAAGLKSGS DGHPQAKATG NPGTETVPAG BACU007991/1-694 GTARPRLESG KGAAERSLRL AAAAGLKSGS DGHPQAKATG NPGTETVPAG 351 400 ENSP00000390590/1-711 SATAAPCAPH PAPRSRHHLK GSREGKEG-E QIWFPKCWIP SPKKQPPRHS ENSBTAP00000019185/1-622 SATATPSPPR PTPRSRPHPR GSGEGREGRD QTWLPKRWVP SIKKQPPRHS bmy_05794T0/1-480 SAPATPSPPR PAPRSRPHPK GSGEGREGRE QSWLPKCWMP SVKKQPPRHS BACU007991/1-694 SAPATPSPPR PAPRSRPHPK GSGEGREGRE QSWLPKCWMP SVKKQPPRHS 401 450 ENSP00000390590/1-711 QTLPRPWAPG GTGWRESLGL GEGAGPETLE GWKATRRAHT LPRSSQGLSR ENSBTAP00000019185/1-622 QTLPRPWAPG GTGWIESLGH RGEAGPETLE GWKATRRPHT LPRSSRGPAR bmy_05794T0/1-480 QTLPRPWAPG GTGWRESLGH REEAGPETLE GWKATRRPHT LPRSSRGPAR BACU007991/1-694 QTLPRPWAPG GTGWRESLGH REEAGPETLE GWKATRRPHT LPRSSRGPAR 451 500 ENSP00000390590/1-711 GEGVFVIDAT CVVIRSQYVP TPRTQQVQLL PSGVTRVVGD SPSQSKPGKE ENSBTAP00000019185/1-622 GEGVFVIDAT CVVIRSQYVP TPRTQHVQLL PAGVPRLVGN APSQPKPNKE bmy_05794T0/1-480 GEGVFVIDAT CVVIRSQYVP TPRTQHVQLL PAGVPRLVGN APTQLKPNKE BACU007991/1-694 GEGVFVIDAT CVVIRSQYVP TPRTQHVQLL PAGVPRLVGN APTQLKPNKE 501 550 ENSP00000390590/1-711 EGEGATVFPS PCQKRLSSSR LLHQPGGGRG GEAEGGRPGD STLEERTFRI ENSBTAP00000019185/1-622 EGEGAAVLPS PCRKLPLSSR PSLQPSEGRG LEAERGKPAD SSLEERASRI bmy_05794T0/1-480 EGEGAAVLPS PCRKLLLSSR PSHQPGGGRG LEAEGGKSAD SSLEERASRI BACU007991/1-694 EGEGAAVLPS PCRKLLLSSR PSHQPGGGRG LEAEGGKSAD SSLEERASRI 551 600 ENSP00000390590/1-711 LGLPAPEVNL RDAPTQPGSP EHQALGPAAS GAQGRAEGSE -VAVVQRRAG ENSBTAP00000019185/1-622 LGLPVGEVNL QDPPTQPGSP EHSALGPAAS RGARGAEGSE KVASGTRRAG bmy_05794T0/1-480 LGLPVGEVNL QDAPTQPGSP EHSALGAAAS GGARGAEGSE EVAAVPRRAG BACU007991/1-694 LGLPVGEVNL QDAPTQPGSP ERSALGPAAS GGARGAEGSE EVAAVPRRAG 601 650 ENSP00000390590/1-711 RGWARTPGPY AGALREAVSR IRRHTAPDSD TDEAEELSVH SGSSDGSDTE ENSBTAP00000019185/1-622 RGWARAPGPY AGALREAVSR IRRHTAPDSD SDEAAELSVH SSSSDASDTE bmy_05794T0/1-480 RGWARTPGPY AGALREAVSR IRRHTAPDSD SDEAAELSVH SSSSDGSDTE BACU007991/1-694 RGWARTPGPY AGALREAVSR IRRHTAPDSD SDEAAELSVH SSSSDGSDTE 651 700 ENSP00000390590/1-711 APGASWRNER TLPEVGNSSP EEDGKTAELS DSVGEILDVI SQTEEVLFGV ENSBTAP00000019185/1-622 ASGASWRKER TGPPEG---- ---GKTAELS GNAREIES-- ---------- bmy_05794T0/1-480 ASGASWRNER TGPPEG---- ---GKAAELS DNIREILDVI SRTEEVLFGG BACU007991/1-694 ASGASWRNER TGPPEG---- ---GKAAELS DNIREILDVI SRTEEVLFGG 701 750 ENSP00000390590/1-711 RDIRGTQQGN RKRQ ENSBTAP00000019185/1-622 ---------- ---- bmy_05794T0/1-480 EGH------- ---- BACU007991/1-694 EGH------- ----