KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:04 2014 Check: 00 .. Name: ENSP00000280097/1-292 Len: 292 Check: 6821 Weight: 1.00 Name: ENSBTAP00000019196/1-292 Len: 292 Check: 9089 Weight: 1.00 Name: ENSTTRP00000012213/1-292 Len: 292 Check: 669 Weight: 1.00 Name: bmy_16151T0/1-187 Len: 292 Check: 8974 Weight: 1.00 Name: BACU010014/1-292 Len: 292 Check: 331 Weight: 1.00 // 1 50 ENSP00000280097/1-292 MASSMRSLFS DHGKYVESFR RFLNHSTEHQ CMQEFMDKKL PGIIGRIGDT ENSBTAP00000019196/1-292 MASSMRSLFT DHSRYVESFR RFLSNSTEHQ CMQEFMDKKL PGIIARIGDI ENSTTRP00000012213/1-292 MASSMKSLFS DHSRYVESFR RFLNNSTEHQ CMQQFMDEKL PGIIARIGDT bmy_16151T0/1-187 ---------- ------MTF- ---------- ---------- -----RIGDT BACU010014/1-292 MASSMKSLVS DHSRYVESFR RFLDNSTEHQ CMQQFMDEKL PGIIARIGDT 51 100 ENSP00000280097/1-292 KSEIKILSIG GGAGEIDLQI LSKVQAQYPG VCINNEVVEP SAEQIAKYKE ENSBTAP00000019196/1-292 KSEIKILSIG GGAGEIDLQI LSKVQAQYPG VHIINEVVEP SAEQITKYKE ENSTTRP00000012213/1-292 KSEIKILSIG GGAGEIDLHI LSKVQAQYPG VSINTEVVEP STEQISKYKE bmy_16151T0/1-187 KSEIKILSIG GGAGEIDLHI LSKVQAQYPG VSINNEVVEP SAEQITKYKE BACU010014/1-292 KSEIKILSIG GGAGEIDLHI LSKVQAQYPG VSINNEVVEP SAEQITKYKE 101 150 ENSP00000280097/1-292 LVAKTSNLEN VKFAWHKETS SEYQSRMLEK KELQKWDFIH MIQMLYYVKD ENSBTAP00000019196/1-292 LVAKTSNLEN IKFAWHKETS SEYQNRMMEK KELQRWDFIH MIQMLYYVKD ENSTTRP00000012213/1-292 LVAKTSNLEN IKFTWHKETS SEYQNRMMEK KELQKWDFIH MIQMLYYVKD bmy_16151T0/1-187 LVAKTSNLEN IKFTWHKETS SEYQNRMMEK KELQKWDFIH MI-------- BACU010014/1-292 LVAKTSNLEN IKFTWHKETS SEYQNRMMEK KELQKWDFIH MIQMLYYVKD 151 200 ENSP00000280097/1-292 IPATLKFFHS LLGTNAKMLI IVVSGSSGWD KLWKKYGSRF PQDDLCQYIT ENSBTAP00000019196/1-292 IPATLKFFHS LLATNAKILI IIVSGASSWQ KLWEKYGSRL PRNDLCQYVT ENSTTRP00000012213/1-292 IPGTLKFFHS LLATGAKILI TLVSGTSGWD KLWKKYGSHL PRDDLCQCVT bmy_16151T0/1-187 ---------- ---------- ---------- ---------- ---------- BACU010014/1-292 IPATLKFFHS LLATSAKILI TVVSGTSSWN KLWKKYGSHL HRDELCQYVT 201 250 ENSP00000280097/1-292 SDDLTQMLDN LGLKYECYDL LSTMDISDCF IDGNENGDLL WDFLTETCNF ENSBTAP00000019196/1-292 SSDLTQMLDK LGIKYEYYDL LSTMDISDCF IDGNENGDLL WDFLTETCNF ENSTTRP00000012213/1-292 SSDLMQMLDK LGIKYECYDL LSTMDISDCF IDGNENGDLL WDFLTETWNF bmy_16151T0/1-187 -----QMLDK FGIKYECYDL PSTMDISDCF IDGNENGDLL WDFLTETCNF BACU010014/1-292 SSDLMQMLDK MGIKYECYDL LSTIDISDCF IDGNENGDLL WDFLTETCNF 251 300 ENSP00000280097/1-292 NATAPPDLRA ELGKDLQEPE FSAKKEGKVL FNNTLSFIVI EA ENSBTAP00000019196/1-292 NTTAPPDLKA EIMKDLQKPE FSIKKEGKVL FNNSLSFIVV EA ENSTTRP00000012213/1-292 STTAPPDLKA EIMKDLQEPE FSVKKEGKVL FNNSLSFIVA EA bmy_16151T0/1-187 STTAPPDLKA EIMKDLQEPX FSVKKEGKVL FNNSLSFIVV EA BACU010014/1-292 STTAPPDLKA EIMKDLQEPE FSVKKEGKVL FNNSLSFIVV EA