KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:07:06 2014 Check: 00 .. Name: ENSP00000333012/1-396 Len: 492 Check: 8853 Weight: 1.00 Name: ENSBTAP00000019202/1-402 Len: 492 Check: 1698 Weight: 1.00 Name: bmy_20333T0/1-488 Len: 492 Check: 7222 Weight: 1.00 Name: ENSTTRP00000010486/1-344 Len: 492 Check: 5934 Weight: 1.00 // 1 50 ENSP00000333012/1-396 MSVAFASARP RGKGEVTQQT IQKMLDENHH LIQCILEYQS KG-------- ENSBTAP00000019202/1-402 MSVAFASARP RGKGEVTQQT IQKMLDENHH LIQCILDYQS KG-------- bmy_20333T0/1-488 ---MTSSSSS GPHGCACESL EVEHVCQTQS IVPPALPGEG LGCRAGQGSL ENSTTRP00000010486/1-344 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000333012/1-396 ---KTAECTQ YQQILHRNLV YLATIADSNQ NMQSLLPAPP TQNMNLGPGA ENSBTAP00000019202/1-402 ---KTAECTQ YQQILHRNLV YLATIADSNQ NMQSLLPAPP TQSMTLGPGG bmy_20333T0/1-488 LPLSRALACR YQQILHRNLV YLATIADSNQ NMQSLLPAPP TQSLALGPGG ENSTTRP00000010486/1-344 ---------- YQQILHRNLV YLATIADSNQ NMQSLLPAPP TQSLALGPGG 101 150 ENSP00000333012/1-396 LTQSGSSQGL HSQGSLSDAI STGLPPSSLL QGQIGNGPSH VSMQQTAPNT ENSBTAP00000019202/1-402 LSQSGSAQGL HSQGSLSDAI GAGLPPSSLM QAQIGNGPNH VSLQQTAQST bmy_20333T0/1-488 LSQSGSGQGL HSQGSLSDAI GAGLPPSSLM QAQIGNGPNH VTLQQTVQST ENSTTRP00000010486/1-344 LSQSGSGQGL HSQGSLSDAI SAGLPPPSLM QAQIGNGPNH VTLQQTAQST 151 200 ENSP00000333012/1-396 LPTTSMSI-- ----SGPGYS HAGPASQGVP MQGQGTIGNY VSRTNINMQS ENSBTAP00000019202/1-402 LPTTSMSMSG SGHGSGPGYS HSGPASQSVP LQSQGAISNY VSRANINMQS bmy_20333T0/1-488 LPTTSMSMSG SGHGSGPGYS HSGPASQSIP LQGQGAISSY VSRANINMQS ENSTTRP00000010486/1-344 LPTTSMSI-- ----SGPGYS HSGPASQSIP LQGQGAISSY VSRANINMQS 201 250 ENSP00000333012/1-396 NPVSMMQQQA ATSHYSSAQG GSQHYQGQSS IAMMGQGSQG SSMMGQRPMA ENSBTAP00000019202/1-402 NPVSMMHQQA ASSHYSAAQG GSQHYQGQ-S MAMMGQSGQG GGVMGQRPMA bmy_20333T0/1-488 NPVSMMHQQA ASSHYSAAQG GSQHYQGQ-S MAMMGQSGQA GSMMGQRPMA ENSTTRP00000010486/1-344 NPVSMMHQQA ASSHYSAAQG GSQHYQGQ-S MAMMGQSGQA GSMMGQRPMA 251 300 ENSP00000333012/1-396 PYRPSQQGSS QQYLGQEEYY -GEQYSHSQG AAEPMGQQYY PDGHGDYAYQ ENSBTAP00000019202/1-402 PYRPSQQGSS QQYLGQEEYY GGEQYGHGQA ASEPMSQQYY PDGHGDYAYQ bmy_20333T0/1-488 PYRPSQQGSS QQYLGQEEYY GGEQYGHGQA ASEPMSQQYY PDGHGDYAYQ ENSTTRP00000010486/1-344 PYRPSQQGSS QQYLGQEEYY GGEQYGHGQA ASEPMSQQYY PDGHGDYAYQ 301 350 ENSP00000333012/1-396 QSSYTEQSYD RSFEESTQHY YEGGNSQYSQ QQAGYQQGAA QQQTYSQQQY ENSBTAP00000019202/1-402 PASYTDQSYD RSFEDSTQHY YEGGNSQYSQ QQTGYQQGTA QQQTYSQQQY bmy_20333T0/1-488 PASYTEQSYD RSFEESTQHY YEGGNSQYSQ QQAGYQQGTA QQQTYSQQQY ENSTTRP00000010486/1-344 PASYTEQSYD RSFEESTQHY YEGGNSQYSQ QQAGYQQGTA QQQTYSQQQY 351 400 ENSP00000333012/1-396 PSQQSYPGQQ QGYGSAQGAP SQYPGYQQGQ GQQYGSYRAP QTAPSAQQQR ENSBTAP00000019202/1-402 PNQQSYPGQQ QGYGPAQGAP SQYSSYQQGQ GQQYGSYRAS QTGPSTQQQR bmy_20333T0/1-488 PNQQSYPGQQ QGYGPAQGAP SQYSSYQQGQ GQQYGSYRAS QTGPSAQQQR ENSTTRP00000010486/1-344 P-QQSYP--Q QGYGPAQGAP SQYSSYQQGQ GQQYGSYRAS QTGPSAQQQR 401 450 ENSP00000333012/1-396 PYGYEQGQYG NYQQ------ ---------- ---------- ---------- ENSBTAP00000019202/1-402 PYGYEQGQYG NYQQ------ ---------- ---------- ---------- bmy_20333T0/1-488 PYGYEQASLL RVSRLAAPVA STEITSSKGQ TFLWSLAAAC LSGMDRPVTV ENSTTRP00000010486/1-344 PYGYEQGQYG NYQQ------ ---------- ---------- ---------- 451 500 ENSP00000333012/1-396 ---------- ---------- ---------- ---------- -- ENSBTAP00000019202/1-402 ---------- ---------- ---------- ---------- -- bmy_20333T0/1-488 LMSCDLRAAP SPHAVSACEA CTFHVGQDAE RAPLVQDSAL MV ENSTTRP00000010486/1-344 ---------- ---------- ---------- ---------- --