KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:07:06 2014 Check: 00 .. Name: ENSTTRP00000000662/1-258 Len: 308 Check: 7310 Weight: 1.00 Name: bmy_13478T0/1-287 Len: 308 Check: 7464 Weight: 1.00 Name: ENSP00000044462/1-261 Len: 308 Check: 5953 Weight: 1.00 Name: ENSBTAP00000019203/1-261 Len: 308 Check: 5953 Weight: 1.00 // 1 50 ENSTTRP00000000662/1-258 ---------- ---------- ---------- ---------- -------MSR bmy_13478T0/1-287 MMTLHRLLGD GPAAGLTPDG RRIIIKFRKH GVGLLKVGRN HLYVFPLQSR ENSP00000044462/1-261 ---------- ---------- ---------- ---------- -------MSR ENSBTAP00000019203/1-261 ---------- ---------- ---------- ---------- -------MSR 51 100 ENSTTRP00000000662/1-258 RYDSRTTIFS PEGRLYQVEY AMQA--RHAT C-AILANDGV LLAAXXXXXX bmy_13478T0/1-287 RYDSRTTIFS PEGRLYQVEY AMEAIGHAGT CLGILANDGV LLAAERRNIH ENSP00000044462/1-261 RYDSRTTIFS PEGRLYQVEY AMEAIGHAGT CLGILANDGV LLAAERRNIH ENSBTAP00000019203/1-261 RYDSRTTIFS PEGRLYQVEY AMEAIGHAGT CLGILANDGV LLAAERRNIH 101 150 ENSTTRP00000000662/1-258 XXXXXXXXXX XXXXXXXDMA CSVAGITSDA NVLTNELRLI AQRYLLQYQE bmy_13478T0/1-287 KLLDEVFFSE KIYKLNEDMA CSVAGITSDA NVLTNELRLI AQRYLLQYQE ENSP00000044462/1-261 KLLDEVFFSE KIYKLNEDMA CSVAGITSDA NVLTNELRLI AQRYLLQYQE ENSBTAP00000019203/1-261 KLLDEVFFSE KIYKLNEDMA CSVAGITSDA NVLTNELRLI AQRYLLQYQE 151 200 ENSTTRP00000000662/1-258 PIPCEQLVTA LCDIKQAYTQ FGGKRPFGVS LLYIGWDKHY GFQLYQSDPS bmy_13478T0/1-287 PIPCEQLVTA LCDIKQAYTQ FGGKRPFGVS LLYIGWDKHY GFQLYQT--- ENSP00000044462/1-261 PIPCEQLVTA LCDIKQAYTQ FGGKRPFGVS LLYIGWDKHY GFQLYQSDPS ENSBTAP00000019203/1-261 PIPCEQLVTA LCDIKQAYTQ FGGKRPFGVS LLYIGWDKHY GFQLYQSDPS 201 250 ENSTTRP00000000662/1-258 GNYGGWKATC IGNNSAAAVS MLKQDYKEGE MTLKSALALA IKVLNKTMDV bmy_13478T0/1-287 ---------- --------VS MLKQDYKEGE MTLKSALALA IKVLNKTMDV ENSP00000044462/1-261 GNYGGWKATC IGNNSAAAVS MLKQDYKEGE MTLKSALALA IKVLNKTMDV ENSBTAP00000019203/1-261 GNYGGWKATC IGNNSAAAVS MLKQDYKEGE MTLKSALALA IKVLNKTMDV 251 300 ENSTTRP00000000662/1-258 SKLSAEKVEI ATLTRENGKT VIRVLKQKEV EQLIKKHEEE EAKAEREKKE bmy_13478T0/1-287 SKLSAEKVEI ATLTRENGKT VIRVLKQKEV EQLIKKHEEE EAKAEREKKE ENSP00000044462/1-261 SKLSAEKVEI ATLTRENGKT VIRVLKQKEV EQLIKKHEEE EAKAEREKKE ENSBTAP00000019203/1-261 SKLSAEKVEI ATLTRENGKT VIRVLKQKEV EQLIKKHEEE EAKAEREKKE 301 350 ENSTTRP00000000662/1-258 KEQKEKDK bmy_13478T0/1-287 KEQKEKDK ENSP00000044462/1-261 KEQKEKDK ENSBTAP00000019203/1-261 KEQKEKDK