KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:07:06 2014 Check: 00 .. Name: ENSP00000359859/1-406 Len: 487 Check: 9556 Weight: 1.00 Name: ENSBTAP00000019208/1-454 Len: 487 Check: 5529 Weight: 1.00 Name: bmy_20334T0/1-439 Len: 487 Check: 1111 Weight: 1.00 Name: ENSTTRP00000010492/1-406 Len: 487 Check: 7035 Weight: 1.00 // 1 50 ENSP00000359859/1-406 ---------- ---------- ---------- -MAPARCFSA RLRTVFQGVG ENSBTAP00000019208/1-454 ---------- ---------- ---------- -MIPSRLFSA RPQVMLEGVG bmy_20334T0/1-439 MRAGEPCAGG THPGGDPRSR PRKWRAVSSG TMIRSRLFSA RSWPVLEGVG ENSTTRP00000010492/1-406 ---------- ---------- ---------- -MIRSRLSAA RSWPVLEGVG 51 100 ENSP00000359859/1-406 HWALSTWAGL KPSRLLPQRA SPRLLSVGRA DLAKHQELPG KKLLSEKKLK ENSBTAP00000019208/1-454 FWMLAARVVP GPSCLLLLRA SPRLLSVSCA DCTKHQEPPR KQPLSEKKLK bmy_20334T0/1-439 CWTPLARTFP RPGRLLPQLA SPRLLSVSCA DCTKHQEPPR KKLLSEKKLK ENSTTRP00000010492/1-406 CWTPLARVFP RPGRLLPQHA SPRLLSVSCA DCTKHQEPPR KKLLSEKKLK 101 150 ENSP00000359859/1-406 RYFVDYRRVL VCGGNGGAGA SCFHSEPRKE FGGPDGGDGG NGGHVIL--R ENSBTAP00000019208/1-454 QHFVDHRRVL VRGGHGGNGV SCFHSEPRKE FGGPDGGDGG NGGHVVL--R bmy_20334T0/1-439 RHFVDHRRVL VRGGRGGDGV SCFHSEPRKE FGGPDGGDGG YGGHVILRGR ENSTTRP00000010492/1-406 RHFVDHRRVL VRGGRGGDGV SCFHSEPRKE FGGPDGGDGG YGGHVIL--R 151 200 ENSP00000359859/1-406 VDQQVKSLSS VLSRYQGFSG EDGGSKNCFG RSGAVLYIRV PVGTLVKEGG ENSBTAP00000019208/1-454 VDQQVKSLSS VLSRYQGFDG EDGGRKNCFG RNGAVLYIRV PVGTLVKEGN bmy_20334T0/1-439 FDQQVKSLSS VLSQYQGFDG GAGGRKNCFG RNGAVLYIQV PVGTLVKEGN ENSTTRP00000010492/1-406 VDRQVKSLSS VLSQYQGFDG GAGGRKNCFG RSGAVLYIQV PVGTLVKEGN 201 250 ENSP00000359859/1-406 RVVADLSCVG DEYIAALGGA GGKGNRFFLA NNNRAPVTCT PGQPGQQRVL ENSBTAP00000019208/1-454 EVLADLSRPG DEFIAAVGGT GGKGNRFFLA NDNRAPTTCT PGQPGQERVL bmy_20334T0/1-439 EVLADLSHPG DEFIAALGGA GGKGNRFFLA NGNRAPTTCT PGQPGQERVL ENSTTRP00000010492/1-406 EVLADLSHPG DEFIAALGGA GGKGNRFFLA NSNRAPTTCT PGQPGQERVL 251 300 ENSP00000359859/1-406 HLELKTVAHA GMVGFPNAGK SSLLRAISNA RPAVASYPFT TLKPHVGIVH ENSBTAP00000019208/1-454 FLELKTVAHA GLVGFPNAGK SSLLRAISNA RPAVAAYPFT TLNPHVGIVH bmy_20334T0/1-439 FLELKTVAHA GLVGFPNAGK SSLLRAISNA RPTVASYPFT TLNPHVGVVH ENSTTRP00000010492/1-406 FLELKTVAHA GLVGFPNAGK SSLLRAISNA RPTVASYPFT TLNPHVGVVH 301 350 ENSP00000359859/1-406 YEGHLQIAVA DIPGIIRGAH QNRGLGSAFL RHIERCRFLL FVVDLSQPEP ENSBTAP00000019208/1-454 YEDHQQIAVA DIPGIIQGAH QNRGLGLAFL RHIERCPFLL FLVDLSVPEP bmy_20334T0/1-439 CEDHQQIAVA DIPGIVCGAH QNRGLGLAFL RHIERCPFLL FVLDLSVPEP ENSTTRP00000010492/1-406 CEDHQQIAVA DIPGIVRGAH RNRGLGLAFL RHIERCPFLL FVLDLSVPEP 351 400 ENSP00000359859/1-406 WTQVDDLKYE LEMYEKGLSA RPHAIVANKI DLPEAQANLS QLRDHLGQEV ENSBTAP00000019208/1-454 WTQLDDLKYE LEQYDEGLSK RPYTVVANKI DLPQARARLP QLQAHLGQEA bmy_20334T0/1-439 WTQLDDLKYE LEQYRQGLSE RPRAVVANKV DLPQARAQLP QLQARLGREA ENSTTRP00000010492/1-406 WTQLDDLKYE LEQYREGLSE RPHAVVANKV DLPQARAQLP QLQARLGREA 401 450 ENSP00000359859/1-406 IVLS------ -------ALT GE------NL EQLL------ ---------- ENSBTAP00000019208/1-454 IAPAAAVVAE EAAPGRPAAT GDEEGAPGNW EALVQVPSCQ PGTPSQHSPC bmy_20334T0/1-439 IALS------ -------AAT GE------NL EELL------ ---------- ENSTTRP00000010492/1-406 IALS------ -------AAT GE------NL EGLL------ ---------- 451 500 ENSP00000359859/1-406 -----LHLKV LYDAYAEAE- ---LGQGRQP LRW---- ENSBTAP00000019208/1-454 PGTGSLGQRT LLPPPVCLQC LHACLRVSDV LQWAHLC bmy_20334T0/1-439 -----LRLKE LHDDHVAAE- ---LERGRQP LRW---- ENSTTRP00000010492/1-406 -----LHLKE LHDDHVAAE- ---LERGRQP LRW----