KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:07 2014 Check: 00 .. Name: bmy_06376T0/1-208 Len: 316 Check: 7613 Weight: 1.00 Name: BACU019027/1-269 Len: 316 Check: 6108 Weight: 1.00 Name: ENSP00000375726/1-301 Len: 316 Check: 1842 Weight: 1.00 Name: ENSTTRP00000005197/1-301 Len: 316 Check: 8051 Weight: 1.00 Name: ENSBTAP00000019215/1-302 Len: 316 Check: 9345 Weight: 1.00 // 1 50 bmy_06376T0/1-208 MTRHGKNCTA GAVYTYHEKK KDTAASGYGT QNIRLSRDAV KDFDCCCLSL BACU019027/1-269 MTRHGKNCTA GAVYTYHEKK KDTAASGYGT QNIRLSRDAV KDFDCCCLSL ENSP00000375726/1-301 MTRHGKNCTA GAVYTYHEKK KDTAASGYGT QNIRLSRDAV KDFDCCCLSL ENSTTRP00000005197/1-301 MTRHGKNCTA GAVYTYHEKK KDTAASGYGT QNIRLSRDAV KDFDCCCLSL ENSBTAP00000019215/1-302 MTRHGKNCTA GAVYTYHEKK KDTAASGYGT QNIRLSRDAV KDFDCCCLSL 51 100 bmy_06376T0/1-208 QPCHDPVVTP DGYLYEREAI LEYILHQKKE IARQMKMPSS LLPGCPQAYE BACU019027/1-269 QPCHDPVVTP DGYLYEREAI LEYILHQKKE IARQMK---- -------AYE ENSP00000375726/1-301 QPCHDPVVTP DGYLYEREAI LEYILHQKKE IARQMK---- -------AYE ENSTTRP00000005197/1-301 QPCHDPVVTP DGYLYEREAI LEYILHQKKE IARQMK---- -------AYE ENSBTAP00000019215/1-302 QPCHDPVVTP DGYLYEREAI LEYILHQKKE IARQMK---- -------AYE 101 150 bmy_06376T0/1-208 KQRGARREGQ QELQRAAAQD QVRGFLEKEA AIVSRPLNPF TPKAAS-GNC BACU019027/1-269 KQRGVRREEQ QELRRAAAQD QVRGFLEKEA AIVSRPLNPF MPKAAS-GNC ENSP00000375726/1-301 KQRGTRREEQ KELQRAASQD HVRGFLEKES AIVSRPLNPF TAKALS-GTS ENSTTRP00000005197/1-301 KQRGARREEQ KGLRRAAAQD QVRGFLEKEA AIVSRPLNPF TPKAAS-GDC ENSBTAP00000019215/1-302 KQRGARREEQ KELQRAAAQD HVRGFLEKEA AIVSRPLNPF TPKAASAGNG 151 200 bmy_06376T0/1-208 PGEREVDMQV GGGPAG---- --------PG ASLGAASEPL SPPQ------ BACU019027/1-269 PDDARPGSSA G--PTGKDKD KALPSFWIPS LTPEAKATKL EKPVS----- ENSP00000375726/1-301 PDDVQPGPSV G--PPSKDKD KVLPSFWIPS LTPEAKATKL EKPSRTVTCP ENSTTRP00000005197/1-301 PDDARPGSSA G--PTGKDKD KALPSFWIPS LTPEAKATKL EKPSRIVTCP ENSBTAP00000019215/1-302 PDDAQPGSSA G--PAGKDKD KALPSFWIPS LTPEAKATKL EKPSRIVTCP 201 250 bmy_06376T0/1-208 ------MMPD PGPAR----- ---------- ---------- --------AP BACU019027/1-269 ------RLPQ QAP------- ---------- -----VCAHF ARESQGPEGP ENSP00000375726/1-301 MSGKPLRMSD LTPVHFTPLD SSVDRVGLIT RSERYVCA-V TRDSLSNATP ENSTTRP00000005197/1-301 MSGKPLRMSD LTPVRFTPLD SSVDRVGLIT RSERYVCA-V TRDSLSNATP ENSBTAP00000019215/1-302 MSGKPLRMSD LTPVRFTPLD SSVDRVGLIT RSERYVCA-V TRDSLSNATP 251 300 bmy_06376T0/1-208 QARTR----- --TKCC---- ------PASG SRR------- ---------- BACU019027/1-269 LPRLTGTGAV VTVECVEKLI RKDMVDPVTG EKLTDRDIIV LQRGGTGFAG ENSP00000375726/1-301 CAVLRPSGAV VTLECVEKLI RKDMVDPVTG DKLTDRDIIV LQRGGTGFAG ENSTTRP00000005197/1-301 CAVLRPSGAV VTVECVEKLI RKDMVDPVTG EKLTDRDIIV LQRGGTGFAG ENSBTAP00000019215/1-302 CAVLRPSGAV VTLECVEKLI RKDMVDPVTG EKLTDRDIIV LQRGGTGFAG 301 350 bmy_06376T0/1-208 ---------- ------ BACU019027/1-269 SGVKLQAEKS RPVMQA ENSP00000375726/1-301 SGVKLQAEKS RPVMQA ENSTTRP00000005197/1-301 SGVKLQAEKS RPVMQA ENSBTAP00000019215/1-302 SGVKLQAEKS RPVMQA