KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:12 2014 Check: 00 .. Name: ENSP00000223095/1-402 Len: 606 Check: 6377 Weight: 1.00 Name: ENSBTAP00000019232/1-402 Len: 606 Check: 6752 Weight: 1.00 Name: BACU012060/1-605 Len: 606 Check: 3561 Weight: 1.00 Name: bmy_12073T0/1-449 Len: 606 Check: 3670 Weight: 1.00 Name: ENSTTRP00000000717/1-402 Len: 606 Check: 7098 Weight: 1.00 // 1 50 ENSP00000223095/1-402 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019232/1-402 ---------- ---------- ---------- ---------- ---------- BACU012060/1-605 MERQRKSPPR IQASQQDRHQ LPSCAPSQLR QPGVTQTNRH AEKACFHMAR bmy_12073T0/1-449 -----HLAEG PRALSKEPHP LPSRGIATTI NTXSPNSSRN KLPVTRHLEN ENSTTRP00000000717/1-402 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000223095/1-402 --MQMSPALT CLVLGLALVF GEGSAVHHPP SYVAHLASDF GVRVFQQVAQ ENSBTAP00000019232/1-402 --MRMSPVFA CLALGLALIF GEGSASYQPQ SAAASLATDF GVKVFQQVVR BACU012060/1-605 -KMQMSPVFA CLALGLALIF GEGSASYHYQ SPAAHLATDF GVKVFQQVVQ bmy_12073T0/1-449 FRMQMSPVFA CLALGLALIS GEGSASYHYQ SPAAHLATDF GVKVFQQVVQ ENSTTRP00000000717/1-402 --MPMSPVFA CLALGVALIF GEGSASYHHQ SPAAHLAADF GVKVFQQVVQ 101 150 ENSP00000223095/1-402 ASKDRNVVFS PYGVASVLAM LQLTTGGETQ QQIQAAMGFK IDDKGMAPAL ENSBTAP00000019232/1-402 ASKDRNVVFS PYGVASVLAM LQLTTGGETR QQIQEAMQFK IEEKGMAPAF BACU012060/1-605 ASKDLNVVFS PYGVASVMAM LQLTTRGETQ RQIQEAMQFK IDEKGMAPAL bmy_12073T0/1-449 ASKDLNVVFS PYGVASVMAM LQLTTGGETQ RQIQEAMQFK TDEKGMAPAL ENSTTRP00000000717/1-402 ASKDLNVVFS PYGVASVMAM LQLTTGGETQ QQIQEAMQFK IDEKGMAPAL 151 200 ENSP00000223095/1-402 RHLYKELMGP WNKDEISTTD AIFVQRDLKL VQGFMPHFFR LFRSTVKQVD ENSBTAP00000019232/1-402 HRLYKELMGP WNKDEISTAD AIFVQRDLEL VHGFMPNFFR LFRTTVKQVD BACU012060/1-605 RRLYKELMGP WNKDEISTAD AIFVQRDLKL VQGFMPHFFR LFRTTVKQVD bmy_12073T0/1-449 RRLYKELMGP WNKDEISTAD AIFVQRDLKL VQGFMPHFFR LFRTTVKQVD ENSTTRP00000000717/1-402 HQLYKELMGP WNKDEISTAD AIFVQRDLKL VQGFMPHFFR LFRTTVKQVD 201 250 ENSP00000223095/1-402 FSEVERARFI INDWVKTHTK GMISNLLGKG AVDQLTRLVL VNALYFNGQW ENSBTAP00000019232/1-402 FSEVERARFI VNDWVKRHTK GMISDLLGEG AVDQLTRLVL VNALYFNGQW BACU012060/1-605 FSEIERARFI VNDWVKRHTK GMISDLLGEG AVDQLTRLVL VNALYFNGQW bmy_12073T0/1-449 FSEIERARFI VNDWVKRHTK GMISDLLGEG AVDQLTRLVL VNALYFNGQW ENSTTRP00000000717/1-402 FSETERARFI VNDWVKRHTK GMISDLLGEG AVDQLTRLVL VNALYFNGQW 251 300 ENSP00000223095/1-402 KTPFPDSSTH RRLFHKSDGS TVSVPMMAQT NKFNYTEFTT PDGHYYDILE ENSBTAP00000019232/1-402 KMPFPESNTH HRLFHKSDGS TISVPMMAQT NKFNYTEFTT PDGRYYDILE BACU012060/1-605 KMPFLESSTH HRLFHKSDGS TVSVPMMAQT NKFNYTEFTT PDGHYYDILE bmy_12073T0/1-449 KMPFLESSTH HRLFHKSDGS TVSVPMMAQT NKFNYTEFTT PDGHYYDILE ENSTTRP00000000717/1-402 KMPFLESSTH HRLFHKSDGS TVSVPMMAQT NKFNYTEFTT PDGHYYDILE 301 350 ENSP00000223095/1-402 LPYHGDTLSM FIAAPYEKEV PLSALTNILS AQLISHWKGN MTRLPRLLVL ENSBTAP00000019232/1-402 LPYHGNTLSM LIAAPYEKEV PLSALTSILD AELISQWKGN MTRLTRLLVL BACU012060/1-605 LPYHGDTLSM FIAAPYEKEV PLSALTNILD AQLISQWRGN MTRLTRLLVL bmy_12073T0/1-449 LPYHGNTLSM FIAAPYEKEV PLSALTSILD AQLISQWRGN MTRLTRLLVL ENSTTRP00000000717/1-402 LPYHGNTLSM FIAAPYEKEV PLSALTSILD AQLISQWRGN MTTLTRLLVL 351 400 ENSP00000223095/1-402 PKFSLETEVD LRKPLENLGM TDMFRQFQAD FTSLSDQEPL HVAQALQKVK ENSBTAP00000019232/1-402 PKFSLETEID LRRPLENLGM TDMFRPSQAD FSSFSDQEFL YVSQALQKVK BACU012060/1-605 PKFSLESEVD LRRPLENLGM IDMFRPNQAD FSRLSDQELL YVSQALQKVK bmy_12073T0/1-449 PKFSLESEVD LRRPLENLGM TDMFRPNQAD FSRLSDQELL YVSQALQKVK ENSTTRP00000000717/1-402 PKFSLESEID LRRPLENLGM TDMFRPNQAD FSRLSDQELL YVSQALQKVK 401 450 ENSP00000223095/1-402 IEVNESGTVA SSSTAVIVSA RMAPEEIIMD RPFLFVVRHN PTG-----TV ENSBTAP00000019232/1-402 IEVNESGTLA SSSTALVVSA RMAPEEIIMD RPFLFVVRHN PTG-----TV BACU012060/1-605 IEVNESGTVA SSSTALIVSA RMAPEEIIMD RPFLFVVRHN PTDILRTKTM bmy_12073T0/1-449 IQVNESGTVA SSSTALIVSA RMAPEEIIMD RPFLFVVRHN PTG-----TV ENSTTRP00000000717/1-402 IEVNESGTVA SSSTALTVSA RMAPEEIIMD RPFLFVVRHN PTG-----TV 451 500 ENSP00000223095/1-402 LFM------- ---------- ---------- ---------- ---------- ENSBTAP00000019232/1-402 LFM------- ---------- ---------- ---------- ---------- BACU012060/1-605 RFMLLFSRQG KLRLQKWYLA TSDKERKKMV RELMQVVLAR KPKMCSFLEW bmy_12073T0/1-449 LFM------- ---------- ---------- ---------- ---------- ENSTTRP00000000717/1-402 LFM------- ---------- ---------- ---------- ---------- 501 550 ENSP00000223095/1-402 ---------- ---------- ---------- ---------- ---GQVMEP- ENSBTAP00000019232/1-402 ---------- ---------- ---------- ---------- ---GQVMEP- BACU012060/1-605 RDLKVVYKRY ASLYFCCAIE GQDNELITLE LIHRYVELLD KYFGSVCELD bmy_12073T0/1-449 ---------- ---------- ---------- ---------- ---GQVMEP- ENSTTRP00000000717/1-402 ---------- ---------- ---------- ---------- ---GQVMEP- 551 600 ENSP00000223095/1-402 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019232/1-402 ---------- ---------- ---------- ---------- ---------- BACU012060/1-605 IIFNFEKAYF ILDEFLMGGD VQDTSKKSVL KAIEQADLLQ EEDESPRSVL bmy_12073T0/1-449 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000717/1-402 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000223095/1-402 ------ ENSBTAP00000019232/1-402 ------ BACU012060/1-605 EEMGLA bmy_12073T0/1-449 ------ ENSTTRP00000000717/1-402 ------