KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:13 2014 Check: 00 .. Name: ENSTTRP00000014360/1-302 Len: 337 Check: 1468 Weight: 1.00 Name: ENSP00000358470/1-282 Len: 337 Check: 2548 Weight: 1.00 Name: ENSBTAP00000019233/1-285 Len: 337 Check: 6896 Weight: 1.00 Name: bmy_10606T0/1-319 Len: 337 Check: 2362 Weight: 1.00 Name: BACU002671/1-236 Len: 337 Check: 1230 Weight: 1.00 // 1 50 ENSTTRP00000014360/1-302 ---------- ---AVSHQGR QRQLHSASIL REGPVPPAMA SRG------- ENSP00000358470/1-282 ---------- ---------- ---------- --------MA SLG------- ENSBTAP00000019233/1-285 ---------- ---------- MELLRSLS-- ---------- ---------- bmy_10606T0/1-319 ALEVEWFPKG IPAQNKPQGD FCLDRELADR RQGSASQRAK HVGLGERAYV BACU002671/1-236 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014360/1-302 ---------- QVIFWSIIST TIILAGAIAL IIGFGISXXX XXXXXXXXXX ENSP00000358470/1-282 ---------- QILFWSIISI IIILAGAIAL IIGFGISGRH SITVTTVASA ENSBTAP00000019233/1-285 --------KA P--TSSIISI IIILAGAIVF IIGFGISGRR SITVTTLTSA bmy_10606T0/1-319 EEKVETLYVT PLTNDSIISI IIILAGAIAL IIGFGISGRH SITVTTLTSA BACU002671/1-236 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000014360/1-302 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358470/1-282 GNIGEDGILS CTFEPDIKLS DIVIQWLKEG VLGLVHEFKE GKDELSEQDE ENSBTAP00000019233/1-285 GNIGEDGILS CTFEPDIKLA DIVIQWLKEG VMGLVHEFKE GKDVLSDQDE bmy_10606T0/1-319 GNIGEDGILS CTFEPDIKLS DIVIQWLKEG VMSLVHEFKE GKDDLSDQDE BACU002671/1-236 GNIGEDGILS CTFEPDIKLS DIVIQWLKEG VMGLVHEFKE GKDDLSDQDE 151 200 ENSTTRP00000014360/1-302 XXXXXXXXXX XXXXXXXXXX XXXXXXLTDA STYKCYIITS K---NANLEY ENSP00000358470/1-282 MFRGRTAVFA DQVIVGNASL RLKNVQLTDA GTYKCYIITS KGKGNANLEY ENSBTAP00000019233/1-285 MFRGRTAVFS DQVIVGNASL RLKNVQLTDA GTYKCYIITS KGKGNANLEY bmy_10606T0/1-319 MFRGWTAVFA DQVIVGSASL RLKNMQLTDA GTYKCYIITS KGKGNANLEY BACU002671/1-236 MFRGRTAVFA DQVIVGNASL RLKNVQLTDA GTYKCYIITS KGKGNANLEY 201 250 ENSTTRP00000014360/1-302 KTGAFSIPEV NVDCNATSES LRCEAP-WFP QPTVVWASQV DWGANFSEVS ENSP00000358470/1-282 KTGAFSMPEV NVDYNASSET LRCEAPRWFP QPTVVWASQV DQGANFSEVS ENSBTAP00000019233/1-285 KTGAFSIPEV NVDYNASSES LRCEAPRWFP QPTVVWASQV DQGANFSEVS bmy_10606T0/1-319 KTGAFSIPEV NVDCNATSES LR-------- ---------F DQGANFSEVS BACU002671/1-236 KTGAFSIPEV NMECNATSES LRCEAPRWFR QPTVVWASQV DQGANFSEVS 251 300 ENSTTRP00000014360/1-302 DTSFELNSKN VTIKVVSVLY NVTINNTYSC MIENNIAKAT GDIKVTDSEI ENSP00000358470/1-282 NTSFELNSEN VTMKVVSVLY NVTINNTYSC MIENDIAKAT GDIKVTESEI ENSBTAP00000019233/1-285 NTSFELNSEN VTMKVVSILY NVTINNTYSC MIENNIAKAT GDIKVTDSEI bmy_10606T0/1-319 DTSFELNSEN VTMKVVSVLY NVTINNTYSC MIENNIAKAT GDIKVTDSEI BACU002671/1-236 NTSFELNSEN VTMKVVSILY NVTINNTYSC MIENNIAKAT GDIKVTDSEI 301 350 ENSTTRP00000014360/1-302 KRQSHLQLLN SKASLCVS-S VAITWVLLPL CPYLMLK ENSP00000358470/1-282 KRRSHLQLLN SKASLCVSSF FAISWALLPL SPYLMLK ENSBTAP00000019233/1-285 KRRSHLQLLN SKASLRVSAS SAIDWVLLPL CFYLTLK bmy_10606T0/1-319 KRRSHLQLLN SKASLCVS-S VAISWVLLPL CPYLMLK BACU002671/1-236 KRRSHLQLLN SKASLCVS-S VAISWVLLPL CPYLMLK