KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:14 2014 Check: 00 .. Name: ENSP00000380174/1-852 Len: 854 Check: 9941 Weight: 1.00 Name: ENSBTAP00000019251/1-850 Len: 854 Check: 4531 Weight: 1.00 Name: ENSTTRP00000015390/1-849 Len: 854 Check: 8912 Weight: 1.00 Name: bmy_10934T0/1-715 Len: 854 Check: 9218 Weight: 1.00 Name: BACU004929/1-850 Len: 854 Check: 7339 Weight: 1.00 // 1 50 ENSP00000380174/1-852 MMAKSALREN GTNSETFRQR FRRFHYQEVA GPREAFSQLW ELCCRWLRPE ENSBTAP00000019251/1-850 TMAKPTLRGN GSNSEAFRQR FRKFHYQEVA GPREAFSQLW ELCCRWLRPE ENSTTRP00000015390/1-849 TMAKPTLRGS GTNSETFRQR FRRFHYQEVA GPREAFSQLW ELCCRWLRPE bmy_10934T0/1-715 -MAKPTLRGN GTNSETFRQR FRRFHYQEVA GPREAFSQLW ELCCRWLRPE BACU004929/1-850 -MAKPTLRGN GTNSETFRQR FRRFHYQEVA GPREAFSQLW ELCCRWLRPE 51 100 ENSP00000380174/1-852 VRTKEQIVEL LVLEQFLTVL PGEIQNWVQE QCPENGEEAV TLVEDLEREP ENSBTAP00000019251/1-850 VRTKEQIVEL LVLEQFLTVL PGEIQNWVQK QCPESGEEAV TLVEDLEREP ENSTTRP00000015390/1-849 VRTKEQIVEL LVLEQFLTVL PGEIQKWVQK QCPESGEEAV ALVEELEREP bmy_10934T0/1-715 VRTKEQIVEL LVLEQFLTVL PGEIQKWVQK QCPESGEEAV ALVEDLEREP BACU004929/1-850 VRTKEQIVEL LVLEQFLTVL PGEIQKWVQK QCPESGEEAV ALVEDLEREP 101 150 ENSP00000380174/1-852 GRPRSSVTVS VKGQEVRLEK MTPPKSSQEL LSVRQESVEP QPRGVPKKER ENSBTAP00000019251/1-850 GRPGRSVTVS VKGQEVRLEK MTPLKSSQEL LSVRQESVEP QPRGVPKKER ENSTTRP00000015390/1-849 GRPGRSVTVS VKGQEVRLEK MTPLKSSREL LSVRQESVEP QPRGVPKKER bmy_10934T0/1-715 GRPGRSVTVS VKGQEVRLEK MTPLKSSREL LSVRQESVEP QPRGVPKKER BACU004929/1-850 GRPGRSVTVS VKGQEVRLEK MTPLKSSREL LSVRQESVEP QPRGVPKKER 151 200 ENSP00000380174/1-852 ARSPDLGPQE QMNPKEKLKP FQRSGLPFPK SGVVSRLEQG EPWIPDLLGS ENSBTAP00000019251/1-850 ARSPDLGPQE QMNPKEKLRP FQRSGFPCSK SSMVSRLEQG EPWIPD-LGS ENSTTRP00000015390/1-849 ARNPDLGPQE QMNPKEKLRP -QRSGFPFPK SSVVSKLEQG EPWIPD-LGF bmy_10934T0/1-715 ARNPDLGPQE QMHPKEKLRP FQRSGFPFPK SSVVSKLEQG EPWIPD-LGS BACU004929/1-850 ARNPDLGPQE QMNPKEKLRP FQRSGFPVPK SSVVSKLEQG EPWIPD-LGS 201 250 ENSP00000380174/1-852 KEKELPSGSH IGDRRVHADL LPSKKDRRSW VEQDHWSFED EKVAGVHWGY ENSBTAP00000019251/1-850 KEKELPRGSH TEDRRMPADL LPSRRERSSW VDQDHWGFED EKVAGVHWGH ENSTTRP00000015390/1-849 KEKEFPRGSH TGDKRMHADL LPSRRERRSW VEQDHWGFED EKVAGVHWGY bmy_10934T0/1-715 KEKELPRGSH TGDRRMHADL LPSRRERRSW VEQDHWGFED EKVAGVHWGY BACU004929/1-850 KEKELPRGSH TGDRRMHADL LPSRRERRSW VEQDHWGFED EKVAGVHWGY 251 300 ENSP00000380174/1-852 EETRTLLAIL SQTEFYEALR NCHRNSQVYG AVAERLREYG FLRTLEQCRT ENSBTAP00000019251/1-850 EETRTLLAIL SQPEFYEALR NCHRNSQVYG AVAERLREFG FLRTLEQCRT ENSTTRP00000015390/1-849 EETRTLLAIL SQTEFYEALR NCHRNSQVYG AVAERLREYG FLRTLEQCRT bmy_10934T0/1-715 EETRTLLAIL SQTEFYEALR NCHRNSQVYG AVAERLREYG FLRTLEQCRT BACU004929/1-850 EETRTLLAIL SQTEFYEALR NCHRNSQVYG AVAERLREYG FLRTLEQCRT 301 350 ENSP00000380174/1-852 KFKGLQKSYR KVKSGHPPET CPFFEEMEAL MSAQVIALPS NGLEAAASHS ENSBTAP00000019251/1-850 KFKGLQKNYR KVKSGHPPET CPFFEEMEAL MSAQVIALPS NGPEEATSHS ENSTTRP00000015390/1-849 KFKGLQKSYR KVKSGHPPET CPFFEEMEAL MSAQVIALPS NGLEEAASHS bmy_10934T0/1-715 KFKGLQKSYR KVKSGHPPET CPFFEEMEAL MSAQVIALPS NGLEEAASHS BACU004929/1-850 KFKGLQKSYR KVKSGHPPET CPFFEEMEAL MSAQVIALPS NGLEEAASHS 351 400 ENSP00000380174/1-852 GLVGSDAETE EPGQRGWQHE EGAEEAVAQE SDSDDMDLEA TPQDP-NSAA ENSBTAP00000019251/1-850 GLGGSDAETK EPEQEGWHHE GG-EEATAEE SDSDEVGQEA TPRDPDSSTT ENSTTRP00000015390/1-849 GLVGSDAETE EPEQQDWQHK EG--DAMAEE SDSEEVGQEA TPQDPDKSTT bmy_10934T0/1-715 GLVGSDAETE EPEQQDWQHK EG-EDAMAEE SDSEEVGQEA TPQDPDNSTT BACU004929/1-850 GLVGSDAETE EPEQQDWQHK EG-EEAMAEE SDSEEVGQEA TPQDPDNSTT 401 450 ENSP00000380174/1-852 PVVFRSPGGV HWGYEETKTY LAILSETQFY EALRNCHRNS QLYGAVAERL ENSBTAP00000019251/1-850 PVLFRSPSGV HWGYEETKTY LGILSETQFY EALRNCHRNS QLYGAVAERL ENSTTRP00000015390/1-849 PVLFRSPSGV HWGYEETKTY LAILSETQFY EALQNCHRNS QLYGAVAERL bmy_10934T0/1-715 PVLFRSPSGV HWGYEETKTY LAILSETQFY EALQNCHRNS QLYGAVAERL BACU004929/1-850 PVLFRSPSGV HWGYEETKTY LAILSETQFY EALQNCHRNS QLYGAVAERL 451 500 ENSP00000380174/1-852 WEYGFLRTPE QCRTKFKSLQ TSYRKVKNGQ APETCPFFEE MDALVSVRVA ENSBTAP00000019251/1-850 WEYGFLRTPE QCRTKFKSLQ TSYRKVKNGQ APETCPFFEE MDALVNARVA ENSTTRP00000015390/1-849 WEYGFLRTPE QCRTKFKSLH TSYRKVKNGQ APETCPFFEE MDALVSARGA bmy_10934T0/1-715 WEYGFLRTPE QCRTKFKSLH TSYRKVKNGQ APETCPFFEE MDALVSAXGA BACU004929/1-850 WEYGFLRTPE QCRTKFKSLH TSYRKVKNGQ APDTCPFFEE MDALVSARGA 501 550 ENSP00000380174/1-852 APPNDGQEET AS-CPVQGTS EAEAQKQAEE ADEATEEDSD DDEEDTEIPP ENSBTAP00000019251/1-850 ARPSDGQEEE TALCPMQETS EAEAEKQAEP AVEAIEDDSE DDEEDPEIPP ENSTTRP00000015390/1-849 ALPSDGREEE AALCPTRETS EAEAEKQAEE ADEAIEEDSE DDEEDTEVPP bmy_10934T0/1-715 ALPSDGREEE AALCPTQETS EAEAEKQAEE ADEAIEEDSE DEEEDTEVPP BACU004929/1-850 ALPSDGREEE AALCPTQETS EAEAEKQAEE ADEAIEEDSE DDEEDTEVPP 551 600 ENSP00000380174/1-852 GAVITRAPVL FQSPRGFEAG FENEDNSKRD ISEEVQLHRT LLARSERKIP ENSBTAP00000019251/1-850 EA-LTRAPVL FQSPSGFEAG FENEENLKRD ISEEVQLHKT LLARSERKIP ENSTTRP00000015390/1-849 EA-MTRAPVL FQSPSGFEAG FENEENLKRD IAEEVQLHRT LLARSERKIP bmy_10934T0/1-715 EA-MTRAPVL FQSPSGFEAG FENEENLKRD IAEEVQLHRT LLARSERKIP BACU004929/1-850 EA-MTRAPVL FQSPSGFEAG FENEENLKRD IAEEVQLHRT LLARSERKIP 601 650 ENSP00000380174/1-852 RYLHQGKGNE SDCRSGRQWA KTSGEKRGKL TLPEKSLSEV LSQQRPCLGE ENSBTAP00000019251/1-850 RHLNQSKSNE SECRSGRQWE NTLGEKKGKP TFPE-SLGKV PSHQRPYLGE ENSTTRP00000015390/1-849 RHLNQGKGIE SECRSGRQWE KTPGERRGKP AFPERSLGKV LSHQRPYLGE bmy_10934T0/1-715 RHLNQGKGTE SECRSGRQWE KTPGERRGKP TFPEKSLGKV LSHQRPYLGE BACU004929/1-850 RHLNQGKGTE SECRSGRQWE KTPGERRGKP TFPERSLGKV LSHQRPYLGE 651 700 ENSP00000380174/1-852 RPYKYLKYSK SFGPNSLLMH QVSHQVENPY KCADCGKSFS RSARLIRHRR ENSBTAP00000019251/1-850 RPYKYLRYSK SFGPNSHPMH QLAHQVENPY KCADCGKSFS RSARLIRHRR ENSTTRP00000015390/1-849 RPYKYLRYGK SFGPNSHLMH QISPQVENPY KCADCGKSFS RSARLIRHRR bmy_10934T0/1-715 RPYKYLRYGK SFGPNSHLVH QISPQVENPY KCADCGKSFS RSARLIRHRR BACU004929/1-850 RPYKYLRYGK SFGPNSHLVH QISPQVENPY KCADCGKSFS RSARLIRHRR 701 750 ENSP00000380174/1-852 IHTGEKPYKC LDCGKSFRDS SNFITHRRIH TGEKPYQCGE CGKCFNQSSS ENSBTAP00000019251/1-850 IHTGEKPYQC LDCGKSFRDS SNFITHRRIH TGEKPYECGE CGKRFNQSSS ENSTTRP00000015390/1-849 IHTGEKPYKC LDCGKSFRDS SNFITHRRIH TGEKPYQCGE CGKRFNQSSS bmy_10934T0/1-715 IHTGEKPYKC LDCGKSFRD- ---------- ---------- ---------- BACU004929/1-850 IHTGEKPYKC LDCGKSFRDS SNFITHRRIH TGEKPYQCGE CGKRFNQSSS 751 800 ENSP00000380174/1-852 LIIHQRTHTG EKPYQCEECG KSFNNSSHFS AHRRIHTGER PHVCPDCGKS ENSBTAP00000019251/1-850 LIIHQRTHTG EKPYQCEECG KSFNNSSHFS AHRRIHTGER PHVCPDCGKS ENSTTRP00000015390/1-849 LIIHQRTHTG EKPYQCEECG KSFNNSSHFS AHRRIHTGER PHVCPDCGKS bmy_10934T0/1-715 ---------- ---------- ---------- ---------- ---------- BACU004929/1-850 LIIHQRTHTG EKPYQCEECG KSFNNSSHFS AHRRIHTGER PHVCPDCGKS 801 850 ENSP00000380174/1-852 FSKSSDLRAH HRTHTGEKPY GCHDCGKCFS KSSALNKHGE IHAREKLLTQ ENSBTAP00000019251/1-850 FSKSSDLRAH HRTHTGEKPY GCQDCGKCFS KSSALNKHRE IHTREKLLSQ ENSTTRP00000015390/1-849 FSKSSDLRAH HRTHTGEKPY GCHDCGKCFS KSSALNKHRE IHTREKLLSQ bmy_10934T0/1-715 ---------- ---------- ---------- ---------- ---------- BACU004929/1-850 FSKSSDLRAH HRTHTGEKPY GCHDCGKCFS KSSALNKHRE IHTREKLLSQ 851 900 ENSP00000380174/1-852 SAPK ENSBTAP00000019251/1-850 PAPK ENSTTRP00000015390/1-849 PAPK bmy_10934T0/1-715 ---- BACU004929/1-850 PAPK