KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:14 2014 Check: 00 .. Name: bmy_10933T0/1-342 Len: 666 Check: 6667 Weight: 1.00 Name: BACU020422/1-638 Len: 666 Check: 3758 Weight: 1.00 Name: ENSP00000456648/1-666 Len: 666 Check: 7050 Weight: 1.00 Name: ENSTTRP00000015392/1-649 Len: 666 Check: 7719 Weight: 1.00 Name: ENSBTAP00000019254/1-666 Len: 666 Check: 7640 Weight: 1.00 // 1 50 bmy_10933T0/1-342 MIHELLLALS GYPGSIFTWN KRSGLQVSQD FPFLHPSETS VLNRLCRLGT BACU020422/1-638 ---------- ---------- ----LQVSQD FPFLHPSETS VLNRLCRLGT ENSP00000456648/1-666 MIHELLLALS GYPGSIFTWN KRSGLQVSQD FPFLHPSETS VLNRLCRLGT ENSTTRP00000015392/1-649 MIHELLLALS GYPGSIFTWN KRSGLQVSQD FPFLHPSETS VLNRLCRLGT ENSBTAP00000019254/1-666 MIHELLLALS GYPGSIFTWN KRSGLQVSQD FPFLHPSETS VLNRLCRLGT 51 100 bmy_10933T0/1-342 DYIRFIEFTE QYTGHVQQQD HHPSQQGQGG SHGIYLRAFC TGLDSLLQPY BACU020422/1-638 DYIRFIEFTE QYTGHVQQQD HHPSQQGQGG SHGIYLRAFC TGLDSVLQPY ENSP00000456648/1-666 DYIRFTEFIE QYTGHVQQQD HHPSQQGQGG LHGIYLRAFC TGLDSVLQPY ENSTTRP00000015392/1-649 DYIRFTEFIE QYTGHVQQQD HHPSQQGQGG SHGIYLRAFC TGLDSVLQPY ENSBTAP00000019254/1-666 DYIRFTEFIE QYTGHVQQQD HHPSQQGQGG SHGIYLRAFC TGLDSVLQPY 101 150 bmy_10933T0/1-342 RQALLDLEQE FLADPHLSIS HVNYSLDQFQ LLFPSVMVVV EQIKSQKIHG BACU020422/1-638 RQALLDLEQE FLADPHLSIS HVNYSLDQFQ LLFPSVMVVV EQIKSQKIHG ENSP00000456648/1-666 RQALLDLEQE FLGDPHLSIS HVNYFLDQFQ LLFPSVMVVV EQIKSQKIHG ENSTTRP00000015392/1-649 RQALLDLEQE FLADPHLSIS HVNYSLDQFQ LLFPSVMVVV EQIKSQKIHG ENSBTAP00000019254/1-666 RQALLDLEQE FLADPHLSIS HVNYSLDQFQ LLFPSVMVVV EQIKSQKIHG 151 200 bmy_10933T0/1-342 CQILETVYKH SCGGLPPVRS ALEKILAVCH GVMYKQLSAW MLHGLLLDQH BACU020422/1-638 CQILETVYKH SCGGLPPVRS ALEKILAVCH GVMYKQLSAW MLHGLLLDQH ENSP00000456648/1-666 CQILETVYKH SCGGLPPVRS ALEKILAVCH GVMYKQLSAW MLHGLLLDQH ENSTTRP00000015392/1-649 CQILETVYKH SCGGLPPVRS ALEKILAVCH GVMYKQLSAW MLHGLLLDQH ENSBTAP00000019254/1-666 CQILETVYKH SCGGLPPVRS ALEKILAVCH GVMYKQLSAW MLHGLLLDQH 201 250 bmy_10933T0/1-342 EEFFIKQGPS SGNVSAQPEE DEEDLGIGGL TGKQLRELQD LRLIEEENML BACU020422/1-638 EEFFIKQGPS SGSVSAQPEE DEEDLGIGGL TGKQLRELQD LRLIEEENML ENSP00000456648/1-666 EEFFIKQGPS SGNVSAQPEE DEEDLGIGGL TGKQLRELQD LRLIEEENML ENSTTRP00000015392/1-649 EEFFIKQGPS SGNVSAQPEE DEEDLGIGGL TGKQLRELQD LRLIEEENML ENSBTAP00000019254/1-666 EEFFIKQGPS SGNVSAQPEE DEEDLGIGGL TGKQLRELQD LRLIEEENML 251 300 bmy_10933T0/1-342 APSLKQFSLR VEILPSYIPV RVAEKILFVG ESVQMFENQN VNLTRKGSIL BACU020422/1-638 APSLKQFSLR VETLPSYIPV RVAEKILFVG ESVQMFENQN VNLTRKGSIL ENSP00000456648/1-666 APSLKQFSLR VEILPSYIPV RVAEKILFVG ESVQMFENQN VNLTRKGSIL ENSTTRP00000015392/1-649 APSLKQFSLR VEILPSYIPV RVAEKILFVG ESVQMFENQN VNLTRKGSIL ENSBTAP00000019254/1-666 APSLKQFSLR VEILPSYIPV RVAEKILFVG ESVQMFENQN VNLTRKGSIL 301 350 bmy_10933T0/1-342 KNQEDTFAAE LHRLKQQPLF SLVDFEQVVD RIRSTVAEV- ---------- BACU020422/1-638 KNQEDTFAAE LHRLKQQPLF SLVDFEQVVD RIRSTVAEHL WKLMVEESDL ENSP00000456648/1-666 KNQEDTFAAE LHRLKQQPLF SLVDFEQVVD RIRSTVAEHL WKLMVEESDL ENSTTRP00000015392/1-649 KNQEDTFAAE LHRLKQQPLF SLVDFEQVVD RIRSTVAEHL WKLMVEESDL ENSBTAP00000019254/1-666 KNQEDTFAAE LHRLKQQPLF SLVDFEQVVD RIRSTVAEHL WKLMVEESDL 351 400 bmy_10933T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU020422/1-638 LGQLKIIKDF YLLGRGELFQ AFIDTAQHML KTPPTAVTEH DVNVAFQQSA ENSP00000456648/1-666 LGQLKIIKDF YLLGRGELFQ AFIDTAQHML KTPPTAVTEH DVNVAFQQSA ENSTTRP00000015392/1-649 LGQLKIIKDF YLLGRGELFQ AFIDTAQHML KTPPTAVTEH DVNVAFQQSA ENSBTAP00000019254/1-666 LGQLKIIKDF YLLGRGELFQ AFIDTAQHML KTPPTAVTEH DVNVAFQQSA 401 450 bmy_10933T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU020422/1-638 HKVLLDDDNL LPLLHLTIEY HGKEHKDATQ AREGPSRETS PREAPASGWA ENSP00000456648/1-666 HKVLLDDDNL LPLLHLTIEY HGKEHKDATQ AREGPSRETS PREAPASGWA ENSTTRP00000015392/1-649 HKVLLDDDNL LPLLHLTIEY HGKEHKDATQ AREGPSRETS PREAPASGWA ENSBTAP00000019254/1-666 HKVLLDDDNL LPLLHLTIEY HGKEHKDAPQ AREGPSRETS PREAPASGWA 451 500 bmy_10933T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU020422/1-638 ALGLSYKVQW PLHILFTPAV LEKYNVVFKY LLSVRRVQAE LQHCWALQMQ ENSP00000456648/1-666 ALGLSYKVQW PLHILFTPAV LEKYNVVFKY LLSVRRVQAE LQHCWALQMQ ENSTTRP00000015392/1-649 ALGLSYKVQW PLHILFTPAV LEKYNVVFKY LLSVRRVQAE LQHCWALQMQ ENSBTAP00000019254/1-666 ALGLSYKVQW PLHILFTPAV LEKYNVVFKY LLSVRRVQAE LQHCWALQMQ 501 550 bmy_10933T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU020422/1-638 RKHLKSNQTD AVKWRLRNHM AFLVDNLQYY LQVDVLESQF SQLLHQINST ENSP00000456648/1-666 RKHLKSNQTD AIKWRLRNHM AFLVDNLQYY LQVDVLESQF SQLLHQINST ENSTTRP00000015392/1-649 RKHLKSNQTD AVKWRLRNHM AFLVDNLQYY LQVDVLESQF SQLLHQINST ENSBTAP00000019254/1-666 RKHLKSNQSD AVKWRLRNRM AFLVDNLQYY LQVDVLESQF SQLLHQINST 551 600 bmy_10933T0/1-342 ---------- ---------- ---------- CLS------- ---------- BACU020422/1-638 RDFESIRLAH DHFLSNLLAQ SFILLKPVFH CLNEILDLCH SFCSLVSQNL ENSP00000456648/1-666 RDFESIRLAH DHFLSNLLAQ SFILLKPVFH CLNEILDLCH SFCSLVSQNL ENSTTRP00000015392/1-649 RDFESIRLAH ---------- -------VFH CLNEILDLCH SFCSLVSQNL ENSBTAP00000019254/1-666 RDFESIRLAH DHFLSNLLAQ SFILLKPVFH CLNEILDLCH SFCSLVSQNL 601 650 bmy_10933T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU020422/1-638 GPLDERGAAQ LSILVKGFSR QSSLLFKILS SVRNHQINSD LAQLLLRLDY ENSP00000456648/1-666 GPLDERGAAQ LSILVKGFSR QSSLLFKILS SVRNHQINSD LAQLLLRLDY ENSTTRP00000015392/1-649 GPLDERGAAQ LSILVKGFSR QSSLLFKILS SVRNHQINSD LAQLLLRLDY ENSBTAP00000019254/1-666 GPLDERGAAQ LSILVKGFSR QSSLLFKILS SVRNHQINSD LAQLLLRLDY 651 700 bmy_10933T0/1-342 ---------- ------ BACU020422/1-638 NKYYTQAGGT LG---- ENSP00000456648/1-666 NKYYTQAGGT LGSFGM ENSTTRP00000015392/1-649 NKYYTQAGGT LGSFGM ENSBTAP00000019254/1-666 NKYYTQAGGT LGSFGM