KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:16 2014 Check: 00 .. Name: bmy_12459T0/1-467 Len: 622 Check: 4116 Weight: 1.00 Name: ENSBTAP00000019260/1-587 Len: 622 Check: 9477 Weight: 1.00 Name: BACU010286/1-189 Len: 622 Check: 4535 Weight: 1.00 Name: ENSP00000262753/1-589 Len: 622 Check: 2231 Weight: 1.00 Name: ENSTTRP00000004687/1-593 Len: 622 Check: 8262 Weight: 1.00 // 1 50 bmy_12459T0/1-467 ---------- ---MGDKTII HPVINSYKSH PWVGLPREGN TLCPESSH-- ENSBTAP00000019260/1-587 ---------- --------MS SSYSSEM-SS SSCGTQQSPE VLPCQPQHYH BACU010286/1-189 MNLKGEHLGS TLLTTEKMMS SNYWSEMSSS SSCGTQQSPE GLQCQPQHYH ENSP00000262753/1-589 ---------- --------MS SSYWSET-SS SSCGTQQLPE VLQCQPQHYH ENSTTRP00000004687/1-593 ---------- --------MS SNYWSEM-SS SSCGTQQSPE VLQCQPQHYR 51 100 bmy_12459T0/1-467 -----DERGC PGARLASWAR SGVRVT-GPD TGRCQA--PW VRRPVLGP-- ENSBTAP00000019260/1-587 CYRQSSQAQQ PPEKNIVYQR --VRTYSGPM NKVVQTLDPV GSGEVLSPLK BACU010286/1-189 CYHQSSQAQQ PPEKNVVYER --VRTYSGPM NKVVEALGPI GSREVCSSLK ENSP00000262753/1-589 CYHQSSQAQQ PPEKNVVYER --VRTYSGPM NKVVQALDPF NSREVLSPLK ENSTTRP00000004687/1-593 CYHQSRQAQQ PPEKNVVYER --VRTYSGPM NKVVEALDPI GSREVCSPLK 101 150 bmy_12459T0/1-467 -----SGRHW VS-GQEWAAR LSRGQPAWPA GATRSTRPAG VQGFFPPSSQ ENSBTAP00000019260/1-587 TASSYQSLVW SDHSQELHSP TLKISTCVP- -GTLHITPNT EQELHSPTVK BACU010286/1-189 TASSYQSLLW SDRSQELHSP TLKISTCAP- -STLHITPNT EQELHSPTVK ENSP00000262753/1-589 TTSSYQNLVW SDHSQELHSP TLKISTCAP- -STLHITQNT EQELHSPTVK ENSTTRP00000004687/1-593 TASSYQSLLW SDRSQELHST TLKISTCAP- -STVHITPNI EQELHSPTVK 151 200 bmy_12459T0/1-467 QGVSQLAFSA TRALRSLCPG LQSNPRLQHR AEARQQTALI LAKEIPLLE- ENSBTAP00000019260/1-587 --VTTYPQTT IRRYIVQSPE QEPLSPFLRG GHFFPGNNVI YEKTIRKVEK BACU010286/1-189 --VTTYPQTT IRQYVVQNPE Q--------- ---------- ---------- ENSP00000262753/1-589 --LTTYPQTT IRKYVVQNPE QEPLSQFLRG SHFFPGNNVI YEKTIRKVEK ENSTTRP00000004687/1-593 --VTTYPQTT IRQYVVQNPE QEPLSPFLRG GHFFPGNNVI YEKTIKKVEK 201 250 bmy_12459T0/1-467 ------SHRP QIRN------ -----KSPDW KQDKNFQGSS EVKPMVFLY- ENSBTAP00000019260/1-587 LNMDQGCHKP KAKSYTHKT- -QEVLKRSQW HDEQSVEGVH IVSYKIPLYT BACU010286/1-189 ---------- ---------- ---------- ---------- ---------- ENSP00000262753/1-589 LNTDQGCH-P QAQCHHHIIQ QPQVIHSAHW QQPDSSQQIQ AITGNNPIST ENSTTRP00000004687/1-593 LNTDPECY-P QVQCHHHIV- QPQIFHSLHY QQSHSSQQIQ TITGSDSIST 251 300 bmy_12459T0/1-467 ---------- -------KVI IQDDGPEKLD PKYFGELLAD LSCKNTNLYH ENSBTAP00000019260/1-587 RLGKKSWCEI FLSQVSYQVI IQDDSPEKLD PKYFGELLAD LSRKNTDLYH BACU010286/1-189 ---------- ---------- ILDMSPP--- ---------- ---------- ENSP00000262753/1-589 HIGNEL-CHS GSSQICEQVI IQDDGPEKLD PRYFGELLAD LSRKNTDLYH ENSTTRP00000004687/1-593 NTGIER-YHS DSNHTHEQVI IQDDGPEKLD PKYFGELLAD LCRKNTNLYH 301 350 bmy_12459T0/1-467 CLLEHLQRIG GSKQDFESTD ESEDIESLIP KGLSEFTKQQ IRYILQMRGM ENSBTAP00000019260/1-587 CLLEHLQRIG GSKRDFESID ESEDIESLIP KGLSEFTKQQ IRYILQMRDM BACU010286/1-189 ---------- ---------- ---------- ---------- ---------- ENSP00000262753/1-589 CLLEHLQRIG GSKQDFESTD ESEDIESLIP KGLSEFTKQQ IRYILQMRGM ENSTTRP00000004687/1-593 CLLEHLHRIG G-KQDFESTD ESEDTESLIP KGLSEFTKQQ IRYILQMRGM 351 400 bmy_12459T0/1-467 SDKSLRLVLS TFSNIQEELG HLQNDLTSLE NDKIRFEKDL AFKETQIKEY ENSBTAP00000019260/1-587 SAKSLRLVLS TFSNIREELG HLQNDLTSLE NDKIRLEKDL AFKETQIKEY BACU010286/1-189 -------IIS LVTTSK---- HLDNP----- ---------- ---------- ENSP00000262753/1-589 SDKSLRLVLS TFSNIREELG HLQNDMTSLE NDKMRLEKDL SFKDTQLKEY ENSTTRP00000004687/1-593 SDKSLRLVLS TFSNIREELG NLQNDLTSLE NDKIRLEKDL AFKETQIKEY 401 450 bmy_12459T0/1-467 EELLASVRAN NRQQQQGLED STSKCQALEE NNLSLRHTLS DIEYKLKELE ENSBTAP00000019260/1-587 EELLASVRAD NRQQQQGCQD STSKCQALEE HNLSLRHTLS DVEYRLKELE BACU010286/1-189 ---------- ---------- ---------- ---------- ---------- ENSP00000262753/1-589 EELLASVRAN NHQQQQGLQD SSSKCQALEE NNLSLRHTLS DMEYRLKELE ENSTTRP00000004687/1-593 EELLASVRAN NRQQQQGLQD STSKCQALEE NNLSLRHTLS DIEYKLKELE 451 500 bmy_12459T0/1-467 YCKHNLEQEN KNLRVQLSET CTGPMLQAKV DEIGNHYMEM VKNLRMEKDR ENSBTAP00000019260/1-587 YCKRNLEQEN KNLRIQVFKF CFKHFLHNSL --ITENYFAL CRFLRRKNNF BACU010286/1-189 ---------- ---------- ---------- ---------- ---------- ENSP00000262753/1-589 YCKRNLEQEN QNLRMQVSET CTGPMLQAKM DEIGNHYTEM VKNLRMEKDR ENSTTRP00000004687/1-593 YCKRNLEQEN KNLKVQLSET CTGPMLQAKM AEIGNHYMEM VKSLRMEKDR 501 550 bmy_12459T0/1-467 EICKLR---- ---------- ---------- ---------- ---------E ENSBTAP00000019260/1-587 QDCPVKPHLN QYQKDVSRRE GSCNDFQFKI HELTSLLEEK DSLIKRQSEE BACU010286/1-189 ---------- ---------- ---------- ---------- ---------- ENSP00000262753/1-589 EICRLRSQLN QYHKDVSKRE GSCSDFQFKL HELTSLLEEK DSLIKRQSEE ENSTTRP00000004687/1-593 EICKLRTQLN QYQKDVSRRE GSCSDFQFKI HELTSLLEEK DSLIKHQSEE 551 600 bmy_12459T0/1-467 LSKLRQDIYS SHNQPSSGGR TTITTRK--- ---------- ---------- ENSBTAP00000019260/1-587 LSKLRQEIYS SHNQPSSGGR TTITTKKYRT QYPILGLLYD DYEYIPPGSD BACU010286/1-189 ---------- ---------- TSI------- ---------- ---------- ENSP00000262753/1-589 LSKLRQEIYS SHNQPSTGGR TTITTKKYRT QYPILGLLYD DYEYIPPGSE ENSTTRP00000004687/1-593 LSKLRQEIYS SHNQPSSGGR TTITTRKYRS QYPILGLLYD DYEYIPPGSD 601 650 bmy_12459T0/1-467 ---------- ---------- -- ENSBTAP00000019260/1-587 TKTIVIEKTE DKWTCP---- -- BACU010286/1-189 ---------- ---------- -- ENSP00000262753/1-589 TQTIVIEKTE DKYTCP---- -- ENSTTRP00000004687/1-593 TQTIVIEKIE DKWTCVSSLG HF