KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:16 2014 Check: 00 .. Name: ENSP00000357552/1-539 Len: 585 Check: 1174 Weight: 1.00 Name: bmy_06840T0/1-390 Len: 585 Check: 1215 Weight: 1.00 Name: BACU014246/1-509 Len: 585 Check: 9921 Weight: 1.00 Name: ENSTTRP00000010449/1-581 Len: 585 Check: 1083 Weight: 1.00 Name: ENSBTAP00000019262/1-538 Len: 585 Check: 8137 Weight: 1.00 // 1 50 ENSP00000357552/1-539 ---------- ---------- ---------- ---------- ------MDAM bmy_06840T0/1-390 MGGCGWGARL SPPPLLVSAA ASAAAAAAAA ACKGFWEASL GVS----DAM BACU014246/1-509 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000010449/1-581 ---RRPPSVA SLVFRLIARG GVVTPLLGAD AAAGDWKVRA PDSATLIDAM ENSBTAP00000019262/1-538 ---------- ---------- ---------- ---------- -------DAM 51 100 ENSP00000357552/1-539 ASPGKDNYRM KSYKNKALNP QEMRRRREEE GIQLRKQKRE EQLFKRRNVY bmy_06840T0/1-390 ASPGKDNYRM KSYKNKALNP QEMRRRREEE GIQLRKQKRE EQ-------- BACU014246/1-509 ASPGKDNYRM KSYKNKALNP QEMRRRREEE GIQLRKQKRE EQLFKRRNVS ENSTTRP00000010449/1-581 ACPGKDNYRM KSYKNKALNP QEMRRRREEE GIQLRKQKRE EQLFKRRNVS ENSBTAP00000019262/1-538 ASPGKDNYRM KSYKNKALNP QEMRRRREEE GIQLRKQKRE EQLFKRRNVS 101 150 ENSP00000357552/1-539 LPRNDESMLE SPIQDPDISS TVPIPEEEVV TTDMVQMIFS NNADQQLTAT bmy_06840T0/1-390 ---------- ---------- ------GD-- ---------- ---------- BACU014246/1-509 LPRNDESMLE NPIQDPDISS TVPIPEGD-- ---------- ---------- ENSTTRP00000010449/1-581 LPRNDESMLE NPIQDPDISS TVPIPEEEVI TTDMVQMIFS NNADQQLTAT ENSBTAP00000019262/1-538 LPRNDESMLE NPIQDPDISS TVPIPEEEVI TSDMVQMIFS NNADQQLTAT 151 200 ENSP00000357552/1-539 QKFRKLLSKE PNPPIDQVIQ KPGVVQRFVK FLERNENCTL QFEAAWALTN bmy_06840T0/1-390 -----YACPE PNPPIDQVIQ KPGVVQRFVK FLERNENCTL QFEAAWALTN BACU014246/1-509 -----YACPE PNPPIDQVIQ KPGVVQRFVK FLERNENCTL QFEAAWALTN ENSTTRP00000010449/1-581 QKFRKLLSKE PNPPIDQVIQ KPGVVQRFVK FLERNENCTL QFEAAWALTN ENSBTAP00000019262/1-538 QKFRKLLSKE PNPPIDQVIQ KPGVVQRFVK FLERNENCTL QFEAAWALTN 201 250 ENSP00000357552/1-539 IASGTFLHTK VVIETGAVPI FIKLLNSEHE DVQEQAVWAL GNIAGDNAEC bmy_06840T0/1-390 IASGTFLHTK VVIETGAVPI FIKLLNSEHE DVQEQAVWAL GNIAGDNAEC BACU014246/1-509 IASGTFLHTK VVIETGAVPI FIKLLNSEHE DVQEQAVWAL GNIAGDNAEC ENSTTRP00000010449/1-581 IASGTFLHTK VVIETGAVPI FIKLLNSEHE DVQEQAVWAL GNIAGDNAEC ENSBTAP00000019262/1-538 IASGTFLHTK VVIETGAVPI FIKLLNSEHE DVQEQAVWAL GNIAGDNAEC 251 300 ENSP00000357552/1-539 RDFVLNCEIL PPLLELLTNS NRLTTTRNAV WALSNLCRGK NPPPNFSKVS bmy_06840T0/1-390 RDFVLNCEIL PPLLELLTNS NRLTTTRNAV WALSNLCRGK NPPPNFSKVS BACU014246/1-509 RDFVLNCEIL PPLLELLTNS NRLTTTRNAV WALSNLCRGK NPPPNFSKVS ENSTTRP00000010449/1-581 RDFVLNCEIL PPLLELLTNS NRLTTTRNAV WALSNLCRGK NPPPNFSKVS ENSBTAP00000019262/1-538 RDFVLNCEIL PPLLELLTNS NRLTTTRNAV WALSNLCRGK NPPPNFSKVS 301 350 ENSP00000357552/1-539 PCLNVLSRLL FSSDPDVLAD VCWALSYLSD GPNDKIQAVI DSGVCRRLVE bmy_06840T0/1-390 PCLNVLSRLL FSSDPDVLAD VCWALSYLSD GSNDKIQAVI DSGVCRRLVE BACU014246/1-509 PCLNVLSRLL FSSDPDVLAD VCWALSYLSD GSNDKIQAVI DSGVCRRLVE ENSTTRP00000010449/1-581 PCLNVLSRLL FSSDPDVLAD VCWALSYLSD GS-DKIQAVI DSGVCRRLVE ENSBTAP00000019262/1-538 PCLNVLSRLL FSSDPDVLAD VCWALSYLSD GSNDKIQAVI DSGVCRRLVE 351 400 ENSP00000357552/1-539 LLMHNDYKVV SPALRAVGNI VTGDDIQTQV ILNCSALPCL LHLLSSPKES bmy_06840T0/1-390 LLM------- ---------- ---------- ---------- ---------- BACU014246/1-509 LLMHNDYKVV SPALRAVGNI VTGDDIQTQV ILNCSALPCL LHLLSSSKES ENSTTRP00000010449/1-581 LLMHNDYKVV SPALRAVGNI VTGDDIQTQV ILNCSALPCL LHLLSSSKES ENSBTAP00000019262/1-538 LLMHNDYKVV SPALRAVGNI VTGDDIQTQV ILNCSALPCL LHLLSSSKES 401 450 ENSP00000357552/1-539 IRKEACWTVS NITAGNRAQI QAVIDANIFP VLIEILQKAE FRTRKEAAWA bmy_06840T0/1-390 ---------- ---------- ---------- ---------- ---------- BACU014246/1-509 IRKEACWTVS NITAGNRAQI QAVIDANIFP VLIEILQKAE FRTRKEAAWA ENSTTRP00000010449/1-581 IRKEACWTVS NITAGNRAQI QGVIDANIFP VLIEILQKAE FRTRKEAAWA ENSBTAP00000019262/1-538 IRKEACWTVS NITAGNRAQI QAVIDANIFP VLIEILQKAE FRTRKEAAWA 451 500 ENSP00000357552/1-539 ITNATSGGTP EQIRYLVALG CIKPLCDLLT VMDSKIVQVA LNGLENILRL bmy_06840T0/1-390 ---------- ----YLVALG CIKPLCDLLT VMDSKIVQVA LNGLENILRL BACU014246/1-509 ITNATSGGTP EQIRYLVALG CIKPLCDLLT VMDSKIVQVA LNGLENILRL ENSTTRP00000010449/1-581 ITNATSGGTP EQIRYLVALG CIKPLCDLLT VMDSKIVQVA LNGLENILRL ENSBTAP00000019262/1-538 ITNATSGGTP EQIRYLVALG CIKPLCDLLT VMDSKIVQVA LNGLENILRL 501 550 ENSP00000357552/1-539 GEQESKQNGI GINPYCALIE EAYGLDKIEF LQSHENQEIY QKAFDLIEHY bmy_06840T0/1-390 GEQEC----- ---------- ----LDKIEF LQSHENQEIY QKAFDLIEHY BACU014246/1-509 GEQECKQNGI GINPYCALIE EAYGLDKIEF LQSHENQEIY QKAFDLIEHY ENSTTRP00000010449/1-581 GEQECKQNGI GINPYCALIE EAYGLDKIEF LQSHENQEIY QKAFDLIEHY ENSBTAP00000019262/1-538 GEQESKQNGI GINPYCALIE EAYGLDKIEF LQSHENQEIY QKAFDLIEHY 551 600 ENSP00000357552/1-539 FGVEEDDPSI VPQVDENQQQ FIFQQQEAPM DGFQL bmy_06840T0/1-390 FGVEDDDPSI VPQVDENQQQ FVFQQQEAPM EGFQL BACU014246/1-509 FGVEDDDPSI VPQVDENQQQ FVFQQQEAPM EGFQL ENSTTRP00000010449/1-581 FGVEDDDSSI VPHVDENQQQ FVFQQQEAPM EGFQL ENSBTAP00000019262/1-538 FGVEDDDPSI VPQVDENQQQ FVFQQQEAPM EGFQL