KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:19 2014 Check: 00 .. Name: BACU011721/1-361 Len: 450 Check: 5404 Weight: 1.00 Name: ENSBTAP00000019271/1-367 Len: 450 Check: 4579 Weight: 1.00 Name: ENSP00000355812/1-399 Len: 450 Check: 5510 Weight: 1.00 Name: bmy_17880T0/1-403 Len: 450 Check: 7543 Weight: 1.00 Name: ENSTTRP00000005661/1-306 Len: 450 Check: 4151 Weight: 1.00 // 1 50 BACU011721/1-361 MRTDKRERSA AEQAPVPNVR EQSFPPVLSA LDVCLGSLET EPGAGAAWPA ENSBTAP00000019271/1-367 ---------- ---------- ---------- -------LKA ELRAAVFLAL ENSP00000355812/1-399 MAATAAAVVA EEDTELRDLL VQTLEN---- -SGVLNRIKA ELRAAVFLAL bmy_17880T0/1-403 MAAAAAAVVA EEDTELRDLL VQTLEN---- -TGVASRLNS EQ-----LSL ENSTTRP00000005661/1-306 MAATAAAVVA EEDTELRDLL VQTLEN---- -SGVLNRIKA ELRAAVFLAL 51 100 BACU011721/1-361 GATGRACRLG SALTCTGVVQ ARGGSGRLVA SLVAEFLQFF NLDFTLAVFQ ENSBTAP00000019271/1-367 EEQEKVENKT PLVNESLKKF LNTKDGRLVA SLVAEFLQFF NLDFTLAVFQ ENSP00000355812/1-399 EEQEKVENKT PLVNESLKKF LNTKDGRLVA SLVAEFLQFF NLDFTLAVFQ bmy_17880T0/1-403 EEQEKVENKT PLVNESLKKF LNTKDGRLVA SLVAEFLQFF NLDFTLAVFQ ENSTTRP00000005661/1-306 EEQEKVENKT PLVNESLKKF LNTKDGRLVA SLVAEFLQFF NLDFTLAVFQ 101 150 BACU011721/1-361 PETSTFQGLE GRENLARDLG IIEAEGTVGG PLLLEVIRRC QQKEKGPTSG ENSBTAP00000019271/1-367 PETSTFQGLE GRENLARDLG IIEAEGTVGG PLLLEVIRRC QQKEKALTSG ENSP00000355812/1-399 PETSTLQGLE GRENLARDLG IIEAEGTVGG PLLLEVIRRC QQKEKGPTTG bmy_17880T0/1-403 PETSTFQGLE GRENLARDLG IIEAEGTVGG PLLLEVIRRC QQKEKGPTSG ENSTTRP00000005661/1-306 PETSTFQGLE GRENLARDLG IIEAEGTVGG PLLLEVIRRC QQKEKGPTSG 151 200 BACU011721/1-361 EGALDLSDVR PPPKSPEGKT SAHSAPS--- ---------- -------KKA ENSBTAP00000019271/1-367 EGALDLSDVH SPPKSPEGKT GAHTPPSKIP RYKGQGNKKT SGQQPGAKKA ENSP00000355812/1-399 EGALDLSDVH SPPKSPEGKT SAQTTPSKIP RYKGQGKKKT SGQKAGDKKA bmy_17880T0/1-403 EGALDLSDVR PPPKSPEGKT SAHSLPS--- ---------- -------KKA ENSTTRP00000005661/1-306 EGALDLSDVH SPPKSPEGKA SAHTPPSKIP RYKGQGKKKP SRRKSGAKKA 201 250 BACU011721/1-361 SNDASQSDTS ISSSEPKSKS SLHLLAHETK IGSLLSNKSL DVKDEAGPCP ENSBTAP00000019271/1-367 SNDASHSDTS ISSSEPKSRS GLHLLAHETK IGSLLSNNSL DVNAKAGPGP ENSP00000355812/1-399 NDEANQSDTS VSLSEPKSKS SLHLLSHETK IGSFLSNRTL DGKDKAGLCP bmy_17880T0/1-403 SNDASQSDTS ISSSEPKSKS SLHLLAHETK IGSLLSNKSL DVKDKAGPCP ENSTTRP00000005661/1-306 SNDASQSDTS ISSSEPKSKS SLHLLAHETK IGSLLSNKSL DVKDKAGPCP 251 300 BACU011721/1-361 DEDDMEGDSF FDDPIPKPEK TYGWRSEPSK QVGSLASLSD APPLKSGLSS ENSBTAP00000019271/1-367 EEDDLEGDSF FDDPIPKPEA AYGWRSEPSK QAGSLASLSD APPLKSGLSS ENSP00000355812/1-399 DEDDMEGDSF FDDPIPKPEK TYGLRKEPRK QAGSLASLSD APPLKSGLSS bmy_17880T0/1-403 DEDDMEGDSF FDDPIPKPEK TY-------- ---------E VNLVSNGVSS ENSTTRP00000005661/1-306 DEDDMEGDSF FDDPIPKPEK TYGWRSEPSK QVGSLASLSD APPLKSGLSS 301 350 BACU011721/1-361 LTGAPSLKDS ESKRGNTILK DLKLVNDKIG SLGLGTGEED DYADDFNSTS ENSBTAP00000019271/1-367 LAGAPSLKES ESKRGNTVLK DLKLVNDKIG SLGLGTGEED DYVDDFNSTS ENSP00000355812/1-399 LAGAPSLKDS ESKRGNTVLK DLKLISDKIG SLGLGTGEDD DYVDDFNSTS bmy_17880T0/1-403 LTGAPSLKDS ESKRGNTILK DLKLVNDKIG SLGLGTGEED DYVDDFNSTS ENSTTRP00000005661/1-306 LTGAPSLKDS E--------- ---------- ---------- ---------- 351 400 BACU011721/1-361 HRSEKSELSI GEEIEEDLSV EIDDVNTSDK V--------- ---------- ENSBTAP00000019271/1-367 HRSEKSELSI GEEIEEDLSV EMDDVNTSDK LDDLTQDLTV SQLSDVADYL ENSP00000355812/1-399 HRSEKSEISI GEEIEEDLSV EIDDINTSDK LDDLTQDLTV SQLSDVADYL bmy_17880T0/1-403 HRSEKSELSI GEEIEEDLSV EIDDVNTSDK LDDLTQDLTV SQLSDVADYL ENSTTRP00000005661/1-306 ---------- ---------- ---------- ---------- ---------- 401 450 BACU011721/1-361 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019271/1-367 EDVA------ ---------- ---------- ---------- ---------- ENSP00000355812/1-399 EDVA------ ---------- ---------- ---------- ---------- bmy_17880T0/1-403 EDVADITDPE VLKRTIGSGA CMFILILNIT EIFTRLRNVK GNDNVWIKVM ENSTTRP00000005661/1-306 ---------- ---------- ---------- ---------- ----------