KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:23 2014 Check: 00 .. Name: bmy_17121T0/1-754 Len: 932 Check: 6501 Weight: 1.00 Name: ENSP00000385597/1-695 Len: 932 Check: 9079 Weight: 1.00 Name: ENSBTAP00000019288/1-694 Len: 932 Check: 330 Weight: 1.00 Name: BACU005503/1-216 Len: 932 Check: 4753 Weight: 1.00 Name: ENSTTRP00000009163/1-625 Len: 932 Check: 2348 Weight: 1.00 // 1 50 bmy_17121T0/1-754 ---------- ---------- ---------- ---------- ---------- ENSP00000385597/1-695 MFLGTGEPAL DTGDDSLSAV TFDSDVETKA KRKAFHKPPP TSPKSPYLSK ENSBTAP00000019288/1-694 TFTGGGINWE CKGDDSLSAI TFDSDSDTKA KKKSFHKPPP TSLKSPYHSK BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 ---------- ---------- --------KA KRKSFHRPPP TSPKSPYHSK 51 100 bmy_17121T0/1-754 ---------- --------MG FVTRTWRRAC HMGT--FQK- ---------- ENSP00000385597/1-695 PRKVASWRSL RTAGSMPLGG RASLTPQKLW -LGT--AKPG SLTQALNSPL ENSBTAP00000019288/1-694 PRKVASWRSL RTAASMPLGG RMSLTPQKLC -LGSSKFKPG SLTPALTSDL BACU005503/1-216 ---------- ---------- -MSLTPQKLW -LGS--SKQ- ---------- ENSTTRP00000009163/1-625 PRKVASWRSL RTAGSAPLGS QMSLTPQKLW -LGS--SKQG SLTPALKSDL 101 150 bmy_17121T0/1-754 ---CCWQ--- ---------- ---------- ---------- --YR------ ENSP00000385597/1-695 TWEHAWTGVP GGTPDCLTDT FRVKRPHLRR SASNGHVPGT PVYREKEDMY ENSBTAP00000019288/1-694 TLDCAWTHSP SSAPDFVTEA LRMKRSNLRR SASHGYVPGN PVYREKEDMY BACU005503/1-216 ---------- ---------- ---------- ----GYVPGT PVYREKEDMY ENSTTRP00000009163/1-625 TLERAWTNTP SSTPDDLTEA ERMQRSNLRR SASHGYVPGT PVYREMEGMY 151 200 bmy_17121T0/1-754 ---------- ---------- ---------- ---------- ---------- ENSP00000385597/1-695 DEIIELKKSL HVQKSDVDLM RTKLRRLEEE NSRKDRQIEQ LLDPSRGTDF ENSBTAP00000019288/1-694 DEIIELKKSL NMQKSDVDLM RTKLRRLEEE NSRKDRQIEQ LLDASRGPDF BACU005503/1-216 DEIIELKKSL HMQKSNVDLM RTKLRRLEEE NSRKDRQIEQ LLDPSRGPDF ENSTTRP00000009163/1-625 DEIIELKKSL HVHKSNMDLM RTKLRRLEEE NSRKDRQIEQ LLDPSRGPDF 201 250 bmy_17121T0/1-754 ---LVEQRLS VAGVVSGLKQ RILKLEQRCK EKDHTIDKLQ TDMKTTNLEE ENSP00000385597/1-695 VRTLAEKRPD ASWVINGLKQ RILKLEQQCK EKDGTISKLQ TDMKTTNLEE ENSBTAP00000019288/1-694 VRTLAEKRPD AGWVINGLKQ RVLKLEQQCK EKDNIINKLQ TDVKTTNLEE BACU005503/1-216 VRTLAEKRPD TGWVVSGLKQ RILKLEQRCK EKDHTIDKLQ TDMKTTNLEE ENSTTRP00000009163/1-625 VRTLAEKRPD TGWVISGLKQ RILKLEQQCK EKNHTIDKLQ TDMKTTNLEE 251 300 bmy_17121T0/1-754 MRIAMETYYE EIHRLQTLLA SSETTGKKPP AENKIGLKRQ KKMSSVLLRL ENSP00000385597/1-695 MRIAMETYYE EVHRLQTLLA SSETTGKKPL GEKKTGAKRQ KKMGSALLSL ENSBTAP00000019288/1-694 MRIAMETYYE EIHRLHGLLA SSEMTGKRPP VEKKIGLKRQ KKMSSALLSL BACU005503/1-216 MRIAMETYYE EIHRLQTLLA SSETTGKKPP AEKKIGLKRQ KKMSSALLSL ENSTTRP00000009163/1-625 MRIAMETYYE EIHRLQTLLA SSETTGKKPP VEKNVGLKRQ KRMSSALLSL 301 350 bmy_17121T0/1-754 SRSVQELTEE NQSLREDLDR VLSNSPTAST IKENLRSVYK FSRIKLVRKE ENSP00000385597/1-695 SRSVQELTEE NQSLKEDLDR VLSTSPTISK TQGYV----E WSKPRLLRR- ENSBTAP00000019288/1-694 SRSVQELTEE NQSLKEDLDR MLSNSPTASK IKGYT----D WSKPRLVRR- BACU005503/1-216 SQSVQELTEE NQSLKEDLDR VLSSSPTASK IK-------- ---------- ENSTTRP00000009163/1-625 SRSVQELTEE NQSLKEDLDR VLSDSPTVSK IKGSV----E WSKPRLLRR- 351 400 bmy_17121T0/1-754 GRPEVVQKPV GQRSPTRRDA DISGNLKKIS LMESPKPHAS EVLGSTPPAR ENSP00000385597/1-695 ---------- ---------- -IVELEKKLS VMESSKSHAA EPVRSHPPAC ENSBTAP00000019288/1-694 ---------- ---------- -IAELEKKLS SMESPKPQAS EAARSTSLTP BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 ---------- ---------- -IAELDKKIS LMESPKSHAS EVVLSTPPAH 401 450 bmy_17121T0/1-754 SASSSTVHRQ PHPDGQEESE RLRGVVKRLK GERSALHTQL QEREEEIQAL ENSP00000385597/1-695 LASSSALHRQ PRGDRNKDHE RLRGAVRDLK EERTALQEQL LQRDLEVKQL ENSBTAP00000019288/1-694 SASSPTLHLQ -------ENE HLHGAVKSLK GERSALHTQL QERDLEVKQL BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 SVSSSTVHRQ PRPDRQEESE RLRGFVKSLK GERNALHTRL QERDLEVKQL 451 500 bmy_17121T0/1-754 TRKFQELEES KKGEEENAVE MSPEFAPRGA CSVSVRQGRP AWPGRPDISR ENSP00000385597/1-695 LQAKADLEKE LE-------- ---------- ---CAREGEE ERREREEVLR ENSBTAP00000019288/1-694 LQTKAELEKE LE-------- ---------- ---SMKEGER ERREREKALR BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 LQIKADLEKE LE-------- ---------- ---NMKEGEK EGREREEALR 501 550 bmy_17121T0/1-754 YVYFNRSTKE KEKSPKRECG EADKRVSLQL QVETNPRPPT DSAKERWLSW ENSP00000385597/1-695 EEIQTLTSKL QELQEMKK-E EKEDCPEVPH KAQELPAPTP SS-------- ENSBTAP00000019288/1-694 EEVQTLTRKF QELEGSKK-D KEDEPVAAAP QTHEEPSQPP SPTA------ BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 EEIQALTRKF QELEESKK-G GEEDPEETSP ETREAPRPP- ---------- 551 600 bmy_17121T0/1-754 CVLAGAPWGH CPPVQETGHP ARWALFRRPL PTQTPALSAP GGCGAGPLTA ENSP00000385597/1-695 --------RH CEQDWP---- ---------- ---------- ---------- ENSBTAP00000019288/1-694 --------SP SQPDAE---- ---------- ---------- ---------- BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 --------GP SQTDSE---- ---------- ---------- ---------- 601 650 bmy_17121T0/1-754 RRVVGRAALF VSSTLLSQWG ARGADRPVPC LPQAALTPGG HPAHLSLREK ENSP00000385597/1-695 ---------- ------PDSS EEGLPR---- -PRSPCSDGR RDAAARVLQA ENSBTAP00000019288/1-694 ---------- ------PDWN QGGSSW---- -PPSTCSEGR RDEAARVLQR BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 ---------- ------LDTS EGGSSR---- -PLSGCSEGR RDAAARLLQR 651 700 bmy_17121T0/1-754 KYFPRPPELA GCRLWVQRPC KHGTELRGLP GGSGPSAALR WGSRDGRLVR ENSP00000385597/1-695 QW-------K VYKHKKKKAV L--------- --DEA-AVVL QAAFRGHLTR ENSBTAP00000019288/1-694 RW-------K GYQRQKERAL L--------- --DEA-ATVL QAAFRGHLAR BACU005503/1-216 ---------- ---VWR---- ---------- ---------- ---------- ENSTTRP00000009163/1-625 RW-------K GHQHWKKQAV L--------- --DEPRAAVL QAAFRAHPAR 701 750 bmy_17121T0/1-754 NRESLPRGCS SEDSGLGDGT AGLRVGSQTR GWAGSVQPLC GHPERIPHVI ENSP00000385597/1-695 TKLLASKAHG SEPPSV---- ---------P GLPDQSSPVP RVPSPIAQAT ENSBTAP00000019288/1-694 ARLLSRAACV SEPPRV---- ---------P SPPTQDSPEP RIPSPAAQAE BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 VRPLSSGVCS PDPPAV---- ---------P SPPTQDSPEP RVPSPVVQAE 751 800 bmy_17121T0/1-754 GQLWLGEGLP HVKPKTTPSR WSLRVTSPRS RPGTADAPVA AWASAVIRLP ENSP00000385597/1-695 GSPVQEEAIV IIQSALRAHL ARARHSATGK RTTTAASTRR RSASATHGDA ENSBTAP00000019288/1-694 GDPWQEEAVT IIQSAFRAHL ARARHSDPGP GASTAAVP-D RPAQPPPRAP BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 GDPWQEEAIT IIQSAFRAHL ARARHSAAGP RAAPAAFP-D RPAWAPHSAP 801 850 bmy_17121T0/1-754 VTVTAACFLL RCCRRVCISS ISLSRSPLGM GGGQGAVGEG RVPDSTFPSL ENSP00000385597/1-695 ---------- --SSPPFLAA LP-DPSPSGP QALAPLPGDD VNSDD----- ENSBTAP00000019288/1-694 ---------- --CSPPCPVA GPAEPPVSVL QPMAPTPAED VNSDD----- BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 ---------- --SSPPFPAA SP-------- ---------- ---------- 851 900 bmy_17121T0/1-754 LAVAGEGPRD EYEKKGRSGR VLLVQELPQQ RFPTDLRGPP RVHPALRPSL ENSP00000385597/1-695 ---------- -------SDD IVIAPSLPTK NFPV------ ---------- ENSBTAP00000019288/1-694 ---------- -------SDE IVLAPSLPTR KSACLP---- ---------- BACU005503/1-216 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009163/1-625 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_17121T0/1-754 QPLLVIAFHL GFHARGSWPS EVSAKRAATV PE ENSP00000385597/1-695 ---------- ---------- ---------- -- ENSBTAP00000019288/1-694 ---------- ---------- ---------- -- BACU005503/1-216 ---------- ---------- ---------- -- ENSTTRP00000009163/1-625 ---------- ---------- ---------- --