KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:24 2014 Check: 00 .. Name: ENSTTRP00000013537/1-1335 Len: 1342 Check: 5117 Weight: 1.00 Name: ENSP00000382717/1-1342 Len: 1342 Check: 2421 Weight: 1.00 Name: ENSBTAP00000019294/1-1342 Len: 1342 Check: 5608 Weight: 1.00 Name: bmy_07381T0/1-763 Len: 1342 Check: 2662 Weight: 1.00 Name: BACU007642/1-1342 Len: 1342 Check: 5726 Weight: 1.00 // 1 50 ENSTTRP00000013537/1-1335 --RVFSLLEK TWLGTPIKFT WQKTSGNYLA VTGADHIVKI FDRHGQKRSE ENSP00000382717/1-1342 MKRIFSLLEK TWLGAPIQFA WQKTSGNYLA VTGADYIVKI FDRHGQKRSE ENSBTAP00000019294/1-1342 MKRVFSLLEK TWLGTPIQFT WQKTSGNYLA VTGADHIVKI FDRHGQKRSE bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 MKRVFSLLEK TWLGTPIKFT WQKTSGNYLA VTGADHIVKI FDRHGQKRSE 51 100 ENSTTRP00000013537/1-1335 INLSGNCVAM DWDKDGDILA VIAEKSSCIY LWDANTNKTS QLDSGMRDQL ENSP00000382717/1-1342 INLPGNCVAM DWDKDGDVLA VIAEKSSCIY LWDANTNKTS QLDNGMRDQM ENSBTAP00000019294/1-1342 INLSGNCVTM DWDKDGDILA VIAEKSSCIY LWDANTNKTS QLDSGLRDQL bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 INLSGNCVAM DWDKDGDILA VIAEKSSCIY LWDANTNKTS QLDSGMRDQL 101 150 ENSTTRP00000013537/1-1335 SFLLWSKFGS FLAVGTVKGN LLIYNRQTSR KIPVLGKHTK RITCGCWNAE ENSP00000382717/1-1342 SFLLWSKVGS FLAVGTVKGN LLIYNHQTSR KIPVLGKHTK RITCGCWNAE ENSBTAP00000019294/1-1342 SFLLWSKFGS FLAVGTVKGN LLIYNHQTSR KIPVIGKHTK KITCGCWNAE bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 SFLLWSKFGS FLAVGTVKGN LLIYNRQTSR KIPVLGKHTK RITCGCWNAE 151 200 ENSTTRP00000013537/1-1335 NMLALGGEDK MITVSNQEGD TIRQTPVRAE PSNMQFSMMK TDDRTSTAES ENSP00000382717/1-1342 NLLALGGEDK MITVSNQEGD TIRQTQVRSE PSNMQFFLMK MDDRTSAAES ENSBTAP00000019294/1-1342 NMLALGGEDK MITVSNQEGD TIRQIPVRSE PSDMQFSMMK TDDRTSTAES bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 NMLALGGEDK MITVSNQEGD TIRQTPVRSE PSDMQFSMMK TDDRTSTAES 201 250 ENSTTRP00000013537/1-1335 TISVVVGKKT LFLFNLNEPD SPIDLEFQQR YGNIVCYSWY GDGYILIGFS ENSP00000382717/1-1342 MISVVLGKKT LFFLNLNEPD NPADLEFQQD FGNIVCYNWY GDGRIMIGFS ENSBTAP00000019294/1-1342 TISVVVGKKT LFLFNLNEPD NPIDLEFQQH YGNIVCYSWY GDGYIMIGFS bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 TISVVVGKKT LFLFNLNEPD SPIDLEFQQR YGNIVCYSWY GDGYILIGFS 251 300 ENSTTRP00000013537/1-1335 RGIFVVISTH IREIGQEIFQ ARDHKDSLTS IAVSQTLNKA ATCGDNCIKI ENSP00000382717/1-1342 CGHFVVISTH TGELGQEIFQ ARNHKDNLTS IAVSQTLNKV ATCGDNCIKI ENSBTAP00000019294/1-1342 RGTFVVISTH IREIGQEIFQ ARDHKDSLTS IAVSQTLNKA ATCGDNCIKI bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 RGIFVVISTH IREIGQEIFQ ARDHKDSLTS IAVSQTLNKA ATCGDNCIKI 301 350 ENSTTRP00000013537/1-1335 HDLAELKDMY AIINLDDENK GLGTLSWTDD GQLLALSTQR GSLHVFLTKL ENSP00000382717/1-1342 QDLVDLKDMY VILNLDEENK GLGTLSWTDD GQLLALSTQR GSLHVFLTKL ENSBTAP00000019294/1-1342 HDLAELKDMY AIVNLDDEHK GLSTLSWTDD GQLLALSTQR GSLHVFLTKL bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 HDLAELKDMY AIINLDDENK GLGTLSWTDD GQLLALSTQR GSLHVFLTKL 351 400 ENSTTRP00000013537/1-1335 PVLGDACSTR IAYLTSLLEV TIANPVEGEL PVTVSVDVEP NFVAVGLYHL ENSP00000382717/1-1342 PILGDACSTR IAYLTSLLEV TVANPVEGEL PITVSVDVEP NFVAVGLYHL ENSBTAP00000019294/1-1342 PILGDACSTR IAYLTSLLEV TVANPVEGEL PITVSVDVEP NFVAVGLYHL bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 PILGDACSTR IAYLTSLLEV TIANPVEGEL PVTVSVDVEP NFVAVGLYHL 401 450 ENSTTRP00000013537/1-1335 AVGMNNRAWF YVLGENAVKK LKDVEYLGTV ASVCLHSDYA AALFEGKVQL ENSP00000382717/1-1342 AVGMNNRAWF YVLGENAVKK LKDMEYLGTV ASICLHSDYA AALFEGKVQL ENSBTAP00000019294/1-1342 AVGMNNRAWF YVLGENAVKK LKDVEYLGTV ASVCLYSDYA SALFEGKVQL bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 AVGMNNRAWF YVLGENAVKK LKDVEYLGTV ASVCLHSDYA AALFEGKVQL 451 500 ENSTTRP00000013537/1-1335 HLIESEMLDT QEERETRLFP AVDDKCRILC HALTGDFLIY GTDTGVIQYF ENSP00000382717/1-1342 HLIESEILDA QEERETRLFP AVDDKCRILC HALTSDFLIY GTDTGVVQYF ENSBTAP00000019294/1-1342 HLIESEMLDT QEERETRLFP AVDDKCRILC HALTGDFLIY GTDTGVIQYF bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 HLIESETLDA QEERETRLFP AVDDKCRILC HALTGDFLIY GTDTGVIQYF 501 550 ENSTTRP00000013537/1-1335 YIEDWQFVND YRHPVSVKKI FPDPNGTRLV FIDEKSDGYV YCPXXXXXXX ENSP00000382717/1-1342 YIEDWQFVND YRHPVSVKKI FPDPNGTRLV FIDEKSDGFV YCPVNDATYE ENSBTAP00000019294/1-1342 YIEDWQFVND YRHPDSVKKI FPDPPGTRLV FIDEKSDGYV YCPVNDATYE bmy_07381T0/1-763 ---------- ---------- ---------- ---------- ---------- BACU007642/1-1342 YIEDWQFVND YRHPVSVKKI FPDPNGTRLV FIDEKSDGYV YCPVNDATYE 551 600 ENSTTRP00000013537/1-1335 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000382717/1-1342 IPDFSPTIKG VLWENWPMDK GVFIAYDDDK VYTYVFHKDT IQGAKVILAG ENSBTAP00000019294/1-1342 IPDFSPTIKG VLWENWPMDK GVFIAYDDDK VYTYVFHKDT IQGSKVILAG bmy_07381T0/1-763 ---------- -------MDK GVFIAYDDDK VYTYVFHKDT IQGSKVILAG BACU007642/1-1342 IPDFSPTIKG VLWENWPMDK GVFIAYDDDK VYTYVFHKDT IQGSKVILAG 601 650 ENSTTRP00000013537/1-1335 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000382717/1-1342 STKVPFAHKP LLLYNGELTC QTQSGKVNNI YLSTHGFLSN LKDTGPDELR ENSBTAP00000019294/1-1342 GTKVPFSHKP LLLYNGELTC QTQSGKINNI YLSTHRFLDT LKDVGPHELR bmy_07381T0/1-763 GTKVPFCHKP LLLYNGELTC QTQSGKINNI NLSTHSFLHS LKDVGLNDLR BACU007642/1-1342 GTKVPFCHKP LLLYNGELTC QTQSGKINNI YLSTHSFLHS LKDVGLNDLR 651 700 ENSTTRP00000013537/1-1335 XXXXXXXXXX XFSDAWEMCK ILNDHAAWNE LARACLHHME VEFAIRVYRT ENSP00000382717/1-1342 PMLAQNLMLK RFSDAWEMCR ILNDEAAWNE LARACLHHME VEFAIRVYRR ENSBTAP00000019294/1-1342 QVLTQTLMLK RFPDAWELCK ILNDQAAWNE LARACLHHME VEFAIRVYRT bmy_07381T0/1-763 QMLTQTLMLK RFSDAWEMCK ILNDHAAWNE LARACLHHME VEFAIRVYRT BACU007642/1-1342 QMLTQTLTLK RFSDAWEMCK TLNDHAAWNE LARACLHHME VEFAIRVYRT 701 750 ENSTTRP00000013537/1-1335 IGNVGMVMSL EQIKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000382717/1-1342 IGNVGIVMSL EQIKGIEDYN LLAGHLAMFT NDYNLAQDLY LASSCPIAAL ENSBTAP00000019294/1-1342 IGNVGMVMSL EQIKGIEDYN LLAGHLAMFS DDFNLAQDLY LASSCPVAAL bmy_07381T0/1-763 IGNVGMVMSL EQIKGIEDYN LLAGHLAMFT NDFNLAQDLY LASSCPIAAL BACU007642/1-1342 IGNVGMVMSL EQIKGIEDYN LLAGHLAMFT NDFNLAQDLY LASSCPIAAL 751 800 ENSTTRP00000013537/1-1335 XMRRDLQHWD SALQLAKRLA PDQIPFISKE YAIQLEFTGD YVNALAHYEK ENSP00000382717/1-1342 EMRRDLQHWD SALQLAKHLA PDQIPFISKE YAIQLEFAGD YVNALAHYEK ENSBTAP00000019294/1-1342 EMRRDLQHWD SALQLAKRLA PDQIPFISKE YAIQLEFTGD YANALAHYEK bmy_07381T0/1-763 E--KKLDNFT TLFEI---IG DTLRNFQNLD W-------GD YVNALAHYEK BACU007642/1-1342 EMRRDLQHWD SALQLAKRLA PDQIPFISKE YAIQLEFTGD YVNALAHYEK 801 850 ENSTTRP00000013537/1-1335 GITGDNKEHD EVCLAGVAQM SIRMGDIRRG VSLALKHPSR VLKRDCGAIL ENSP00000382717/1-1342 GITGDNKEHD EACLAGVAQM SIRMGDIRRG VNQALKHPSR VLKRDCGAIL ENSBTAP00000019294/1-1342 GITGDNKEHD EVCLAGVAQM SIRMGDIRRG VNQALKHPSR VLKRDCGAIL bmy_07381T0/1-763 GITGDNKEHD EVCLAGVAQM SIRMGDIRRG VSLALKHPSR VLKRDCGAIL BACU007642/1-1342 GITGDNKEHD EVCLAGVAQM SIRMGDIRRG VSLALKHPSR VLKRDCGAIL 851 900 ENSTTRP00000013537/1-1335 ENMKQFSEAA QLYEKGLYYD KAASVYIRCK NWAKVGELLP HVSSPKIHLQ ENSP00000382717/1-1342 ENMKQFSEAA QLYEKGLYYD KAASVYIRSK NWAKVGDLLP HVSSPKIHLQ ENSBTAP00000019294/1-1342 ENMKQFSEAA QLYEKGLYYD KAASVYIRCK NWAKVGELLP HVSSPKIHLQ bmy_07381T0/1-763 ENMKQFSEAA QLYEKGLYYD KAASVYIRCK NWAKVGELLP HVSSPKIHLQ BACU007642/1-1342 ENMKQFSEAA QLYEKGLYYD KAASVYIRCK NWAKVGELLP HVSSPKIHLQ 901 950 ENSTTRP00000013537/1-1335 YAKAKEADGR YKEAVVAYEN AKQWNSVIRI YLDHLNNPEK AVSIVRETQS ENSP00000382717/1-1342 YAKAKEADGR YKEAVVAYEN AKQWQSVIRI YLDHLNNPEK AVNIVRETQS ENSBTAP00000019294/1-1342 YAKAKEADGR YKEAVVAYEN AKQWNSVIRI YLDHLNNPEK AVSIVRETQS bmy_07381T0/1-763 YAKAKEADGR YKEAVVAYEN AKQWNSVIRI YLDHLNNPEK AVSVVRETQS BACU007642/1-1342 YAKAKEADGR YKEAVVAYEN AKQWNSVIRI YLDHLNNPEK AVSVVRETQS 951 1000 ENSTTRP00000013537/1-1335 LDGAKMVARF FLQLGDYGSA IQFLVMSKCN NEAFTLAQQH NKMEIYADII ENSP00000382717/1-1342 LDGAKMVARF FLQLGDYGSA IQFLVMSKCN NEAFTLAQQH NKMEIYADII ENSBTAP00000019294/1-1342 LEGAKLVARF FLQLGDYGSA IQFLVISKCN NEAFTLAQQH NKMEIYADII bmy_07381T0/1-763 LDGAKMVARF FLQLGDYGSA IQFLVMSKCN NEAFTLAQQH KKMEIYADII BACU007642/1-1342 LDGAKMVARF FLQLGDYGSA IQFLVMSKCN NEAFTLAQQH NKMEIYADII 1001 1050 ENSTTRP00000013537/1-1335 GSEDTTNEDY QSI-LYFEGE KRHFQAGKFF LLCGQYSRAL KHLLKCPSSE ENSP00000382717/1-1342 GSEDTTNEDY QSIALYFEGE KRYLQAGKFF LLCGQYSRAL KHFLKCPSSE ENSBTAP00000019294/1-1342 GSENTTNEDY QSIALYFEGE KRHFQAGKFF LLCGQYSRAL KHFLKCPSSE bmy_07381T0/1-763 GSEDTTNEDY QSIALYFEGE KRHFQAGKFF LLCGQYSRAL KHLLKCPSSE BACU007642/1-1342 GSEDTTNEDY QSIALYFEGE KRHFQAGKFF LLCGQYSRAL KHLLKCPSSE 1051 1100 ENSTTRP00000013537/1-1335 DNAAIEMAIE TVGQAKDELL TSQLIDHLMG ESDGMPKDAK YLFRLYMALK ENSP00000382717/1-1342 DNVAIEMAIE TVGQAKDELL TNQLIDHLLG ENDGMPKDAK YLFRLYMALK ENSBTAP00000019294/1-1342 DNAAIEMAIE TVGQAKDELL TSQLIDHLMG ESDGMPKDAK YLFRLYMALK bmy_07381T0/1-763 DNAAIEMAIE TVGQAKDELL TSQLIDHLMG ESDGMPKDAK YLFRLYMALK BACU007642/1-1342 DNAAIEMAIE TVGQAKDELL TSQLIDHLMG ESDGMPKDAK YLFRLYMALK 1101 1150 ENSTTRP00000013537/1-1335 QYREAARTAI IIAREEQSAG NYRNAHDVLF SMYAELKSQK IKIPSEMATN ENSP00000382717/1-1342 QYREAAQTAI IIAREEQSAG NYRNAHDVLF SMYAELKSQK IKIPSEMATN ENSBTAP00000019294/1-1342 QYREAARTAI IIAREEQSAG NYRNAHDVLF SMYAELKSQK IKIPSEMATN bmy_07381T0/1-763 QYREAARTAI IIAREEQSAG NYRNAHDVLF SMYAELKSQK IKIPSEMATN BACU007642/1-1342 QYREAARTAI IIAREEQSAG NYRNAHDVLF SMYAELKSQK IKIPSEMATN 1151 1200 ENSTTRP00000013537/1-1335 LMILHSYILV KIHVKNGDHM KGARMLIRVA NNISKFPSHI VPILTSTVIE ENSP00000382717/1-1342 LMILHSYILV KIHVKNGDHM KGARMLIRVA NNISKFPSHI VPILTSTVIE ENSBTAP00000019294/1-1342 LMILHSYILV RIHVKNGDHM KGARMLIRVA NNISKFPSHI VPILTSTVIE bmy_07381T0/1-763 LMILHSYILV KIHVKNGDHV KGARMLIRVA NNISKFPSHI VPILTSTVIE BACU007642/1-1342 LMILHSYILV KIHVKNGNHM KGARMLIRVA NNISKFPSHI VPILTSTVIE 1201 1250 ENSTTRP00000013537/1-1335 CHRAGLKNSA FSFAAMLMRP EYRNKIDVKY KKKIEAMVRR PDTSETEEAT ENSP00000382717/1-1342 CHRAGLKNSA FSFAAMLMRP EYRSKIDAKY KKKIEGMVRR PDISEIEEAT ENSBTAP00000019294/1-1342 CHRAGLKNSA FGFAAMLMRP EYRNKIDAKY KKKIEAMVRR PDTSETEEAT bmy_07381T0/1-763 CHRAGLKNSA FSFAAMLMRP EYRNKIDVKY KKKIEAMVRR PDTSETEEAT BACU007642/1-1342 CHRAGLKNSA FSFAAMLMRP EYRNKIDVKY KKKIEAMVRR PDTSETEEAT 1251 1300 ENSTTRP00000013537/1-1335 TPCPFCEFLL PECELLCPGC KNNIPYCIAT GRHMLKDDWT VCPHCDFPAL ENSP00000382717/1-1342 TPCPFCKFLL PECELLCPGC KNSIPYCIAT GRHMLKDDWT VCPHCDFPAL ENSBTAP00000019294/1-1342 TPCPFCEFLL PECELLCPGC KNNIPYCIAT GRHMLKDDWA VCPHCDFPAL bmy_07381T0/1-763 TPCPFCEFLL PECELLCPGC KNNIPYCIAT GRHMLQDDWT VCPHCDFPAL BACU007642/1-1342 TPCPFCEFLL PECELLCPGC KNNIPYCIAT GRHMLKDDWT VCPHCDFPAL 1301 1350 ENSTTRP00000013537/1-1335 YSEFKIM-NT ESTCPMCSER LN-AQL-KIS DCTQ-LRTEV EQ ENSP00000382717/1-1342 YSELKIMLNT ESTCPMCSER LNAAQLKKIS DCTQYLRTEE EL ENSBTAP00000019294/1-1342 YSEFKVMLST ESTCPMCSER LNLDQLKKTS DCTQYLRTEV EQ bmy_07381T0/1-763 YSEFKIMLNT ESTCPMCSER LNFAQLKKIS DCTQYLRTEV EQ BACU007642/1-1342 YSEFKIMLNT ESTCPMCSER LNFAQLKKIS DCTQYLRTEV EQ