KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:28 2014 Check: 00 .. Name: ENSP00000347409/1-732 Len: 774 Check: 808 Weight: 1.00 Name: ENSTTRP00000007424/1-730 Len: 774 Check: 6121 Weight: 1.00 Name: ENSBTAP00000019317/1-730 Len: 774 Check: 4134 Weight: 1.00 Name: bmy_20632T0/1-768 Len: 774 Check: 8084 Weight: 1.00 Name: BACU010948/1-582 Len: 774 Check: 5514 Weight: 1.00 // 1 50 ENSP00000347409/1-732 ---------- ---------- ---------- ----MEGGDQ SEEEPRERSQ ENSTTRP00000007424/1-730 ---------- ---------- ---------- ----TEGGDS GGE--PWGLS ENSBTAP00000019317/1-730 ---------- ---------- ---------- ------GGRK SQEESPSSSQ bmy_20632T0/1-768 MRASVAVHLV STAVCFAVQL LCPPSSSFSS GGWRRVGESH GVRASEWSGA BACU010948/1-582 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000347409/1-732 AGGMGTLWSQ ESTPEERLPV EGSRPWAVAR RVLTA-ILIL GLLLCFSVL- ENSTTRP00000007424/1-730 QSGAGTRRRR ERSPEEGLPA VHGRQWAMAR RALMT-VLLF SLILWFSV-- ENSBTAP00000019317/1-730 GSKEGWVWEN KRSPEEELHT AQDGWWQMTF RALRT-LLLF SIILGLSLL- bmy_20632T0/1-768 SQETGEISRR GAAHCTERTV GDGQASANDS PAFQSNPWWF SAALGLRFPG BACU010948/1-582 ---------- ---------- -------MAR RALMT-VLLF SLILGGSLL- 101 150 ENSP00000347409/1-732 LF-YNFQNCG ----PRPCET SVCLDLRDHY LASGNTSVAP CTDFFSFACG ENSTTRP00000007424/1-730 LWGYVFQGCG ----PXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000019317/1-730 LWGYVFQGCG ----PSPCKT SVCQDLLDLY LASGNTSVAP CTDFFSFACG bmy_20632T0/1-768 LW-----SCS ELFPTAHCET PVCRDLLSLY LASGNTSVAP CTDFFSFACG BACU010948/1-582 LWGYVFQGCG ----PAHCET PVCRDLLSLY LASGNTSVAP CTDFFSFACG 151 200 ENSP00000347409/1-732 RAKETNNSFQ ELATKNKNRL RRILEVQNSW HPGS-GEEKA FQFYNSCMDT ENSTTRP00000007424/1-730 XXXXXXXXXX XXXXXXXXXX XXXXXAPGSW RLDS-GEEKA FQFYSSCMDT ENSBTAP00000019317/1-730 NINRTGSPFQ ALAEENKRRV RRILETPGSW RLAP-GEEKA FEFYNSCMNM bmy_20632T0/1-768 NTNRTTSSFQ ALAKENKRRL QRILEAPGSW RLDFSGEEKA FQFYNSCMDT BACU010948/1-582 NTNRTTSSFQ ALAKENKHRL QRILEAPGSW RLDFSGEEKA FQFYNSCMDT 201 250 ENSP00000347409/1-732 LAIEAAGTGP LRQVIEELGG WRISGKWTSL NFNRTLRLLM SQYGHFPFFR ENSTTRP00000007424/1-730 GAIEGAGAGP LRQVIEELGG WPISGDWTPL DFNRTLSLLM SQYGHFPFFR ENSBTAP00000019317/1-730 SAIEAAGASP FRQVIEELGG WSIFGNWTPL DFNQTLSLLM SQYGHFPFFR bmy_20632T0/1-768 GAIEAAGAGP LRQVIEELGG WPVSGDWTPL DFNRTLSLLM SQYGHFPFFR BACU010948/1-582 GAIEAAGAGP LRQVIEELGG WPISGNWTPL DFNRTLSLLM SQYGHFPFFR 251 300 ENSP00000347409/1-732 AYLGPHPASP HTPVIQIDQP EFDVPLKQDQ EQKIYAQIFR EYLTYLNQLG ENSTTRP00000007424/1-730 AYLRPLPTPP YTPVIQXXXX XXXXXXXXXX XXXXXXXILR EYLTYLNRLG ENSBTAP00000019317/1-730 AYLKPLPTPP YLPVIQIDQP ELDVLLKQKQ EPN-YAQILR EYLSYLNRLV bmy_20632T0/1-768 AYLRPLPTPP YTPVIQIDQP EFDVPLKQKQ EMN-YAQILR EYLTYLNRLG BACU010948/1-582 AYLRPLPTPP YTPVIQIDQP EFDVPLKQKQ EMN-YAQILR EYLTYLNRLG 301 350 ENSP00000347409/1-732 TLLGGDPSKV QEHSSLSISI TSRLFQFLRP LEQRRAQGKL FQMVTIDQLK ENSTTRP00000007424/1-730 TLLGGDPNKV GEHASFSISI NSQLYQFLRP PEQQQAQGKL FQMVTIDQLQ ENSBTAP00000019317/1-730 TLLGGDPTKV GNDASYSLFI NSQLNQFLRP GEQQQAQGKV FEMVTIDQLQ bmy_20632T0/1-768 TLLGGDPNKV GEHASFSISI NSQLYQFLRT PEQQQAQGKL FQVVTIDQLQ BACU010948/1-582 TLLGGDPNKV GEHASFSISI NSQLYQFLRT PEQQQAQGKL FQMVTIDQLQ 351 400 ENSP00000347409/1-732 EMAPAIDWLS CLQATFTPMS LSPSQSLVVH DVEYLKNMSQ LVEEMLLKQR ENSTTRP00000007424/1-730 EMAPAIDWLS CLQATFAPMS LSPSHPVAVH DLEYLKNMSQ LVEKQLSKHR ENSBTAP00000019317/1-730 RVAPAIDWLS CLQATFAPMS LSPSYCVAVH DLEYLKNMSQ LIEKDLMKHR bmy_20632T0/1-768 EMAPAIDWLS CLQATFAPMS LSPSHPVAVH DVEYLKNMSQ LVEKQLSKHR BACU010948/1-582 EMAPAIDWLS CLQATFAPMS LSPSHPVAVH DLEYLKNMSQ LVEKQLSKHR 401 450 ENSP00000347409/1-732 DFLQSHMILG LVVTLSPALD SQFQEARRKL SQKLRELTEQ PPMPARPRWM ENSTTRP00000007424/1-730 DFLQSHMILG LVGTLSPALD SKFQEARRLL SQKLGELTGR PPTXXXXXXX ENSBTAP00000019317/1-730 DFLQSHIIFG LVKTLSPALD SQFQEAHRSL SQKVGELTGR PPMPVHPRWM bmy_20632T0/1-768 DFLQSHMILG LVGTLSPALD SKFQEARRLL SQKLGELTGR PPTPAHPRWM BACU010948/1-582 DFLQSHMILG LVGTLSPALD SKFQEARRLL SQKLGELTGR PPTPAHPRWM 451 500 ENSP00000347409/1-732 KCVEETGTFF EPTLAALFVR EAFGPSTRSA AMKLFTAIRD ALITRLRNLP ENSTTRP00000007424/1-730 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX AMELFTAIKD ALIARFQMLP ENSBTAP00000019317/1-730 TCVEKTEAFF EPTLATLFIK ETFKPSTHSA AMELFTTIKD TFISHLHTVP bmy_20632T0/1-768 TCVEKTEAFF KPTLAALFVR EAFGPSTQSA AMELFTAIKD ALIARFQTLP BACU010948/1-582 TCVEKTEAFF KPTLAALFVR EAFGPSTRSA AMELFTAIKD ALIARFQTLP 501 550 ENSP00000347409/1-732 WMNEETQNMA QDKVAQLQVE MGASEWALKP ELARQEYNDI QLGSSFLQSV ENSTTRP00000007424/1-730 WMDEETRAKV QDKVTQLQVK MGAPEWALKP DPARQEYNDI RLGPSFLQSF ENSBTAP00000019317/1-730 WMDRETRAEA QDRLTQLQVK MGPSEWALKP DPARQEYDDV QLGPSFLQTF bmy_20632T0/1-768 WMDEETRAKA QDKVTQLQVK MGAPEWALKP DPARQEYNDI QLGXSFLQSF BACU010948/1-582 WMDEETRAKA QDKVAQLQVK MGAPEWALKP DPARQEYND- ---------- 551 600 ENSP00000347409/1-732 LSCVRSLRAR IVQSFLQPHP QHRWKVSPWD VNAYYSVSDH VVVFPAGLLQ ENSTTRP00000007424/1-730 LSCVRSRRAR IIRSFLQPFP NHRWQVLPWG VNAYYSIPDH VVVFPAGLLQ ENSBTAP00000019317/1-730 LSCIRSRQAR VIQGFLQPFS SHRWQVLPWG LKASYSIPDH VMVFPAGLLQ bmy_20632T0/1-768 LSCVRSRRAR IIRSFLQPFP NHRWQVLPWG VNAYYSIPDH VVVFPAGLLQ BACU010948/1-582 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000347409/1-732 PPFFHPGYPR AVNFGAAGSI MAHELLHIFY QLLLPGGCLA CDNHALQEAH ENSTTRP00000007424/1-730 PPFFHPGYPR AVNFGAAGSV MAHELLHIFY QLLFPGGCPA CDTHALQGAL ENSBTAP00000019317/1-730 PPFFHPGYPR AVNFGAAGSI MARELLHIFD QLLLPGGCPA CDTRDLQKAL bmy_20632T0/1-768 PPFFHPGYPR AVNFGAAGSI MAHELLHIFY QLLFPGGCPA CDTHALQGAL BACU010948/1-582 ---------- ---------- ---------- ---------- -------GAL 651 700 ENSP00000347409/1-732 LCLKRHYAAF PLPSRTSFND SLTFLENAAD VGGLAIALQA YSKRLLRHHG ENSTTRP00000007424/1-730 VCLERHYAAF PLPNGTFFNG SRTFLEDAAD TGGLVIALQA YNKRLLWYRG ENSBTAP00000019317/1-730 LCLERLYAAL PSPKGTSFNV SRTLLEDAAD AGALAIALKA YKKRLVLFRG bmy_20632T0/1-768 VCLERHYAAF PLPNGTFFNG SRTFLEDAAD TGGLAIALQA YNKRLLWYRG BACU010948/1-582 VCLEHHYAAF PLPNGTFFNG SRTFLEDAAD TGGLAIALQA YNKRLLWYRG 701 750 ENSP00000347409/1-732 ETVLPSLDLS PQQIFFRSYA QVMCRKPSPQ DSHDTHSPPH LRVHGPLSST ENSTTRP00000007424/1-730 ETTLPNLNLS PWQLFFRSYA QVMCRDPSTQ DPQDTHSPPT LRIHGPLSNS ENSBTAP00000019317/1-730 ETILPNLDLS PRQLFFRSYA QVMCRDPSTQ DPQDIRSPPT LRVHGPLSDS bmy_20632T0/1-768 ETTLPNLNFS PWQLFFRSYA QVMCRGPSTQ DPQDTHSPPT LRIHGPLSNS BACU010948/1-582 ETTLPNLNFS PWQLFFRSYA QVMCRGPSTQ DPQDTHSPPT LRIHGPLSNS 751 800 ENSP00000347409/1-732 PAFARYFRCA RGALLNPSSR CQLW ENSTTRP00000007424/1-730 PAFARHFHCP HGTLMHPSSR CQLW ENSBTAP00000019317/1-730 PAFTRHFRCP QGALLNPPSR CQLW bmy_20632T0/1-768 PAFARHFHCP HGTLMNPSSR CQLW BACU010948/1-582 PAFARHFRCP HGTLMNPSSR CQLW