KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:07:33 2014 Check: 00 .. Name: BACU004027/1-584 Len: 584 Check: 3854 Weight: 1.00 Name: bmy_10577T0/1-486 Len: 584 Check: 728 Weight: 1.00 Name: ENSBTAP00000019352/1-486 Len: 584 Check: 4254 Weight: 1.00 Name: ENSP00000355870/1-488 Len: 584 Check: 9085 Weight: 1.00 // 1 50 BACU004027/1-584 MFAAGLAPFY ASNFSLWSAA YCSSAGPGGC SFPLDPAAVK KPSFCIADIL bmy_10577T0/1-486 MFAAGLAPFY ASNFSLWSAA YCSSAVPGGC SFPLDPAAVK KPSFCIADIL ENSBTAP00000019352/1-486 MFAAGLAPFY ASNFSLWSAA YCSSAGPGGC SFPLDPAAVK KPSFCIADIL ENSP00000355870/1-488 MFAAGLAPFY ASNFSLWSAA YCSSAGPGGC SFPLDPAAVK KPSFCIADIL 51 100 BACU004027/1-584 HAGVGETGAA PEGLAGASAA ALTAHLGSAH PHASFQAAAR SPLRPTPVVA bmy_10577T0/1-486 HAGVGETGAA PEGLAGASAA ALTAHLGSAH PHASFQAAAR SPLRPTPVVA ENSBTAP00000019352/1-486 HAGVGEPGAT PEGLAGASAA ALTAHLGSAH PHASFQAAAR SPLRPTPVVA ENSP00000355870/1-488 HAGVGDLGAA PEGLAGASAA ALTAHLGSVH PHASFQAAAR SPLRPTPVVA 101 150 BACU004027/1-584 PSEVPAGFPP RLSPLSAAYH HHHPQQPPQQ QQPQQQQPLP PPRAGSLQPP bmy_10577T0/1-486 PSEVPAGFPP RLSPLSAAYH HHHPQQPPQQ QQPQQQQPPP PPRAGGLQPP ENSBTAP00000019352/1-486 PSEVPAGFPQ RLSPLSAAYH HHHPQQQQQQ QQPQQQQPPP PPRAGALQPP ENSP00000355870/1-488 PSEVPAGFPQ RLSPLSAAYH HHHPQQQQQQ QQPQQQQPPP PPRAGALQPP 151 200 BACU004027/1-584 ASGSRLVPNP HHSASAPAPS SKDLKFGIDR ILSAEFDPKV KEGNTLRDLT bmy_10577T0/1-486 ASGSRLVPNP HHSASAPAPS SKDLKFGIDR ILSAEFDPKV KEGNTLRDLT ENSBTAP00000019352/1-486 ASGSRVVPNP HQSGSAPAPS SKDLKFGIDR ILSAEFDPKV KEGNTLRDLT ENSP00000355870/1-488 ASGTRVVPNP HHSGSAPAPS SKDLKFGIDR ILSAEFDPKV KEGNTLRDLT 201 250 BACU004027/1-584 SLLTGGRPAG MHLPALQPST GQFFASLDPI NEASAILSPL SSNPRNSVQH bmy_10577T0/1-486 SLLTGGRPAG MHLPALQPST GQFFASLDPI NEASAILSPL SSNPRNSVQH ENSBTAP00000019352/1-486 SLLTGGRPAG VHLPGLQPSA GQFFASLDPI NEASAILSPL SSNPRNSVQH ENSP00000355870/1-488 SLLTGGRPAG VHLSGLQPSA GQFFASLDPI NEASAILSPL NSNPRNSVQH 251 300 BACU004027/1-584 QFQDTFPGPY AVLTKDTMPQ TYKRKRSWSR AVFSNLQRKG LEKRFEIQKY bmy_10577T0/1-486 QFQDTFPGPY AVLTKDTMPQ TYKRKRSWSR AVFSNLQRKG LEKRFEIQKY ENSBTAP00000019352/1-486 QFQDTFPGPY AVLTKDTMPQ TYKRKRSWSR AVFSNLQRKG LEKRFEIQKY ENSP00000355870/1-488 QFQDTFPGPY AVLTKDTMPQ TYKRKRSWSR AVFSNLQRKG LEKRFEIQKY 301 350 BACU004027/1-584 VTKPDRKQLA AMLGLTDAQV KVWFQNRRMK WRHSKEAQAQ KDKDKEAGEK bmy_10577T0/1-486 VTKPDRKQLA AMLGLTDAQV KVWFQNRRMK WRHSKEAQAQ KDKDKEAGEK ENSBTAP00000019352/1-486 VTKPDRKQLA AMLGLTDAQV KVWFQNRRMK WRHSKEAQAQ KDKDKEAGEK ENSP00000355870/1-488 VTKPDRKQLA AMLGLTDAQV KVWFQNRRMK WRHSKEAQAQ KDKDKEAGEK 351 400 BACU004027/1-584 PSGGVPAGDG EQEERSPSRS EGEAESEXXX XXXXXXXXXX XXXXXXXXXX bmy_10577T0/1-486 PSGGAPAGDG EQEERSPSRS EGEAESESSD SESLDMAPSD TERTEGAERS ENSBTAP00000019352/1-486 PSGGAPAPDG EPEERSPSRS EGEAESESSD PESLDMAPSD TERTEGTERS ENSP00000355870/1-488 PSGGAPAADG EQDERSPSRS EGEAESESSD SESLDMAPSD TERTEGSERS 401 450 BACU004027/1-584 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10577T0/1-486 LHQTTVIKAS AAGALLAASS GGSAGSGGGG ---FNFGVLS --SGSTGGAG ENSBTAP00000019352/1-486 LHQTTVIKAS AAGALLAASS GGSGGSGGGG GGGFNFGGLS --SGSTTSAG ENSP00000355870/1-488 LHQTTVIKAP VTGALITASS AGSGGSSGGG GNSFSFSSAS SLSSSSTSAG 451 500 BACU004027/1-584 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10577T0/1-486 SSG------- ---------- ---------- ---------- ---------- ENSBTAP00000019352/1-486 SSG------- ---------- ---------- ---------- ---------- ENSP00000355870/1-488 CAS------- ---------- ---------- ---------- ---------- 501 550 BACU004027/1-584 XXXXXXXXXX XXXXXXXXXX XXXXXTFQWR RGQGRRLSGG VPARASLPRP bmy_10577T0/1-486 ---------- ---------- ---------- -GQGSCSGGG ASELLPAPQP ENSBTAP00000019352/1-486 ---------- ---------- ---------- -SH---SSGG ASELLPAPQP ENSP00000355870/1-488 ---------- ---------- ---------- -SL---GGGG ASELLPATQP 551 600 BACU004027/1-584 VQPTPPRAEG NRSASRQAPS AGGTLLPGYK QLAL bmy_10577T0/1-486 ALGSAPK--- ---SPEPAPA PLGGL----- ---- ENSBTAP00000019352/1-486 SLSSAPK--- ---SPEPVPA PLGGL----- ---- ENSP00000355870/1-488 TASSAPK--- ---SPEPAQG ALGCL----- ----