KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:07:33 2014 Check: 00 .. Name: ENSP00000354848/1-621 Len: 621 Check: 2821 Weight: 1.00 Name: ENSBTAP00000019353/1-621 Len: 621 Check: 3034 Weight: 1.00 Name: bmy_04416T0/1-579 Len: 621 Check: 7744 Weight: 1.00 Name: ENSTTRP00000015545/1-619 Len: 621 Check: 7980 Weight: 1.00 // 1 50 ENSP00000354848/1-621 MANVPWAEVC EKFQAALALS RVELHKNPEK EPYKSKYSAR ALLEEVKALL ENSBTAP00000019353/1-621 MADSPWDEIR EKFQTALALS RVELHKNPEK EPYKSKYSAR ALLEEVKALL bmy_04416T0/1-579 MADAPWAEIR EKFQAALALS RVELHKNPEK EPYKSKYSAR ALLEEVKALL ENSTTRP00000015545/1-619 MADAPWAEIR EKFQAALALS RVELHKNPEK EPYKSKYSAR ALLEEVKALL 51 100 ENSP00000354848/1-621 GPAPEDEDER PEAEDGPGAG DHALGLPAEV VEPEGPVAQR AVRLAVIEFH ENSBTAP00000019353/1-621 GPAPEDEDER PQADDSLGAG EHALGLPAEL VEAEGPVAQG AVRRAVIEFH bmy_04416T0/1-579 GPAPEDEDER PQADDSLGAG DHALGLPAEL VEAEGPVAQG AVRRAVIEFH ENSTTRP00000015545/1-619 GPAPEDEDER PQADDSLGAG DHALGLPAEL VEAEGPVAQG AVRRAVIEFH 101 150 ENSP00000354848/1-621 LGVNHIDTEE LSAGEEHLVK CLRLLRRYRL SHDCISLCIQ AQNNLGILWS ENSBTAP00000019353/1-621 LGVNHIDTEE LSAGEEHLVK CLRLLRKYRL SHDCVSLYIQ AQNNLGILWS bmy_04416T0/1-579 LGVNHIDTEE LSAGEEHLVK CLRLLRKYRL SHDCVSLYIQ AQNNLGILWS ENSTTRP00000015545/1-619 LGVNHIDTEE LSAGEEHLVK CLRLLRKYRL SHDCVSLYIQ AQNNLCILWS 151 200 ENSP00000354848/1-621 EREEIETAQA YLESSEALYN QYMKEVGSPP LDPTERFLPE EEKLTEQERS ENSBTAP00000019353/1-621 EREEIETAQA YLESSEALYN QYMKEIGSPP LDPTEHFLPE EEKLPEQERS bmy_04416T0/1-579 EREEIETAQA YLESSEALYN QYMKEIGSPP LDPTEHFLPE EEKLAEQERS ENSTTRP00000015545/1-619 EREEIETAQA YLESSEALY- QYM-EIGSPP LDPTEHFLPE EEKLAEQERS 201 250 ENSP00000354848/1-621 KRFEKVYTHN LYYLAQVYQH LEMFEKAAHY CHSTLKRQLE HNAYHPIEWA ENSBTAP00000019353/1-621 KRFEKVYTHN LYYLAQVYQH MEMFEKAAHY CHSTLKRQLE HNAYHPMEWA bmy_04416T0/1-579 K--------- ---------- ---------- --STLKRQLE HNAYHPMEWA ENSTTRP00000015545/1-619 KRFEKVYTHN LYYLAQVYQH MEMFEKAAHY CHSTLKRQLE HNAYHPMEWA 251 300 ENSP00000354848/1-621 INAATLSQFY INKLCFMEAR HCLSAANVIF GQTGKISATE DTPEAEGEVP ENSBTAP00000019353/1-621 INAATLSQFY INKQCFMEAR HCLSAANVIF GQIGKIRTTE DTTEAEGDVP bmy_04416T0/1-579 INAATLSQFY INKQCFMEAR HCLSAANVIF ---------- -ATEAEGDVP ENSTTRP00000015545/1-619 INAATLSQFY INKQCFMEAR HCLSAANVIF GQTGKIRTTE DTTEAEGDVP 301 350 ENSP00000354848/1-621 ELYHQRKGEI ARCWIKYCLT LMQNAQLSMQ DNIGELDLDK QSELRALRKK ENSBTAP00000019353/1-621 ELYHQRKGEI ARCWIKYCLT LMQNAQLSMQ DNIGELDLDK QSELRALRKK bmy_04416T0/1-579 ELYHQRKGEI ARCWIKYCLT LMQNAQLSMQ DNIGELDLDK QSELRALRKK ENSTTRP00000015545/1-619 ELYHQRKGEI ARCWIKYCLT LMQNAQLSMQ DNIGELDLDK QSELRGLRKK 351 400 ENSP00000354848/1-621 ELDEEESIRK KAVQFGTGEL CDAISAVEEK VSYLRPLDFE EARELFLLGQ ENSBTAP00000019353/1-621 ELDEEESVRK KAVQFGTGEL CDAISAVEEK VSYLRPLDFE EARELFLTGQ bmy_04416T0/1-579 ELDEEESVRK KAVQFGTGEL CDAISAVEEK VSYLRPSDFE EARELFLMGQ ENSTTRP00000015545/1-619 ELDEEESVRK KAVQFGTGEL CDAISAVEEK VSYLRPSDFE EARELFLMGQ 401 450 ENSP00000354848/1-621 HYVFEAKEFF QIDGYVTDHI EVVQDHSALF KVLAFFETDM ERRCKMHKRR ENSBTAP00000019353/1-621 HYVFEAKEFF QIDGYVTDHI EVVQDHSALF KVLAFFETDM ERRCKMHKRR bmy_04416T0/1-579 HYVFEAKEFF QIDGYVTDHI EVVQDHSALF KVLAFFETDM ERRCKMHKRR ENSTTRP00000015545/1-619 HYVFEAKEFF QIDGYVTDHI EVVQDHSALF KVLAFFETDM ERRCKMHKRR 451 500 ENSP00000354848/1-621 IAMLEPLTVD LNPQYYLLVN RQIQFEIAHA YYDMMDLKVA IADRLRDPDS ENSBTAP00000019353/1-621 IAMLEPLIVD LNPQYYLLVN RQIQFEIAHA YYDMMDLKVA IADKLRDPDS bmy_04416T0/1-579 IAMLEPLIVD LNPQYYLLVN RQIQFEVAHA YYDMMDLKIA IADKLRDPDS ENSTTRP00000015545/1-619 IAMLEPLIVD LNPQYYLLVN RQIQFEVAHA YYDMMDLKIA IADKLRDPDS 501 550 ENSP00000354848/1-621 HIVKKINNLN KSALKYYQLF LDSLRDPNKV FPEHIGEDVL RPAMLAKFRV ENSBTAP00000019353/1-621 HIVKKINNLN KSALKYYQLF LDSLRDPNKV FPEHIGEDVL RPAMLAKFRV bmy_04416T0/1-579 HIVKKINSLN KSALKYYQLF LDSLRDPNKV FPEHIGEDVL RPAMLAKFRV ENSTTRP00000015545/1-619 HIVKKINSLN KSALKYYQLF LDSLRDPNKV FPEHIGEDVL RPAMLAKFRV 551 600 ENSP00000354848/1-621 ARLYGKIITA DPKKELENLA TSLEHYKFIV DYCEKHPEAA QEIEVELELS ENSBTAP00000019353/1-621 ARLYGKIITA DPKKELENLA TSLEHYKFIV DYCEKHPEAA QEIEVELELS bmy_04416T0/1-579 ARLYGKIITA DPKKELENLA TSLEHYKFIV DYCEKHPEAA QEIEVELELS ENSTTRP00000015545/1-619 ARLYGKIITA DPKKELENLA TSLEHYKFIV DYCEKHPEAA QEIEVELELS 601 650 ENSP00000354848/1-621 KEMVSLLPTK MERFRTKMAL T ENSBTAP00000019353/1-621 KEMVSLLPTK MERFRTKMAL T bmy_04416T0/1-579 KEMVSLLPTK MERFRTKMSL T ENSTTRP00000015545/1-619 KEMVSLLPTK MERFRTKMSL T