KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:34 2014 Check: 00 .. Name: BACU003794/1-277 Len: 393 Check: 8945 Weight: 1.00 Name: bmy_16523T0/1-199 Len: 393 Check: 1473 Weight: 1.00 Name: ENSP00000309640/1-393 Len: 393 Check: 5432 Weight: 1.00 Name: ENSTTRP00000014990/1-263 Len: 393 Check: 1841 Weight: 1.00 Name: ENSBTAP00000019358/1-393 Len: 393 Check: 3022 Weight: 1.00 // 1 50 BACU003794/1-277 MGLLRGAPPC ARAMARLGAV RSHYCALLLA AALAVCAFYY LGSGRETFSS bmy_16523T0/1-199 --MHRGGPPR VKPLVFFPLR HPLQCTAPPC RWSGSCS--- VGGQRVAF-- ENSP00000309640/1-393 MGLLRGGLPC ARAMARLGAV RSHYCALLLA AALAVCAFYY LGSGRETFSS ENSTTRP00000014990/1-263 -LVSPGALPC PRARRRPSAI LQN-CNLMLT DF----AVYA INLG------ ENSBTAP00000019358/1-393 MGLLRGGPPC ARAMARLGAV RSHYCALLLA AALAVCAFYY LGSGRETFSS 51 100 BACU003794/1-277 ATKRLKEARA GAPAAPSPPV PELPQGTVAP APGAEAKSLE EGGAGPVDYH bmy_16523T0/1-199 ---------- ---------- ---------- ---------- ---------- ENSP00000309640/1-393 ATKRLKEARA GAPAAPSPPA LELARGSVAP APGAKAKSLE GGGAGPVDYH ENSTTRP00000014990/1-263 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019358/1-393 ATKRLKEARA GAPAAPSPPV LELARGSLAP APGAKAKSLE GGGAGPPGSS 101 150 BACU003794/1-277 LLMMFTKAEH NAALQAKARV ALRSLLRLAK FEAHEVLNLH FVSEEASREV bmy_16523T0/1-199 ---------- ---------- ---------- ---------- ---------- ENSP00000309640/1-393 LLMMFTKAEH NAALQAKARV ALRSLLRLAK FEAHEVLNLH FVSEEASREV ENSTTRP00000014990/1-263 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019358/1-393 WFIIFRKEER NALWKKRVRS KLGRLVRLPV FYKHQLLNMY FKSEQVSVSA 151 200 BACU003794/1-277 AKALLRELLP PAAGFKCK-- -DTLSVCVAE SCPSLDTIPS SEPSKEPPFK bmy_16523T0/1-199 ---------- PGRGQSC--- -----FCYAA S-PTLRTLGK R-----GSWH ENSP00000309640/1-393 AKGLLRELLP PAAGFKCKVI FHDVAVLTDK LFPIVEAMQK HFSAGLGTYY ENSTTRP00000014990/1-263 ---------- --------VV FHDVGVLTDR LFPVVEAMQK HFSAGSGTYY ENSBTAP00000019358/1-393 GKGLLKSRLP GTAGPSCQVV FHDVGVLTDK LFPVVEAMQK HFSAGSGTYY 201 250 BACU003794/1-277 RHIFLFLV-- ---------- ---------- ---------- ----YLPGAV bmy_16523T0/1-199 ---------- ---------- ---------- ---------- ---------- ENSP00000309640/1-393 SDSIFFLSVA MHQIMPKEIL QIIQLDLDLK FKTNIRELFE EFDSFLPGAI ENSTTRP00000014990/1-263 SDSIFFLSVA MHQIMPKEIL RIIQLDLDLK YKTNIRELFE EFDNFLPGAV ENSBTAP00000019358/1-393 SDSIFFLSVA MHQIMPKEIL RIIQLDLDLK YKTNIRELFE EFDNFLPGAI 251 300 BACU003794/1-277 DCTTSYLPSL ---CLAHSGH QKYLSRAG-- -PVSGPASLL GACVSCFDSF bmy_16523T0/1-199 ---------- ---TFWQFRH ENPKTRVGGP PPEGLPGFNS GVMLLNLEAM ENSP00000309640/1-393 IGIAREMQPV YRHTFWQFRH ENPQTRVGGP PPEGLPGFNS GVMLLNLEAM ENSTTRP00000014990/1-263 IGIAREMQPV YRHTFWQFRH ENPKTRVGGP PPEGLPGFNS GVMLLNLEAM ENSBTAP00000019358/1-393 IGIAREMQPV YRHTFWQFRH DNPKTRVGSP PPEGLPGFNS GVMLLNLEAM 301 350 BACU003794/1-277 ---PLLGPVL TAIAITQ--- ---------- -------GLR QLQMT----- bmy_16523T0/1-199 RQSPLYGRLL EPAQVQQLAD KYHFRGHLGD QDFFTMIGME HPELFHVLDC ENSP00000309640/1-393 RQSPLYSRLL EPAQVQQLAD KYHFRGHLGD QDFFTMIGME HPKLFHVLDC ENSTTRP00000014990/1-263 RQSPLYGRLL EPAQVQQLAD KYHFRGHLGD QDFFTMIGME HPELFHVLDC ENSBTAP00000019358/1-393 RQSPLYDRLL EPAQVQQLAD KYHFRGHLGD QDFFTMIGME HPELFHVLDC 351 400 BACU003794/1-277 ---------- ---------- ---------- ---------- --- bmy_16523T0/1-199 TWNRQLCTWW RDHGYSDVFD AYFRCEGHVK IYHGNCNTPI PEA ENSP00000309640/1-393 TWNRQLCTWW RDHGYSDVFE AYFRCEGHVK IYHGNCNTPI PED ENSTTRP00000014990/1-263 TWNRQLCTWW RDHGYSDVFD AYFRCEGHVR IYHGNCNTPI PEA ENSBTAP00000019358/1-393 TWNRQLCTWW RDHGYSDVFD AYFRCEGHVK IYHGNCNTPI PEA