KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:36 2014 Check: 00 .. Name: ENSBTAP00000019405/1-417 Len: 426 Check: 1146 Weight: 1.00 Name: ENSP00000356925/1-426 Len: 426 Check: 7062 Weight: 1.00 Name: BACU003841/1-419 Len: 426 Check: 9382 Weight: 1.00 Name: ENSTTRP00000016204/1-426 Len: 426 Check: 3838 Weight: 1.00 Name: bmy_19876T0/1-279 Len: 426 Check: 6931 Weight: 1.00 // 1 50 ENSBTAP00000019405/1-417 MWELTVLLLL VPSSGQAATP EKPILSLHPP WTTIFKGEKV TLRCDGYHPL ENSP00000356925/1-426 MWPLTALLLL VPSSGQAATL EKPILSLHPP WTTIFKGERV TLKCDGYHPL BACU003841/1-419 MWELTALLLL -------ATL EKPILSLHPP WTTIFKGERV TLRCDGYHPL ENSTTRP00000016204/1-426 MWELTALLLL VPSSGQAATL EKPILSLHPP WTTIFKGERV TLRCDGYHPL bmy_19876T0/1-279 ---------- -PSSGQAATL EKPILSLHPP WTTIFKGERV TLRCDGYHPL 51 100 ENSBTAP00000019405/1-417 LLELRPISTL WYLGHLLLPS YKKSIEVHTP GVYRCQTRGA PVSDPIHLSV ENSP00000356925/1-426 LLELQPISTL WYLGHLLLPS HKKSIEVQTP GVYRCQTRGA PVSDPIHLSV BACU003841/1-419 LLELRPISTL WYLGHLLLPS HKKSIEVQTP GVYRCQTRGA PVSDPIHLSV ENSTTRP00000016204/1-426 LLELRPISTL WYLGHLLLPS HKKSIEVQTP GVYRCQTRGA PVSDPIHLSV bmy_19876T0/1-279 LLELRPISTL WYLGHLLLPS HKKSIEVQTP GVYRCQTRGA PVSDPIHLSV 101 150 ENSBTAP00000019405/1-417 SNDWLILQVP YAAVFEGEPL VMRCRGWYDK TVYKLHYYHD GQPVRYFHSS ENSP00000356925/1-426 SNDWLILQVP YAPVFEGEPL VLRCRGWYDK VVYKLHYYHD GQAVRYFHSS BACU003841/1-419 SNDWLILQVP YAAVFEGEPL VMRCRGWYDK VVYKLHYYHD GQPVRYFHSS ENSTTRP00000016204/1-426 SNDWLILQVP YAAVFEGEPL VMRCRGWYDK VVYKLHYYHD GQPVRYFHSS bmy_19876T0/1-279 SNDWLILQVP YAAVFEGEPL VMRCRGWYDK VVYKLHYYHD GQPVRYFHSS 151 200 ENSBTAP00000019405/1-417 ANYTVPQARA SDSGRYQCSG TMRIPVESAP MFSAKVAVTV QELFQEPVLR ENSP00000356925/1-426 ANYTVLQARA SDSGRYQCSG TMRIPVESAP MFSAKVAVTV QELFRAPVLR BACU003841/1-419 ANYTVPQARA SDSGRYQCSG TMRIPVESAP MFSAKVAVTV QELFQAPVLR ENSTTRP00000016204/1-426 ANYTVPQARA SDSGRYQCSG TMRIPVESAP MFSAKVAVTV QELFQAPVLK bmy_19876T0/1-279 ANYTVPQARA SDSGRYQCSG TMRIPVESAP MFSAKVAVTV QELFQAPVLR 201 250 ENSBTAP00000019405/1-417 VIGRVEARGG AFGGVVLRCE TRLHPQKRDT PLQFAFYKYS RPVRRYDWDA ENSP00000356925/1-426 VMGPREARGA ALGGVVLRCD TRLHPQKRDT PLQFAFYKYS RAVRRFDWGA BACU003841/1-419 VMGRVEARGA ALGGVVLRCE TLLHPQKRDT PLQFAFYKYS RAVRRFDWGA ENSTTRP00000016204/1-426 VMGRVEARGA ALGGVVLRCE TLLHPQKRDT PLQFAFYKYS RAVRRFDWGA bmy_19876T0/1-279 VMGRVEARGA ALGGVVLRCE TLLHPQKRDT PLQFAFYKYS RAVRRFDWGA 251 300 ENSBTAP00000019405/1-417 EYTVPEPEVE ELESYWCEAA TATRSVRKRS PWLQLPGRGS PLDLASTTAP ENSP00000356925/1-426 EYTVPEPEVE ELESYWCEAA TATRSVRKRS PWLQLPGPGS PLDPASTTAP BACU003841/1-419 EYTVPEPEVE ELESHWCEAA TTTRSVRKRS PWLQLPGRGS PLDVASTTVP ENSTTRP00000016204/1-426 EYTVPEPEVE ELESHWCEVA TASRSVRKRS PWLQLPGRGS PLDVASTTVP bmy_19876T0/1-279 EYTVPEPEVE ELESHWCEAT TATRSVRKRS PWLQLPGRGE ---------- 301 350 ENSBTAP00000019405/1-417 -------DPG NQPLSFRKPP VSRSVPSVPS VPNVTSAGPQ FPAGGAPTAG ENSP00000356925/1-426 APWAAALAPG NRPLSFRKPP VSRSVPLVTS VRNTTSTGLQ FPASGAPTAG BACU003841/1-419 VPQAAALAPG NKPLSFRKPP LSRSVPSVTS VPNTPSAGLL FPAGGGPTAG ENSTTRP00000016204/1-426 VPQAAALAPG NKPLSFRKPP LSISVPSVTS VPNTTSAGLL FPAGGAPTAG bmy_19876T0/1-279 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000019405/1-417 PPACAPPTPL QQTAGALKPD VALLLREMQL LQGLLSRVVL ELKETQPLPG ENSP00000356925/1-426 PPACAPPTPL EQSAGALKPD VDLLLREMQL LKGLLSRVVL ELKEPQALRE BACU003841/1-419 PPACAPLTPL EQTTGALKPD VDLLLREMQL LKDLLSRVVL ELKEPQAFPE ENSTTRP00000016204/1-426 PPACAPLTPL EQTTGALKPD MDLLLREMQL LKDLLSRVVL ELKEAQAFPE bmy_19876T0/1-279 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000019405/1-417 H--TVETPTS HSAVSQGTPE TTTVES ENSP00000356925/1-426 LRGTPETPTS HFAVSPGTPE TTPVES BACU003841/1-419 PRDTLETPAS HFAVSQGTPE TAAVES ENSTTRP00000016204/1-426 HRDTLETPAS HFAVSQGTPE TTAVES bmy_19876T0/1-279 ---------- ---------- ------