KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:47 2014 Check: 00 .. Name: ENSP00000292385/1-651 Len: 1142 Check: 2035 Weight: 1.00 Name: ENSBTAP00000019445/1-660 Len: 1142 Check: 7537 Weight: 1.00 Name: BACU002884/1-1141 Len: 1142 Check: 2666 Weight: 1.00 Name: ENSTTRP00000009079/1-705 Len: 1142 Check: 9398 Weight: 1.00 Name: bmy_08371T0/1-689 Len: 1142 Check: 1360 Weight: 1.00 // 1 50 ENSP00000292385/1-651 ---------- --MAGHPWHG TAAL------ ---------- ---------- ENSBTAP00000019445/1-660 -------MAG VSFSGHRLEL LAAY------ ---------- ---------- BACU002884/1-1141 MDSFKVVLEG PAPWGFRLQG GKDFNVPLSI SRLTPGGKAA QAGVAVGDWV ENSTTRP00000009079/1-705 -------MAG VSFSGHRLEL LAAY------ ---------- ---------- bmy_08371T0/1-689 ---------- ---------- ---Y------ ---------- ---------- 51 100 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019445/1-660 ---------- ------EEVI RE-------- ---------- ---------- BACU002884/1-1141 LSIDGENAGG LTHIEAQNKI RACGEHLSLG LSRAQPPQSK PQKALASAAD ENSTTRP00000009079/1-705 ---------- ------EEVI RE-------- ---------- ---------- bmy_08371T0/1-689 ---------- ------EEVI RE-------- ---------- ---------- 101 150 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------A ENSBTAP00000019445/1-660 ---------- ---------- ---------- ---------- ---------E BACU002884/1-1141 PPRYTFAPSA SLNKTARPFG APQPADSAPQ QNGQPLRPLV PDASKQRLME ENSTTRP00000009079/1-705 ---------- ---------- ---------- ---------- ---------E bmy_08371T0/1-689 ---------- ---------- ---------- ---------- ---------E 151 200 ENSP00000292385/1-651 SSQAWRDGRE RQALVSCR-- ---------- ---------- ---------- ENSBTAP00000019445/1-660 SAADW----- ---------- ---------- ---------- ---------- BACU002884/1-1141 DTEDWRPRPG TGQSRSFRIL AHLTGTEFMQ DPDEEHLKKS REKYVLELQS ENSTTRP00000009079/1-705 SAADW----- ---------- ---------- ---------- ---------- bmy_08371T0/1-689 SAADW----- ---------- ---------- ---------- ---------- 201 250 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019445/1-660 ---------- ---------- ---------- ---------- ---------- BACU002884/1-1141 PRYTRLRDWH HQRSAHVLNV QSPTSRPPWA VDPAFAERYA PDKTSTVLTR ENSTTRP00000009079/1-705 ---------- ---------- ---------- ---------- ---------- bmy_08371T0/1-689 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019445/1-660 ---------- ---------- ---------- ---------- ---------- BACU002884/1-1141 HTQPATPTPM QNRTSIVQAA AGGGPGGSGG SNGKTPVCHQ CHKVIRGRYL ENSTTRP00000009079/1-705 ---------- ---------- ---------- ---------- ---------- bmy_08371T0/1-689 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019445/1-660 ---------- ---------- ---------- ---------- ---------- BACU002884/1-1141 VALGHAYHPE EFVCSQCGKV LEEGGFFEEK GAVFCPPCYD VRYAPSCAKC ENSTTRP00000009079/1-705 ---------- ---------- ---------- ---------- ---------- bmy_08371T0/1-689 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019445/1-660 ---------- ---------- ---------- ---------- ---------- BACU002884/1-1141 KKKITGEIMH ALKMTWHVHC FTCAACKTPI RNRAFYMEEG APYCERDYEK ENSTTRP00000009079/1-705 ---------- ---------- ---------- ---------- ---------- bmy_08371T0/1-689 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000292385/1-651 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019445/1-660 ---------- ---------- ---------- ---------- ---------- BACU002884/1-1141 MFGTKCRGCD FKIDAGDRFL EALGFSWHDT CFVCAICQIN LEGKTFYSKK ENSTTRP00000009079/1-705 ---------- ---------- ---------- ---------- ---------- bmy_08371T0/1-689 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000292385/1-651 ---------- ---ALYTYED GSDDLKLAAS GEGGLQELSG HFENQKVMYG ENSBTAP00000019445/1-660 ---------- ---ALYTYED GSDDLKLAAS GDGGLQELSG HFENQRVMYG BACU002884/1-1141 DKPLCKSHAF SHVALYTYED GSDDLKLAAS GDGGLQELSG HFENQKVMYG ENSTTRP00000009079/1-705 ---------- ---ALYTYED GSDDLKLAAS GDGGLQELSG HFENQKVMYG bmy_08371T0/1-689 ---------- ---ALYTYED GSDDLKLAAS GDGGLQELSG HFENQKVMYG 501 550 ENSP00000292385/1-651 FCSVKDSQAA LPKYVLINWV GEDVPDARKC ACASHVAKVA EFFQGVDVIV ENSBTAP00000019445/1-660 FCSVKDSQAA LPKYVLINWV GEDVPDARKC ACASHVAKVA EFFQGVDVIV BACU002884/1-1141 FCSVKDSQAA LPKYVLINWV GEDVPDARKC ACASHVAKVA EFFQGVDVIV ENSTTRP00000009079/1-705 FCSVKDSQAA LPKYVLINWV GEDVPDARKC ACASHVAKVA EFFQGVDVIV bmy_08371T0/1-689 FCSVKDSQAA LPKYVLINWV GEDVPDARKC ACASHVAKVA EFFQGVDVIV 551 600 ENSP00000292385/1-651 NASSVEDIDA GAIGQRLSNG LARLSSPVLH RLRLREDENA EPVGTTYQKT ENSBTAP00000019445/1-660 NASSVEDIDA GAIGQRLSNG LARLSSPVLH RLRLREDENA EPVGTTYQKT BACU002884/1-1141 NASSVEDIDA GAIGQRLSNG LARLSSPVLH RLRLREDENA EPVGTTYQKT ENSTTRP00000009079/1-705 NASSVEDIDA GAIGQRLSNG LARLSSPVLH RLRLREDENA EPVGTTYQKT bmy_08371T0/1-689 NASSVEDIDA GAIGQRLSNG LARLSSPVLH RLRLREDENA EPVGTTYQKT 601 650 ENSP00000292385/1-651 DAAVEMKRIN REQFWEQAKK EEELRKEEER KKALDERLRF EQERMEQERQ ENSBTAP00000019445/1-660 DAAVEMKRIN REQFWEQAKK EEELRKEEER KKALDERLRF EQERMEQERQ BACU002884/1-1141 DAAVEMKRIN REQFWEQAKK EEELRKEEER KKALDERLRF EQERMEQERQ ENSTTRP00000009079/1-705 DAAVEMKRIN REQFWEQAKK EEELRKEEER KKALDERLRF EQERMEQERQ bmy_08371T0/1-689 DAAVEMKRIN REQFWEQAKK EEELRKEEER KKALDERLRF EQERMEQERQ 651 700 ENSP00000292385/1-651 EQEERERRYR EREQQIEEHR RKQQTLEAEE AKRRLKEQSI FGDHRDEEEE ENSBTAP00000019445/1-660 EQEERERRYR EREQQIEEHR RKQQTLEAEE AKRRLKEQSI FGDQRDEEEE BACU002884/1-1141 EQEERERRYR EREQQIEEHR RKQQTLEAEE AKRRLKEQSI FGDQRDEEEE ENSTTRP00000009079/1-705 EQEERERRYR EREQQIEEHR RKQQTLEAEE AKRRLKEQSI FGDQRDEEEE bmy_08371T0/1-689 EQEERERRYR EREQQIEEHR RKQQTLEAEE AKRRLKEQSI FGDQRDEEEE 701 750 ENSP00000292385/1-651 THMKKSESEV EEAAAIIAQR PDNPREFFKQ QERVASASAG SCDVPSPFNH ENSBTAP00000019445/1-660 TQMKKSESEV EEAAAIIAQR PDNPREFFKQ QERVASASAG SCDVPSPFNH BACU002884/1-1141 TQMKKSESEV EEAAAIIAQR PDNPREFFKQ QERVASASAG SCDVPSPFNH ENSTTRP00000009079/1-705 TQMKKSESEV EEAAAIIAQR PDNPREFFKQ QERVASASAG SCDVPSPFNH bmy_08371T0/1-689 TQMKKSESEV EEAAAIIAQR PDNPREFFKQ QERVASASVG SCDVPSPFNH 751 800 ENSP00000292385/1-651 RPG------- ---------- ---------- ---------- ---------S ENSBTAP00000019445/1-660 RPG------- ---------- ---------- ---------- ---------S BACU002884/1-1141 RPGRPYCPFI KASDSGPSSS SSSSSSPPRT PFPYITCHRT PNLSSSLPCS ENSTTRP00000009079/1-705 RPGRPYCPFI KASDSGPSSS SSSSSSPPRT PFPYITCHRT PNLSSSLPCS bmy_08371T0/1-689 RPGRPYCPFI KASDSGPSSS SSSSSSPPRT PFPYITCHRT PNLSSSLPCS 801 850 ENSP00000292385/1-651 HLDSHRRMAP TPIPTRSPSD SSTASTPVAE QIERALDEVT SSQPPPLPPP ENSBTAP00000019445/1-660 HLDSHRRMIP TPLPARSPSD SSTASTPVAE QIERALDEVT SSQPPPLPPP BACU002884/1-1141 HLDSHRRMVP TPIPARSPSD SSMASTPVTE QIERALDEVM SSQPPPLPPP ENSTTRP00000009079/1-705 HLDSHRRMVP TPIPARSPSD SSMASTPVTE QIERALDEVT SSQPPPLPPP bmy_08371T0/1-689 HLDSHRRMVP TPIPARSPSD SSMASTPVTE QIERALDEVM SSQPPPLPPP 851 900 ENSP00000292385/1-651 PPPAQETQEP SPILDSEET- ---RAAAPQA WAGPMEEPPQ AQAPPRGPGS ENSBTAP00000019445/1-660 PPAAQETQEP SLSLDSEETS KEARAAAPQA RAGPLEESPQ ASEPPEGQGS BACU002884/1-1141 PPAAQETQEP SPGLDSEETC KEARAADPQA WASPLEESPQ APEPPQGQGS ENSTTRP00000009079/1-705 PPAAQETQEP SPSLDSEETS KEARAADPQA WASPLEESPQ APEPPQGQGS bmy_08371T0/1-689 PPAAQETQEP SPGLDSEETC KEARAADPQA WASPLEESPQ APEPPQGQGS 901 950 ENSP00000292385/1-651 P-AEDLMFME SAEQAVLAAP VEPATADATE IHD-AADTIE TDTATADTTV ENSBTAP00000019445/1-660 PMEEDLMFVA STEQADLAAS LEPAMAGASA ADSPVADAIE TDTAVADTAV BACU002884/1-1141 P-TEDLMFMA STEQAVLAAS LEPAMAGASA ADTPAADAVE TDTAAADTSV ENSTTRP00000009079/1-705 P-TEDLMFMA STEEAVLAAS LEPAMAGASA ADTPAADAIE TDAAAADTSV bmy_08371T0/1-689 P-TEDLMFMA STEQAVLAAS LEPAMAGASV ADTPAADAIE TDTAAADTSV 951 1000 ENSP00000292385/1-651 ANNVPPAATS LIDLWPGNGE GASTLQGEPR APTPPSGTEV TLAEVPLLDE ENSBTAP00000019445/1-660 ANTVTPAAAS LIDLWPGNGE GASAPQAEPR APTPPSGAEV MLAEVPLLDE BACU002884/1-1141 ANTVTPATAS LIDLWPGNGE GASVPQAEPR APTPPSGAEV TLAEVPLLDE ENSTTRP00000009079/1-705 ANTVTPATAS LIDLWPGNGE GASVPQAEPR APTPPSGAEV TLAEVPLLDE bmy_08371T0/1-689 ANTVTPATAS LIDLWPGNGE GASVPQAEPR APTPPSGAEV TLAEVPLLDE 1001 1050 ENSP00000292385/1-651 VAPEPLLPAG EGCATLLNFD ELPEPPATFC DP-EEVEGES LAAPQTPTLP ENSBTAP00000019445/1-660 VAQEPLLPAG EGSANLLSFD ELPEPPATFC DPGEEVGGEP LAAPQAPTLP BACU002884/1-1141 VAQEPLPPAG ESSANLLNFD ELPEPPATFC DPGEEVEGEP LAAPQAPTLP ENSTTRP00000009079/1-705 VAQEPLPPAG EGSANLLNFD ELPEPPATFC DPGEEVEGEP LAAPQAPTLP bmy_08371T0/1-689 VAQEPLPPAG EGSANLLNFD ELPEPPATFC DPGEEVEGEP LAAPQAPTLP 1051 1100 ENSP00000292385/1-651 SALEELEQ-- ----EQEPEP HLLTNGETTQ KEGTQASEGY FSQSQEEEFA ENSBTAP00000019445/1-660 SALEELDQ-- KLEPELEPEP HLLTNGETTQ KEGTQASEGY FSQSQEEEFV BACU002884/1-1141 SALEELDQEP EPEPELEPEP HLLTNGETTQ KEGTQASEGY FSQSQEEEFA ENSTTRP00000009079/1-705 SALEELDQ-- EPEPELEPEP QLLTNGETTQ KEGTQASEGY FSQSQEEEFA bmy_08371T0/1-689 SALEELDQ-- EPEPELEPEP HLLTNGETTQ KEGTQASEGY FSQSQEEEFA 1101 1150 ENSP00000292385/1-651 QSEELCAKAP PPVFYNKPPE IDITCWDADP VPEEEEGFEG GD ENSBTAP00000019445/1-660 QSEELCAKAP PPVFYNKPPE IDITCWDADP VPEEEEGFEG GD BACU002884/1-1141 QSEELCAKAP PPMFYNKPPE IDITCWDADP VPEEEEGFEG GD ENSTTRP00000009079/1-705 QSEELCAKAP PPMFYNKPPE IDITCWDADP GPEEEEGFEG GD bmy_08371T0/1-689 QSEELCAKAP PPMFYNKPPE IDITCWDADP VPEEEEGFEG GD