KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:07:54 2014 Check: 00 .. Name: ENSP00000304286/1-378 Len: 382 Check: 8123 Weight: 1.00 Name: ENSBTAP00000019467/1-379 Len: 382 Check: 9119 Weight: 1.00 Name: ENSTTRP00000002043/1-371 Len: 382 Check: 2444 Weight: 1.00 Name: bmy_06218T0/1-378 Len: 382 Check: 7132 Weight: 1.00 Name: BACU003690/1-378 Len: 382 Check: 7165 Weight: 1.00 // 1 50 ENSP00000304286/1-378 MSSFDLPAPS PPRCSPQFPS IGQEPPEMNL YYENFFHPQG VPSPQR-PSF ENSBTAP00000019467/1-379 MSSFDLPAPS PPRCSPQFPS LGQEPPEMNL YYENFFHPQG APSPQRPPSF ENSTTRP00000002043/1-371 -MSFD---PA PSRCSPQFPS IGQEPPEMNL YYENFFHPQG VPSPQR-PSF bmy_06218T0/1-378 MSSFDLPAPS PPRCSPQFPS IGQEPPEMNL YYENFFHPQG VPSPQRPPSF BACU003690/1-378 MSSFDLPAPS PPRCSPQFPS IGQEPPEMNL YYENFFHPQG VPSPQRPPSF 51 100 ENSP00000304286/1-378 EGGGEYGATP NPYLWFNGPT MTPPPYLPGP NASPFLPQAY -GVQRPLLP- ENSBTAP00000019467/1-379 EGGGEYGAAP NPYLWLNGPA VTPPPYLPG- -GSPFLPQAY GGVQRQLLPT ENSTTRP00000002043/1-371 ESGGEYEPTP NPYLL--GPA MTPPPYLPVA SASPFLPQTY -GVQRQLLP- bmy_06218T0/1-378 EGGGEYGATP NPYLWLNGPA MTPPPYLPGA SGSPFLPQAY -GVQRQLLP- BACU003690/1-378 EGGGEYGTTP NPYLWLNGPA MTPPPYLPGA SASPFLPQTY -GVQRQLLP- 101 150 ENSP00000304286/1-378 SVSGLGGSDL GWLPIPSQEE LMKLVRPPYS YSALIAMAIH GAPDKRLTLS ENSBTAP00000019467/1-379 GMPTLGAGDL GWLPLPSQEE LMKLVRPPYS YSALIAMAIH GAPDKRLTLS ENSTTRP00000002043/1-371 GVSGLGGGDL GWLPIPSQEE LMKLVRPPYS YSALIAMAIH GAPDRRLTLS bmy_06218T0/1-378 GVSGLGGGDL GWLPIPSQEE LMKLVRPPYS YSALIAMAIH GAPDRRLTLS BACU003690/1-378 GVSGLGGGDL GWLPIPSQEE LMKLVRPPYS YSALIAMAIH GAPDRRLTLS 151 200 ENSP00000304286/1-378 QIYQYVADNF PFYNKSKAGW QNSIRHNLSL NDCFKKVPRD EDDPGKGNYW ENSBTAP00000019467/1-379 QIYQYVADNF PFYNKSKAGW QNSIRHNLSL NDCFKKVPRD EDDPGKGNYW ENSTTRP00000002043/1-371 QIYQYVADNF PFYNKSKAGW QNSIRHNLSL NDCFKKVPRD EDDPGKGNYW bmy_06218T0/1-378 QIYQYVADNF PFYNKSKAGW QNSIRHNLSL NDCFKKVPRD EDDPGKGNYW BACU003690/1-378 QIYQYVADNF PFYNKSKAGW QNSIRHNLSL NDCFKKVPRD EDDPGKGNYW 201 250 ENSP00000304286/1-378 TLDPNCEKMF DNGNFRRKRK RKSDVSSSTA SLALEKTESS LPVDSPKTTE ENSBTAP00000019467/1-379 TLDPNCEKMF DNGNFRRKRK RKSDVSSSTG SMASEKTEAG LLAGSPKTAE ENSTTRP00000002043/1-371 TLDPNCEKMF DNGNFRRKRK RKSDVSSSTG SLASEKTEPS LLAGSPKTTE bmy_06218T0/1-378 TLDPNCEKMF DNGNFRRKRK RKSDVSSSTG SLASDKTEPS LLAGSPKTAE BACU003690/1-378 TLDPNCEKMF DNGNFRRKRK RKSDVSSSTG SLASEKTEPS LLAGSPKTAE 251 300 ENSP00000304286/1-378 PQDILDGASP GGTTSSPEKR PSPPPSGAPC LNSFLSSMTA YVSGGSPTSH ENSBTAP00000019467/1-379 AQDILDGAAP -GPTGSPEKQ PTPPPPGTPC LSSFLSTMSA YVSGPSPVSR ENSTTRP00000002043/1-371 AQDILDGASP -GPTSSPEKQ PSPPPPGTPC LNSFLSTMSA YVSGSSPVGR bmy_06218T0/1-378 AQDILDGASP -GTTSSPEKQ PSPPPPGTPC LNSFLSTMSA YVSGSSPMGR BACU003690/1-378 AQDILDGASP -GTTSSPEKQ PSPPPPGTPC LNSFLSTMSA YVSGSSPMGR 301 350 ENSP00000304286/1-378 PLV-TPGLSP EPSDKTGQNS LTFNSFSPLT NLSNHSGGGD WANPMPTNML ENSBTAP00000019467/1-379 PAATTPGLSL EPADKGGQNS LSFSSYTPLT NISGPVGGGE WASPMPSNAL ENSTTRP00000002043/1-371 PVA-TPGLSP EPADKVGQNL LNFNSYTPLT NFSGHAGGGE WASPTPSNAL bmy_06218T0/1-378 PVA-TPGLSP EPADKVGQNL LNFTSYTPLT NISGHAGGGE WASPTPSNAL BACU003690/1-378 PVA-TPGLSP EPADKVGQNL LNFNSYTPLT NISGHAGGGE WASPVPSNAL 351 400 ENSP00000304286/1-378 SYGGSVLSQF SPHFYNSVNT SGVLYPREGT EV ENSBTAP00000019467/1-379 GYGGSVLNQF SSPFYGSVST NSVLYPREGT EV ENSTTRP00000002043/1-371 GYGGSVLNQF SPHFYNSVNT NSILYPREGT EV bmy_06218T0/1-378 GYGGSVLNQF SPHFYNSVNT NSVLYPREGT EV BACU003690/1-378 GYGGSVLNQF SPHFYNSVNT NSILYPREGT EV